Literature DB >> 22522897

Complete DNA sequence analysis of enterohemorrhagic Escherichia coli plasmid pO157_2 in β-glucuronidase-positive E. coli O157:H7 reveals a novel evolutionary path.

L V Rump1, J Meng, E A Strain, G Cao, M W Allard, N Gonzalez-Escalona.   

Abstract

Strains of enterohemorragic Escherichia coli (EHEC) O157:H7 that are non-sorbitol fermenting (NSF) and β-glucuronidase negative (GUD(-)) carry a large virulence plasmid, pO157 (>90,000 bp), whereas closely related sorbitol-fermenting (SF) E. coli O157:H(-) strains carry plasmid pSFO157 (>120,000 bp). GUD(+) NSF O157:H7 strains are presumed to be precursors of GUD(-) NSF O157:H7 strains that also carry pO157. In this study, we report the complete sequence of a novel virulence plasmid, pO157-2 (89,762 bp), isolated from GUD(+) NSF O157:H7 strain G5101. PCR analysis confirmed the presence of pO157-2 in six other strains of GUD(+) NSF O157:H7. pO157-2 carries genes associated with virulence (e.g., hemolysin genes) and conjugation (tra and trb genes) but lacks katP and espP present in pO157. Comparative analysis of the three EHEC plasmids shows that pO157-2 is highly related to pO157 and pSFO157 but not ancestral to pO157. These results indicated that GUD(+) NSF O157:H7 strains might not be direct precursors to GUD(-) NSF O157:H7 as previously proposed but rather have evolved independently from a common ancestor.

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Year:  2012        PMID: 22522897      PMCID: PMC3434749          DOI: 10.1128/JB.00197-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  29 in total

1.  Analysis of the EHEC hly operon and its location in the physical map of the large plasmid of enterohaemorrhagic Escherichia coli O157:h7.

Authors:  Herbert Schmidt; Christian Kernbach; Helge Karch
Journal:  Microbiology (Reading)       Date:  1996-04       Impact factor: 2.777

2.  Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes.

Authors:  Tadasuke Ooka; Yoshitoshi Ogura; Md Asadulghani; Makoto Ohnishi; Keisuke Nakayama; Jun Terajima; Haruo Watanabe; Tetsuya Hayashi
Journal:  Genome Res       Date:  2009-06-29       Impact factor: 9.043

3.  Insertion sequence-excision enhancer removes transposable elements from bacterial genomes and induces various genomic deletions.

Authors:  Masahiro Kusumoto; Tadasuke Ooka; Yoshiaki Nishiya; Yoshitoshi Ogura; Takashi Saito; Yasuhiko Sekine; Taketoshi Iwata; Masato Akiba; Tetsuya Hayashi
Journal:  Nat Commun       Date:  2011-01-11       Impact factor: 14.919

4.  Genotypic and phenotypic changes in the emergence of Escherichia coli O157:H7.

Authors:  P Feng; K A Lampel; H Karch; T S Whittam
Journal:  J Infect Dis       Date:  1998-06       Impact factor: 5.226

5.  EspP, a novel extracellular serine protease of enterohaemorrhagic Escherichia coli O157:H7 cleaves human coagulation factor V.

Authors:  W Brunder; H Schmidt; H Karch
Journal:  Mol Microbiol       Date:  1997-05       Impact factor: 3.501

6.  Nucleotide sequence and characterization of the traABCD region of IncI1 plasmid R64.

Authors:  S R Kim; N Funayama; T Komano
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

7.  The large plasmids of Shiga-toxin-producing Escherichia coli (STEC) are highly variable genetic elements.

Authors:  Werner Brunder; Herbert Schmidt; Matthias Frosch; Helge Karch
Journal:  Microbiology       Date:  1999-05       Impact factor: 2.777

8.  The large-sized plasmids of enterohemorrhagic Escherichia coli O157 strains encode hemolysins which are presumably members of the E. coli alpha-hemolysin family.

Authors:  H Schmidt; H Karch; L Beutin
Journal:  FEMS Microbiol Lett       Date:  1994-04-01       Impact factor: 2.742

9.  Derivation of Escherichia coli O157:H7 from its O55:H7 precursor.

Authors:  Zhemin Zhou; Xiaomin Li; Bin Liu; Lothar Beutin; Jianguo Xu; Yan Ren; Lu Feng; Ruiting Lan; Peter R Reeves; Lei Wang
Journal:  PLoS One       Date:  2010-01-14       Impact factor: 3.240

10.  Genetic diversity among clonal lineages within Escherichia coli O157:H7 stepwise evolutionary model.

Authors:  Peter C H Feng; Steven R Monday; David W Lacher; Lesley Allison; Anja Siitonen; Christine Keys; Marjut Eklund; Hideki Nagano; Helge Karch; James Keen; Thomas S Whittam
Journal:  Emerg Infect Dis       Date:  2007-11       Impact factor: 6.883

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  8 in total

1.  Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing.

Authors:  Wenting Ju; Guojie Cao; Lydia Rump; Errol Strain; Yan Luo; Ruth Timme; Marc Allard; Shaohua Zhao; Eric Brown; Jianghong Meng
Journal:  J Clin Microbiol       Date:  2012-10-10       Impact factor: 5.948

2.  Genomic diversity and virulence profiles of historical Escherichia coli O157 strains isolated from clinical and environmental sources.

Authors:  Lydia V Rump; Narjol Gonzalez-Escalona; Wenting Ju; Fei Wang; Guojie Cao; Sean Meng; Jianghong Meng
Journal:  Appl Environ Microbiol       Date:  2014-11-07       Impact factor: 4.792

3.  Sorbitol-Fermenting Enterohemorrhagic Escherichia coli O157:H- Isolates from Czech Patients with Novel Plasmid Composition Not Previously Seen in German Isolates.

Authors:  Andreas Bauwens; Monika Marejková; Barbara Middendorf-Bauchart; Rita Prager; Annelene Kossow; Wenlan Zhang; Helge Karch; Alexander Mellmann; Martina Bielaszewska
Journal:  Appl Environ Microbiol       Date:  2017-11-16       Impact factor: 4.792

Review 4.  Prevalence, biogenesis, and functionality of the serine protease autotransporter EspP.

Authors:  André Weiss; Jens Brockmeyer
Journal:  Toxins (Basel)       Date:  2012-12-28       Impact factor: 4.546

5.  Utility of Whole-Genome Sequencing of Escherichia coli O157 for Outbreak Detection and Epidemiological Surveillance.

Authors:  Anne Holmes; Lesley Allison; Melissa Ward; Timothy J Dallman; Richard Clark; Angie Fawkes; Lee Murphy; Mary Hanson
Journal:  J Clin Microbiol       Date:  2015-09-09       Impact factor: 5.948

6.  Whole-Genome Sequences of 12 Clinical Strains of Listeria monocytogenes.

Authors:  Guojie Cao; Jianmin Zhang; Xuebin Xu; Huiming Jin; Xiaowei Yang; Haijian Pan; Marc Allard; Eric Brown; Jianghong Meng
Journal:  Genome Announc       Date:  2015-02-26

7.  Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes.

Authors:  Emmanuel C Nyong; Sam R Zaia; Anna Allué-Guardia; Armando L Rodriguez; Zaina Irion-Byrd; Sara S K Koenig; Peter Feng; James L Bono; Mark Eppinger
Journal:  Front Microbiol       Date:  2020-04-15       Impact factor: 5.640

8.  Genomic Characterization of β-Glucuronidase-Positive Escherichia coli O157:H7 Producing Stx2a.

Authors:  Yoshitoshi Ogura; Kazuko Seto; Yo Morimoto; Keiji Nakamura; Mitsuhiko P Sato; Yasuhiro Gotoh; Takehiko Itoh; Atsushi Toyoda; Makoto Ohnishi; Tetsuya Hayashi
Journal:  Emerg Infect Dis       Date:  2018-12       Impact factor: 6.883

  8 in total

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