Literature DB >> 22528092

Cyclic amplification of prion protein misfolding.

Marcelo A Barria1, Dennisse Gonzalez-Romero, Claudio Soto.   

Abstract

Protein misfolding cyclic amplification (PMCA) is a technique that takes advantage of the nucleation-dependent prion replication process to accelerate the conversion of PrP(C) into PrP(Sc) in the test tube. PMCA uses ultrasound waves to fragment the PrP(Sc) polymers, increasing the amount of seeds present in the infected sample without affecting their ability to act as conversion nuclei. Over the past 5 years, PMCA has become an invaluable technique to study diverse aspects of prions. The PMCA technology has been used by several groups to understand the molecular mechanism of prion replication, the cellular factors involved in prion propagation, the intriguing phenomena of prion strains and species barriers, to detect PrP(Sc) in tissues and biological fluids, and to screen for inhibitors against prion replication. In this chapter, we describe a detailed protocol of the PMCA technique, highlighting some of the important technical aspects to obtain a successful and reproducible application of the technology.

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Year:  2012        PMID: 22528092      PMCID: PMC4068802          DOI: 10.1007/978-1-61779-551-0_14

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  65 in total

Review 1.  Prions: disease propagation and disease therapy by conformational transmission.

Authors:  C Soto; G P Saborío
Journal:  Trends Mol Med       Date:  2001-03       Impact factor: 11.951

2.  Sensitive detection of pathological prion protein by cyclic amplification of protein misfolding.

Authors:  G P Saborio; B Permanne; C Soto
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

Review 3.  Cyclic amplification of protein misfolding: application to prion-related disorders and beyond.

Authors:  Claudio Soto; Gabriela P Saborio; Laurence Anderes
Journal:  Trends Neurosci       Date:  2002-08       Impact factor: 13.837

4.  Plasminogen stimulates propagation of protease-resistant prion protein in vitro.

Authors:  Charles E Mays; Chongsuk Ryou
Journal:  FASEB J       Date:  2010-08-23       Impact factor: 5.191

Review 5.  Prion hypothesis: the end of the controversy?

Authors:  Claudio Soto
Journal:  Trends Biochem Sci       Date:  2010-12-03       Impact factor: 13.807

Review 6.  Iatrogenic Creutzfeldt-Jakob disease at the millennium.

Authors:  P Brown; M Preece; J P Brandel; T Sato; L McShane; I Zerr; A Fletcher; R G Will; M Pocchiari; N R Cashman; J H d'Aignaux; L Cervenáková; J Fradkin; L B Schonberger; S J Collins
Journal:  Neurology       Date:  2000-10-24       Impact factor: 9.910

7.  Estimating prion concentration in fluids and tissues by quantitative PMCA.

Authors:  Baian Chen; Rodrigo Morales; Marcelo A Barria; Claudio Soto
Journal:  Nat Methods       Date:  2010-05-30       Impact factor: 28.547

Review 8.  Prion diseases of humans and animals: their causes and molecular basis.

Authors:  J Collinge
Journal:  Annu Rev Neurosci       Date:  2001       Impact factor: 12.449

9.  Effect of transition metals (Mn, Cu, Fe) and deoxycholic acid (DA) on the conversion of PrPC to PrPres.

Authors:  Nam-Ho Kim; Jin-Kyu Choi; Byung-Hoon Jeong; Jae-Il Kim; Myung-Sang Kwon; Richard I Carp; Yong-Sun Kim
Journal:  FASEB J       Date:  2005-03-09       Impact factor: 5.191

10.  Sulfated dextrans enhance in vitro amplification of bovine spongiform encephalopathy PrP(Sc) and enable ultrasensitive detection of bovine PrP(Sc).

Authors:  Yuichi Murayama; Miyako Yoshioka; Kentaro Masujin; Hiroyuki Okada; Yoshifumi Iwamaru; Morikazu Imamura; Yuichi Matsuura; Shigeo Fukuda; Sadao Onoe; Takashi Yokoyama; Shirou Mohri
Journal:  PLoS One       Date:  2010-10-04       Impact factor: 3.240

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  14 in total

1.  Modified Protein Misfolding Cyclic Amplification Overcomes Real-Time Quaking-Induced Conversion Assay Inhibitors in Deer Saliva To Detect Chronic Wasting Disease Prions.

Authors:  Kristen A Davenport; Clare E Hoover; Nathaniel D Denkers; Candace K Mathiason; Edward A Hoover
Journal:  J Clin Microbiol       Date:  2018-08-27       Impact factor: 5.948

2.  Infrared microspectroscopy detects protein misfolding cyclic amplification (PMCA)-induced conformational alterations in hamster scrapie progeny seeds.

Authors:  Martin L Daus; Katja Wagenführ; Achim Thomzig; Susann Boerner; Peter Hermann; Antje Hermelink; Michael Beekes; Peter Lasch
Journal:  J Biol Chem       Date:  2013-10-25       Impact factor: 5.157

3.  Small molecule inhibits α-synuclein aggregation, disrupts amyloid fibrils, and prevents degeneration of dopaminergic neurons.

Authors:  Jordi Pujols; Samuel Peña-Díaz; Diana F Lázaro; Francesca Peccati; Francisca Pinheiro; Danilo González; Anita Carija; Susanna Navarro; María Conde-Giménez; Jesús García; Salvador Guardiola; Ernest Giralt; Xavier Salvatella; Javier Sancho; Mariona Sodupe; Tiago Fleming Outeiro; Esther Dalfó; Salvador Ventura
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-24       Impact factor: 11.205

4.  Foldamers reveal and validate therapeutic targets associated with toxic α-synuclein self-assembly.

Authors:  Jemil Ahmed; Tessa C Fitch; Courtney M Donnelly; Johnson A Joseph; Tyler D Ball; Mikaela M Bassil; Ahyun Son; Chen Zhang; Aurélie Ledreux; Scott Horowitz; Yan Qin; Daniel Paredes; Sunil Kumar
Journal:  Nat Commun       Date:  2022-04-27       Impact factor: 17.694

Review 5.  Proteopathic Seed Amplification Assays for Neurodegenerative Disorders.

Authors:  Natália do Carmo Ferreira; Byron Caughey
Journal:  Clin Lab Med       Date:  2020-06-16       Impact factor: 2.172

Review 6.  The standard scrapie cell assay: development, utility and prospects.

Authors:  Jacques van der Merwe; Judd Aiken; David Westaway; Debbie McKenzie
Journal:  Viruses       Date:  2015-01-16       Impact factor: 5.048

Review 7.  Pursuing Multiple Biomarkers for Early Idiopathic Parkinson's Disease Diagnosis.

Authors:  Yareth Gopar-Cuevas; Ana P Duarte-Jurado; Rosa N Diaz-Perez; Odila Saucedo-Cardenas; Maria J Loera-Arias; Roberto Montes-de-Oca-Luna; Humberto Rodriguez-Rocha; Aracely Garcia-Garcia
Journal:  Mol Neurobiol       Date:  2021-08-05       Impact factor: 5.590

8.  Prion seeding activities of mouse scrapie strains with divergent PrPSc protease sensitivities and amyloid plaque content using RT-QuIC and eQuIC.

Authors:  Sarah Vascellari; Christina D Orrù; Andrew G Hughson; Declan King; Rona Barron; Jason M Wilham; Gerald S Baron; Brent Race; Alessandra Pani; Byron Caughey
Journal:  PLoS One       Date:  2012-11-05       Impact factor: 3.240

9.  Molecular barriers to zoonotic transmission of prions.

Authors:  Marcelo A Barria; Aru Balachandran; Masanori Morita; Tetsuyuki Kitamoto; Rona Barron; Jean Manson; Richard Knight; James W Ironside; Mark W Head
Journal:  Emerg Infect Dis       Date:  2014-01       Impact factor: 6.883

10.  In vitro detection of prionemia in TSE-infected cervids and hamsters.

Authors:  Alan M Elder; Davin M Henderson; Amy V Nalls; Jason M Wilham; Byron W Caughey; Edward A Hoover; Anthony E Kincaid; Jason C Bartz; Candace K Mathiason
Journal:  PLoS One       Date:  2013-11-01       Impact factor: 3.240

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