Literature DB >> 22535375

Integrated epigenomics identifies BMP4 as a modulator of cisplatin sensitivity in gastric cancer.

Tatiana Ivanova1, Hermioni Zouridis, Yonghui Wu, Lai Ling Cheng, Iain Beehuat Tan, Veena Gopalakrishnan, Chia Huey Ooi, Julian Lee, Luo Qin, Jeanie Wu, Minghui Lee, Sun Young Rha, Dan Huang, Natalia Liem, Khay Guan Yeoh, Wei Peng Yong, Bin Tean Teh, Patrick Tan.   

Abstract

OBJECTIVE: Cisplatin is a widely used gastric cancer (GC) chemotherapy; however, genetic factors regulating GC responses to cisplatin remain obscure. Identifying genes regulating cisplatin resistance could aid clinicians in tailoring treatments, by distinguishing cisplatin sensitive patients from those who might benefit from alternative platinum therapies, and highlight novel targeted strategies for overcoming cisplatin resistance. Here integrated epigenomics is applied to identify genes associated with GC cisplatin resistance.
DESIGN: 20 GC cell lines were subjected to gene expression profiling, DNA methylation profiling and drug response assays. The molecular data were integrated to identify genes highly expressed and unmethylated specifically in cisplatin-resistant lines. Candidate genes were functionally tested by several in vitro and in vivo assays. Clinical impact of candidate genes was also assessed in a cohort of 197 GC patients.
RESULTS: Epigenomic analysis identified bone morphogenetic protein 4 (BMP4) as an epigenetically regulated gene highly expressed in cisplatin-resistant lines. Functional assays confirmed that BMP4 is necessary and sufficient for the expression of several prooncogenic traits, likely mediated through stimulation of the epithelial-mesenchymal transition. In primary tumours, BMP4 promoter methylation levels were inversely correlated with BMP4 expression, and patients with high BMP4-expressing tumours exhibited significantly worse prognosis. Therapeutically, targeted genetic inhibition of BMP4 caused significant sensitisation of GC cells to cisplatin. Notably, BMP4-expressing GCs also did not exhibit cross resistance to oxaliplatin.
CONCLUSIONS: BMP4 epigenetic and expression status may represent promising biomarkers for GC cisplatin resistance. Targeting BMP4 may sensitise GC cells to cisplatin. Oxaliplatin, a clinically acceptable cisplatin alternative, may represent a potential therapeutic option for BMP4-positive GCs.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22535375     DOI: 10.1136/gutjnl-2011-301113

Source DB:  PubMed          Journal:  Gut        ISSN: 0017-5749            Impact factor:   23.059


  47 in total

1.  Cancer: Integrated epigenomic analysis sheds light on role of BMP4 in regulating cisplatin sensitivity in gastric cancer.

Authors:  Natalie J Wood
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2012-05-22       Impact factor: 46.802

2.  RNF138 confers cisplatin resistance in gastric cancer cells via activating Chk1 signaling pathway.

Authors:  Yalan Lu; Deqiang Han; Wenjie Liu; Rong Huang; Jinhuan Ou; Xiaoqiao Chen; Xizhe Zhang; Xuezhi Wang; Shijun Li; Lin Wang; Changzheng Liu; Shiying Miao; Linfang Wang; Changwu Ma; Wei Song
Journal:  Cancer Biol Ther       Date:  2018-09-27       Impact factor: 4.742

Review 3.  Recent advances in the molecular diagnostics of gastric cancer.

Authors:  Mitsuro Kanda; Yasuhiro Kodera
Journal:  World J Gastroenterol       Date:  2015-09-14       Impact factor: 5.742

Review 4.  Methylation-mediated gene silencing as biomarkers of gastric cancer: a review.

Authors:  Jun Nakamura; Tomokazu Tanaka; Yoshihiko Kitajima; Hirokazu Noshiro; Kohji Miyazaki
Journal:  World J Gastroenterol       Date:  2014-09-14       Impact factor: 5.742

5.  Gene and microRNA expression reveals sensitivity to paclitaxel in laryngeal cancer cell line.

Authors:  Cheng-Zhi Xu; Jin Xie; Bin Jin; Xin-Wei Chen; Zhen-Feng Sun; Bao-Xing Wang; Pin Dong
Journal:  Int J Clin Exp Pathol       Date:  2013-06-15

6.  False discovery rate control for high dimensional networks of quantile associations conditioning on covariates.

Authors:  Jichun Xie; Ruosha Li
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2018-07-19       Impact factor: 4.488

Review 7.  Beyond TGFβ: roles of other TGFβ superfamily members in cancer.

Authors:  Lalage M Wakefield; Caroline S Hill
Journal:  Nat Rev Cancer       Date:  2013-05       Impact factor: 60.716

Review 8.  Exploring the role of molecular biomarkers as a potential weapon against gastric cancer: A review of the literature.

Authors:  Marwa Matboli; Sarah El-Nakeep; Nourhan Hossam; Alaa Habieb; Ahmed E M Azazy; Ali E Ebrahim; Ziad Nagy; Omar Abdel-Rahman
Journal:  World J Gastroenterol       Date:  2016-07-14       Impact factor: 5.742

9.  Epigenetic silencing of GDF1 disrupts SMAD signaling to reinforce gastric cancer development.

Authors:  W Yang; M T S Mok; M S M Li; W Kang; H Wang; A W Chan; J-L Chou; J Chen; E K W Ng; K-F To; J Yu; M W Y Chan; F K L Chan; J J Y Sung; A S L Cheng
Journal:  Oncogene       Date:  2015-07-27       Impact factor: 9.867

10.  A six-CpG panel with DNA methylation biomarkers predicting treatment response of chemoradiation in esophageal squamous cell carcinoma.

Authors:  Wei-Lun Chang; Wu-Wei Lai; I-Ying Kuo; Chien-Yu Lin; Pei-Jung Lu; Bor-Shyang Sheu; Yi-Ching Wang
Journal:  J Gastroenterol       Date:  2016-09-26       Impact factor: 7.527

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.