Literature DB >> 22500799

Negative feedback enhances robustness in the yeast polarity establishment circuit.

Audrey S Howell1, Meng Jin, Chi-Fang Wu, Trevin R Zyla, Timothy C Elston, Daniel J Lew.   

Abstract

Many cells undergo symmetry-breaking polarization toward a randomly oriented "front" in the absence of spatial cues. In budding yeast, such polarization involves a positive feedback loop that enables amplification of stochastically arising clusters of polarity factors. Previous mathematical modeling suggested that, if more than one cluster were amplified, the clusters would compete for limiting resources and the largest would "win," explaining why yeast cells always make one and only one bud. Here, using imaging with improved spatiotemporal resolution, we show the transient coexistence of multiple clusters during polarity establishment, as predicted by the model. Unexpectedly, we also find that initial polarity factor clustering is oscillatory, revealing the presence of a negative feedback loop that disperses the factors. Mathematical modeling predicts that negative feedback would confer robustness to the polarity circuit and make the kinetics of competition between polarity factor clusters relatively insensitive to polarity factor concentration. These predictions are confirmed experimentally.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22500799      PMCID: PMC3680131          DOI: 10.1016/j.cell.2012.03.012

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  40 in total

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Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

2.  From function to shape: a novel role of a formin in morphogenesis of the fungus Ashbya gossypii.

Authors:  Hans-Peter Schmitz; Andreas Kaufmann; Michael Köhli; Pierre Philippe Laissue; Peter Philippsen
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3.  The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.

Authors:  Fred S Dietrich; Sylvia Voegeli; Sophie Brachat; Anita Lerch; Krista Gates; Sabine Steiner; Christine Mohr; Rainer Pöhlmann; Philippe Luedi; Sangdun Choi; Rod A Wing; Albert Flavier; Thomas D Gaffney; Peter Philippsen
Journal:  Science       Date:  2004-03-04       Impact factor: 47.728

4.  Septin ring assembly requires concerted action of polarisome components, a PAK kinase Cla4p, and the actin cytoskeleton in Saccharomyces cerevisiae.

Authors:  Jun Kadota; Takaharu Yamamoto; Shiro Yoshiuchi; Erfei Bi; Kazuma Tanaka
Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

Review 5.  Design principles of biochemical oscillators.

Authors:  Béla Novák; John J Tyson
Journal:  Nat Rev Mol Cell Biol       Date:  2008-10-30       Impact factor: 94.444

6.  Singularity in polarization: rewiring yeast cells to make two buds.

Authors:  Audrey S Howell; Natasha S Savage; Sam A Johnson; Indrani Bose; Allison W Wagner; Trevin R Zyla; H Frederik Nijhout; Michael C Reed; Andrew B Goryachev; Daniel J Lew
Journal:  Cell       Date:  2009-11-13       Impact factor: 41.582

7.  Scaffold-mediated symmetry breaking by Cdc42p.

Authors:  Javier E Irazoqui; Amy S Gladfelter; Daniel J Lew
Journal:  Nat Cell Biol       Date:  2003-11-16       Impact factor: 28.824

Review 8.  A comparison of mathematical models for polarization of single eukaryotic cells in response to guided cues.

Authors:  Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  PLoS Comput Biol       Date:  2011-04-28       Impact factor: 4.475

9.  Septins: molecular partitioning and the generation of cellular asymmetry.

Authors:  Michael A McMurray; Jeremy Thorner
Journal:  Cell Div       Date:  2009-08-26       Impact factor: 5.130

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  99 in total

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Journal:  Traffic       Date:  2014-10-08       Impact factor: 6.215

2.  Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal.

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Journal:  Elife       Date:  2017-02-01       Impact factor: 8.140

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Authors:  Steven B Haase; Curt Wittenberg
Journal:  Genetics       Date:  2014-01       Impact factor: 4.562

4.  Competing molecular interactions of aPKC isoforms regulate neuronal polarity.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-12       Impact factor: 11.205

5.  Imaging Polarization in Budding Yeast.

Authors:  Allison W McClure; Chi-Fang Wu; Sam A Johnson; Daniel J Lew
Journal:  Methods Mol Biol       Date:  2016

6.  The NDR Kinase Cbk1 Downregulates the Transcriptional Repressor Nrg1 through the mRNA-Binding Protein Ssd1 in Candida albicans.

Authors:  Hye-Jeong Lee; Jong-Myeong Kim; Woo Kyu Kang; Heebum Yang; Jeong-Yoon Kim
Journal:  Eukaryot Cell       Date:  2015-05-22

7.  Regulation of Cdc42 polarization by the Rsr1 GTPase and Rga1, a Cdc42 GTPase-activating protein, in budding yeast.

Authors:  Mid Eum Lee; Wing-Cheong Lo; Kristi E Miller; Ching-Shan Chou; Hay-Oak Park
Journal:  J Cell Sci       Date:  2015-04-23       Impact factor: 5.285

Review 8.  Single cell pattern formation and transient cytoskeletal arrays.

Authors:  William M Bement; George von Dassow
Journal:  Curr Opin Cell Biol       Date:  2013-10-23       Impact factor: 8.382

9.  Compartmentalization of a bistable switch enables memory to cross a feedback-driven transition.

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Journal:  Cell       Date:  2015-03-12       Impact factor: 41.582

10.  Rsr1 focuses Cdc42 activity at hyphal tips and promotes maintenance of hyphal development in Candida albicans.

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