Literature DB >> 22535926

Complete genome sequence of the 2,3-butanediol-producing Klebsiella pneumoniae strain KCTC 2242.

Sang Heum Shin1, Sewhan Kim, Jae Young Kim, Soojin Lee, Youngsoon Um, Min-Kyu Oh, Young-Rok Kim, Jinwon Lee, Kap-Seok Yang.   

Abstract

Here we report the full genome sequence of Klebsiella pneumoniae KCTC 2242,consisting of a 5.26-Mb chromosome (57.6% GC%; 5,035 genes [4,923 encoding known proteins, 112 RNA genes]) and a 202-kb plasmid (50.2% GC%; 229 genes [229 encoding known proteins]).

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Year:  2012        PMID： 22535926      PMCID： PMC3347200          DOI： 10.1128/JB.00027-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  Evidence for regulation of Aerobacter aerogenes pH 6 acetolactate-forming enzyme by acetate ion.

Authors:  F C Stormer
Journal:  Biochem Biophys Res Commun       Date:  1977-02-07       Impact factor: 3.575

2.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

3.  Enhanced 2,3-butanediol production by Klebsiella pneumoniae SDM.

Authors:  Cuiqing Ma; Ailong Wang; Jiayang Qin; Lixiang Li; Xulu Ai; Tianyi Jiang; Hongzhi Tang; Ping Xu
Journal:  Appl Microbiol Biotechnol       Date:  2008-10-24       Impact factor: 4.813

4.  Development of a Mutant Strain of Bacillus polymyxa Showing Enhanced Production of 2,3-Butanediol.

Authors:  D H Mallonee; R A Speckman
Journal:  Appl Environ Microbiol       Date:  1988-01       Impact factor: 4.792

5.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

6.  High production of 2,3-butanediol from glycerol by Klebsiella pneumoniae G31.

Authors:  Kaloyan Petrov; Penka Petrova
Journal:  Appl Microbiol Biotechnol       Date:  2009-04-25       Impact factor: 4.813

7.  Effects of temperature, inoculum size and starch hydrolyzate concentration on butanediol production by Bacillus licheniformis.

Authors:  P Perego; A Converti; M Del Borghi
Journal:  Bioresour Technol       Date:  2003-09       Impact factor: 9.642

8.  NCBI Reference Sequences: current status, policy and new initiatives.

Authors:  Kim D Pruitt; Tatiana Tatusova; William Klimke; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2008-10-16       Impact factor: 16.971
  8 in total
  17 in total

1.  Draft genome sequence of Klebsiella pneumoniae subsp. pneumoniae DSM 30104T.

Authors:  Je Hee Lee; In Su Cheon; Byoung-Shik Shim; Dong Wook Kim; Suhng Wook Kim; Jongsik Chun; Manki Song
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490

2.  Plasmid-Mediated Antibiotic Resistance and Virulence in Gram-negatives: the Klebsiella pneumoniae Paradigm.

Authors:  Maria S Ramirez; German M Traglia; David L Lin; Tung Tran; Marcelo E Tolmasky
Journal:  Microbiol Spectr       Date:  2014

3.  Genome sequencing and comparative analysis of an NDM-1-producing Klebsiella pneumoniae ST15 isolated from a refugee patient.

Authors:  Tamara Salloum; Harout Arabaghian; Sahar Alousi; Edmond Abboud; Sima Tokajian
Journal:  Pathog Glob Health       Date:  2017-04-11       Impact factor: 2.894

4.  Improvement of 2,3-butanediol yield in Klebsiella pneumoniae by deletion of the pyruvate formate-lyase gene.

Authors:  Moo-Young Jung; Suman Mazumdar; Sang Heum Shin; Kap-Seok Yang; Jinwon Lee; Min-Kyu Oh
Journal:  Appl Environ Microbiol       Date:  2014-08-01       Impact factor: 4.792

5.  Enhanced nucleic acid amplification with blood in situ by wire-guided droplet manipulation (WDM).

Authors:  Dustin K Harshman; Roberto Reyes; Tu San Park; David J You; Jae-Young Song; Jeong-Yeol Yoon
Journal:  Biosens Bioelectron       Date:  2013-09-27       Impact factor: 10.618

Review 6.  Carbapenemase-producing Klebsiella pneumoniae: molecular and genetic decoding.

Authors:  Liang Chen; Barun Mathema; Kalyan D Chavda; Frank R DeLeo; Robert A Bonomo; Barry N Kreiswirth
Journal:  Trends Microbiol       Date:  2014-10-07       Impact factor: 17.079

7.  Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm.

Authors:  Aurélia Caputo; Vicky Merhej; Kalliopi Georgiades; Pierre-Edouard Fournier; Olivier Croce; Catherine Robert; Didier Raoult
Journal:  Biol Direct       Date:  2015-09-30       Impact factor: 4.540

8.  Comparative analysis of the complete genome of KPC-2-producing Klebsiella pneumoniae Kp13 reveals remarkable genome plasticity and a wide repertoire of virulence and resistance mechanisms.

Authors:  Pablo Ivan Pereira Ramos; Renata Christina Picão; Luiz Gonzaga Paula de Almeida; Nicholas Costa B Lima; Raquel Girardello; Ana Carolina P Vivan; Danilo E Xavier; Fernando G Barcellos; Marsileni Pelisson; Eliana C Vespero; Claudine Médigue; Ana Tereza Ribeiro de Vasconcelos; Ana Cristina Gales; Marisa Fabiana Nicolás
Journal:  BMC Genomics       Date:  2014-01-22       Impact factor: 3.969

9.  Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces.

Authors:  Jingwei Jiang; Hein Min Tun; Nathalie France Mauroo; Angel Po Yee Ma; San Yuen Chan; Frederick C Leung
Journal:  BMC Res Notes       Date:  2014-11-23

10.  Correlation of Klebsiella pneumoniae comparative genetic analyses with virulence profiles in a murine respiratory disease model.

Authors:  Ramy A Fodah; Jacob B Scott; Hok-Hei Tam; Pearlly Yan; Tia L Pfeffer; Ralf Bundschuh; Jonathan M Warawa
Journal:  PLoS One       Date:  2014-09-09       Impact factor: 3.240
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