| Literature DB >> 22523543 |
Niels Rutten1, José L Gonzales, Armin R W Elbers, Annet G J Velthuis.
Abstract
BACKGROUND: As low pathogenic avian influenza viruses can mutate into high pathogenic viruses the Dutch poultry sector implemented a surveillance system for low pathogenic avian influenza (LPAI) based on blood samples. It has been suggested that egg yolk samples could be sampled instead of blood samples to survey egg layer farms. To support future decision making about AI surveillance economic criteria are important. Therefore a cost analysis is performed on systems that use either blood or eggs as sampled material. METHODOLOGY/PRINCIPALEntities:
Mesh:
Year: 2012 PMID: 22523543 PMCID: PMC3327686 DOI: 10.1371/journal.pone.0033930
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Overview of the evaluated Low Pathogenic Avian Influenza surveillance systems.
| Surveillance | Sampling | Sample preparation | |||||||||||||||||
| system | Material | Location | Frequency/yr | Number | Location | Method | |||||||||||||
| Blood | Eggs | Layer | Packing | Indoor | Outdoor | Indoor | Outdoor | Central | Packing | Robot | Hand | ||||||||
| farm | station | farms | farms | farms | farms | lab | station | ||||||||||||
| B/F/L |
| X | X | 1 | 4 | 30 | 30 | X | X | ||||||||||
| E/F/L |
| X | X | 1 | 4 | 35 | 35 | X | X | ||||||||||
| E/P/L |
| X | X | 1 | 4 | 35 | 35 | X | X | ||||||||||
| E/P/P |
| X | X | 1 | 4 | 35 | 35 | X | X | ||||||||||
| E/P/LP |
| X | X | 1 | 4 | 35 | 35 | X |
| X |
| X | |||||||
| E/FP/LP |
| X | X |
| X |
| 1 | 4 | 35 | 35 | X |
| X |
| X | ||||
| BE/FP1/L |
| X |
| X |
| X | X | 1 | 4 | 30 | 35 | X | X | ||||||
| BE/FP2/LP |
| X |
| X |
| X |
| X |
| 1 | 4 | 30 | 35 | X |
| X |
| X | |
Current system, implemented in practice.
Hypothetical alternative.
Small packing stations send in eggs.
Large packing station have a robot.
Farms that deliver to small packing stations send in eggs.
Large packing stations have a robot.
Blood samples for conventional farms.
Egg samples for outdoor ranging farms.
Surveillance system acronyms: The first part is the sampled material either blood (B), eggs (E) or a combination of blood and eggs (BE). The second part is the sampling location either farm (F), packing station (P), a combination of farm and packing station (FP), blood sampled at the farm and eggs sampled at the packing station (FP1) or blood sampled at the farm and eggs sampled and prepared at the packing station (FP2). The third part is the location of sample preparation either laboratory (L), packing station (P) or a combination of laboratory and packing station (LP).
Figure 1Flow chart of the process of sampling for blood and eggs in the various surveillance systems.
Figure 2Total net costs of various surveillance systems and differentiation to various activities.
Surveillance system acronyms: The first part is the sampled material either blood (B), eggs (E) or a combination of blood and eggs (BE). The second part is the sampling location either farm (F), packing station (P), a combination of farm and packing station (FP), blood sampled at the farm and eggs sampled at the packing station (FP1) or blood sampled at the farm and eggs sampled and prepared at the packing station (FP2). The third part is the location of sample preparation either laboratory (L), packing station (P) or a combination of laboratory and packing station (LP).
Total costs of LPAI surveillance systems.
|
| ||||||||
| Activity within surveillance system | B/F/L | E/F/L | E/P/L | E/P/P | E/P/LP | E/FP/LP | BE/FP1/L | BE/FP2/L |
| Sampling | 157,609 | 13,628 | 8,116 | 8,116 | 8,116 | 10,286 | 61,118 | 61,118 |
| Sample preparation | 22,524 | 40,358 | 40,358 | 2,111,808 | 137,838 | 137,838 | 49,766 | 147,246 |
| Transport to central lab | 13,053 | 13,053 | 3,263 | 13,053 | 2,945 | 6,800 | 7,506 | 8,467 |
| ELISA test | 172,398 | 201,131 | 201,131 | 201,131 | 201,131 | 201,131 | 188,679 | 188,679 |
| Waste processing | - | 5,415 | 5,415 | 5,415 | 5,415 | 5,415 | 3,068 | 3,068 |
| Communicating test results | 967 | 967 | 967 | 967 | 967 | 967 | 967 | 967 |
| Confirmation false positive results | 12,124 | 14,144 | 14,144 | 14,144 | 14,144 | 14,144 | 13,269 | 13,269 |
|
| 378,674 | 288,695 | 273,393 | 2,354,632 | 370,554 | 376,580 | 324,372 | 422,813 |
The total costs are the sum of the costs for surveillance on indoor and outdoor farms.
Surveillance system acronyms: The first part is the sampled material either blood (B), eggs (E) or a combination of blood and eggs (BE). The second part is the sampling location either farm (F), packing station (P), a combination of farm and packing station (FP), blood sampled at the farm and eggs sampled at the packing station (FP1) or blood sampled at the farm and eggs sampled and prepared at the packing station (FP2). The third part is the location of sample preparation either laboratory (L), packing station (P) or a combination of laboratory and packing station (LP).
Costs per firm (i.e. farm, packing station or laboratory) per year.
| Sampling | Sample preparation | ||||
| Blood | Egg | Blood | Eggs | Blood+Eggs | |
| Farm (€/farm/year) | |||||
| Indoor | 67.45 | 7.05 | nr | nr | nr |
| Outdoor | 374.41 | 28.60 | nr | nr | nr |
| Packing station (€/packing station/year) | |||||
| Sampling | nr | 94.37 | nr | nr | nr |
| Sampling+sample preparation | nr | 94.37 | nr | 24,556 | nr |
| Small | nr | 38.97 | nr | nr | nr |
| Large | nr | 1,230 | nr | 26,793 | nr |
| Laboratory (€/laboratory/year) | |||||
| Laboratory | nr | nr | 22,524 | 40,358 | 49,766 |
Figure 3Sensitivity analysis for the most influential inputs (below the bars).
For each surveillance system only inputs are shown that cause at least a 5% increase and decrease of total costs. Surveillance system acronyms: The first part is the sampled material either blood (B), eggs (E) or a combination of blood and eggs (BE). The second part is the sampling location either farm (F), packing station (P), a combination of farm and packing station (FP), blood sampled at the farm and eggs sampled at the packing station (FP1) or blood sampled at the farm and eggs sampled and prepared at the packing station (FP2). The third part is the location of sample preparation either laboratory (L), packing station (P) or a combination of laboratory and packing station (LP).Other abbreviations: SF out: Sampling Frequency outdoor farms, NF out: Number of outdoor farms, NSF: Number of Samples per Farm, PT: Price of one Test, NRE: Number of Robot for Eggs, TLT: Technical lifetime of a robot and PPR eggs: Purchase Price Robot for eggs.