Literature DB >> 22528297

Real-time polymerase chain reaction assay for rapid and sensitive detection of anthrax spores in spiked soil and talcum powder.

Neha Jain1, S Merwyn, G P Rai, G S Agarwal.   

Abstract

Real-time polymerase chain reaction (real-time PCR) is a laboratory technique based on PCR. This technique is able to detect sequence-specific PCR products as they accumulate in "real time" during the PCR amplification, and also to quantify the number of substrates present in the initial PCR mixture before amplification begins. In the present study, real-time PCR assay was employed for rapid and real-time detection of Bacillus anthracis spores spiked in 0.1 g of soil and talcum powder ranging from 5 to 10(7) spores. DNA was isolated from spiked soil and talcum powder, using PBS containing 1 % Triton-X-100, followed by heat treatment. The isolated DNA was used as template for real-time PCR and PCR. Real-time PCR amplification was obtained in 60 min under the annealing condition at 60°C by employing primers targeting the pag gene of B. anthracis. In the present study, the detection limit of real-time PCR assay in soil was 10(3) spores and 10(2) spores in talcum powder, respectively, whereas PCR could detect 10(4) spores in soil and 10(3) spores in talcum powder, respectively.

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Year:  2012        PMID: 22528297     DOI: 10.1007/s12223-012-0117-6

Source DB:  PubMed          Journal:  Folia Microbiol (Praha)        ISSN: 0015-5632            Impact factor:   2.099


  30 in total

1.  Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores.

Authors:  Yan-Mei Qiao; Yong-Chao Guo; Xian-En Zhang; Ya-Feng Zhou; Zhi-Ping Zhang; Hong-Ping Wei; Rui-Fu Yang; Dian-Bing Wang
Journal:  Biotechnol Lett       Date:  2007-08-03       Impact factor: 2.461

Review 2.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

3.  Structural homology between virulence-associated bacterial adenylate cyclases.

Authors:  V Escuyer; E Duflot; O Sezer; A Danchin; M Mock
Journal:  Gene       Date:  1988-11-30       Impact factor: 3.688

4.  [The detection of Bacillus anthracis protective antigens by enzyme immunoassay (EIA) using polyclonal and monoclonal antibodies].

Authors:  C Kleine-Albers; R Böhm
Journal:  Zentralbl Veterinarmed B       Date:  1989-05

5.  Fluorescent detection techniques for real-time multiplex strand specific detection of Bacillus anthracis using rapid PCR.

Authors:  M A Lee; G Brightwell; D Leslie; H Bird; A Hamilton
Journal:  J Appl Microbiol       Date:  1999-08       Impact factor: 3.772

6.  Evaluation of five commercial nucleic acid extraction kits for their ability to inactivate Bacillus anthracis spores and comparison of DNA yields from spores and spiked environmental samples.

Authors:  Leslie A Dauphin; Benjamin D Moser; Michael D Bowen
Journal:  J Microbiol Methods       Date:  2008-09-13       Impact factor: 2.363

7.  Sensitive and rapid quantitative detection of anthrax spores isolated from soil samples by real-time PCR.

Authors:  Chunsun Ryu; Kyunghee Lee; Cheonkwon Yoo; Won Keun Seong; Hee-Bok Oh
Journal:  Microbiol Immunol       Date:  2003       Impact factor: 1.955

8.  Small-Scale DNA Sample Preparation Method for Field PCR Detection of Microbial Cells and Spores in Soil.

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-07-01       Impact factor: 4.792

9.  Sequence and analysis of the DNA encoding protective antigen of Bacillus anthracis.

Authors:  S L Welkos; J R Lowe; F Eden-McCutchan; M Vodkin; S H Leppla; J J Schmidt
Journal:  Gene       Date:  1988-09-30       Impact factor: 3.688

Review 10.  Molecular diagnosis of medical viruses.

Authors:  Rodney M Ratcliff; Grace Chang; TuckWeng Kok; Theo P Sloots
Journal:  Curr Issues Mol Biol       Date:  2007-07       Impact factor: 2.081

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