Literature DB >> 22526602

Nomenclature report on the major histocompatibility complex genes and alleles of Great Ape, Old and New World monkey species.

Natasja G de Groot1, Nel Otting, James Robinson, Antoine Blancher, Bernard A P Lafont, Steven G E Marsh, David H O'Connor, Takashi Shiina, Lutz Walter, David I Watkins, Ronald E Bontrop.   

Abstract

The major histocompatibility complex (MHC) plays a central role in the adaptive immune response. The MHC region is characterised by a high gene density, and most of these genes display considerable polymorphism. Next to humans, non-human primates (NHP) are well studied for their MHC. The present nomenclature report provides the scientific community with the latest nomenclature guidelines/rules and current implemented nomenclature revisions for Great Ape, Old and New World monkey species. All the currently published MHC data for the different Great Ape, Old and New World monkey species are archived at the Immuno Polymorphism Database (IPD)-MHC NHP database. The curators of the IPD-MHC NHP database are, in addition, responsible for providing official designations for newly detected polymorphisms.

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Year:  2012        PMID: 22526602      PMCID: PMC3396756          DOI: 10.1007/s00251-012-0617-1

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  61 in total

1.  Novel cynomolgus macaque MHC-DPB1 polymorphisms in three South-East Asian populations.

Authors:  K Sano; T Shiina; S Kohara; K Yanagiya; K Hosomichi; S Shimizu; T Anzai; A Watanabe; K Ogasawara; R Torii; J K Kulski; H Inoko
Journal:  Tissue Antigens       Date:  2006-04

2.  Nomenclature for factors of the HLA system, 2004.

Authors:  S G E Marsh; E D Albert; W F Bodmer; R E Bontrop; B Dupont; H A Erlich; D E Geraghty; J A Hansen; C K Hurley; B Mach; W R Mayr; P Parham; E W Petersdorf; T Sasazuki; G M Th Schreuder; J L Strominger; A Svejgaard; P I Terasaki; J Trowsdale
Journal:  Tissue Antigens       Date:  2005-04

3.  Reshuffling of ancient peptide binding motifs between HLA-DRB multigene family members: old wine served in new skins.

Authors:  Gaby G M Doxiadis; Nanine de Groot; Natasja G de Groot; Ilias I N Doxiadis; Ronald E Bontrop
Journal:  Mol Immunol       Date:  2008-05       Impact factor: 4.407

4.  The MHC-E locus is the most well conserved of all known primate class I histocompatibility genes.

Authors:  L A Knapp; L F Cadavid; D I Watkins
Journal:  J Immunol       Date:  1998-01-01       Impact factor: 5.422

5.  Unparalleled complexity of the MHC class I region in rhesus macaques.

Authors:  Nel Otting; Corrine M C Heijmans; Riet C Noort; Natasja G de Groot; Gaby G M Doxiadis; Jon J van Rood; David I Watkins; Ronald E Bontrop
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-21       Impact factor: 11.205

6.  ISAG/IUIS-VIC Comparative MHC Nomenclature Committee report, 2005.

Authors:  Shirley A Ellis; Ronald E Bontrop; Doug F Antczak; Keith Ballingall; Christopher J Davies; Jim Kaufman; Lorna J Kennedy; James Robinson; Douglas M Smith; Michael J Stear; Rene J M Stet; Matthew J Waller; Lutz Walter; Steven G E Marsh
Journal:  Immunogenetics       Date:  2006-01-03       Impact factor: 2.846

Review 7.  Major histocompatibility complex class I genes in primates: co-evolution with pathogens.

Authors:  T U Vogel; D T Evans; J A Urvater; D H O'Connor; A L Hughes; D I Watkins
Journal:  Immunol Rev       Date:  1999-02       Impact factor: 12.988

8.  Characterization and distribution of Mhc-DPB1 alleles in chimpanzee and rhesus macaque populations.

Authors:  N Otting; G G Doxiadis; L Versluis; N G de Groot; J Anholts; W Verduin; E Rozemuller; F Claas; M G Tilanus; R E Bontrop
Journal:  Hum Immunol       Date:  1998-10       Impact factor: 2.850

9.  MHC class I genes in a New World primate, the cotton-top tamarin (Saguinus oedipus), have evolved by an active process of loci turnover.

Authors:  L F Cadavid; B E Mejía; D I Watkins
Journal:  Immunogenetics       Date:  1999-03       Impact factor: 2.846

10.  Extensive sharing of MHC class II alleles between rhesus and cynomolgus macaques.

Authors:  Gaby G M Doxiadis; Annemiek J M Rouweler; Natasja G de Groot; Annet Louwerse; Nel Otting; Ernst J Verschoor; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2006-02-10       Impact factor: 3.330

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  53 in total

1.  Unique peptide-binding motif for Mamu-B*037:01: an MHC class I allele common to Indian and Chinese rhesus macaques.

Authors:  Natasja G de Groot; Corrine M C Heijmans; Arnoud H de Ru; Chopie Hassan; Nel Otting; Gaby G M Doxiadis; Frits Koning; Peter A van Veelen; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2013-09-17       Impact factor: 2.846

Review 2.  Haplessly hoping: macaque major histocompatibility complex made easy.

Authors:  Roger W Wiseman; Julie A Karl; Patrick S Bohn; Francesca A Nimityongskul; Gabriel J Starrett; David H O'Connor
Journal:  ILAR J       Date:  2013

3.  Study of MHC class II region polymorphism in the Filipino cynomolgus macaque population.

Authors:  A Blancher; A Aarnink; Y Yamada; K Tanaka; H Yamanaka; T Shiina
Journal:  Immunogenetics       Date:  2014-02-26       Impact factor: 2.846

4.  Cell-surface MHC density profiling reveals instability of autoimmunity-associated HLA.

Authors:  Hiroko Miyadera; Jun Ohashi; Åke Lernmark; Toshio Kitamura; Katsushi Tokunaga
Journal:  J Clin Invest       Date:  2014-12-08       Impact factor: 14.808

5.  Comparative MHC nomenclature: report from the ISAG/IUIS-VIC committee 2018.

Authors:  Keith T Ballingall; Ronald E Bontrop; Shirley A Ellis; Unni Grimholt; John A Hammond; Chak-Sum Ho; Jim Kaufman; Lorna J Kennedy; Giuseppe Maccari; Donald Miller; James Robinson; Steven G E Marsh
Journal:  Immunogenetics       Date:  2018-07-24       Impact factor: 2.846

6.  Evolution of HLA-DRB genes.

Authors:  Gaby G M Doxiadis; Ilka Hoof; Nanine de Groot; Ronald E Bontrop
Journal:  Mol Biol Evol       Date:  2012-07-23       Impact factor: 16.240

7.  Major histocompatibility complex haplotyping and long-amplicon allele discovery in cynomolgus macaques from Chinese breeding facilities.

Authors:  Julie A Karl; Michael E Graham; Roger W Wiseman; Katelyn E Heimbruch; Samantha M Gieger; Gaby G M Doxiadis; Ronald E Bontrop; David H O'Connor
Journal:  Immunogenetics       Date:  2017-01-11       Impact factor: 2.846

8.  The repertoire of MHC class I genes in the common marmoset: evidence for functional plasticity.

Authors:  Marit K van der Wiel; Nel Otting; Natasja G de Groot; Gaby G M Doxiadis; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2013-09-10       Impact factor: 2.846

9.  Identification of MHC class I sequences in four species of Macaca of China.

Authors:  Xiang Yan; Aixue Li; Lin Zeng; Yuhua Cao; Jianbin He; Longbao Lv; Lihua Sui; Huahu Ye; Junwen Fan; Xiaoxia Cui; Zhaozeng Sun
Journal:  Immunogenetics       Date:  2013-09-18       Impact factor: 2.846

Review 10.  Immunogenetics of the NKG2D ligand gene family.

Authors:  Masanori Kasahara; Shigeru Yoshida
Journal:  Immunogenetics       Date:  2012-07-29       Impact factor: 2.846

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