Literature DB >> 22499027

Combined prospective and retrospective correction to reduce motion-induced image misalignment and geometric distortions in EPI.

Melvyn B Ooi1, Jordan Muraskin, Xiaowei Zou, William J Thomas, Sascha Krueger, Murat Aksoy, Roland Bammer, Truman R Brown.   

Abstract

Despite rigid-body realignment to compensate for head motion during an echo-planar imaging time-series scan, nonrigid image deformations remain due to changes in the effective shim within the brain as the head moves through the B(0) field. The current work presents a combined prospective/retrospective solution to reduce both rigid and nonrigid components of this motion-related image misalignment. Prospective rigid-body correction, where the scan-plane orientation is dynamically updated to track with the subject's head, is performed using an active marker setup. Retrospective distortion correction is then applied to unwarp the remaining nonrigid image deformations caused by motion-induced field changes. Distortion correction relative to a reference time-frame does not require any additional field mapping scans or models, but rather uses the phase information from the echo-planar imaging time-series itself. This combined method is applied to compensate echo-planar imaging scans of volunteers performing in-plane and through-plane head motions, resulting in increased image stability beyond what either prospective or retrospective rigid-body correction alone can achieve. The combined method is also assessed in a blood oxygen level dependent functional MRI task, resulting in improved Z-score statistics.
Copyright © 2012 Wiley Periodicals, Inc.

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Year:  2012        PMID: 22499027      PMCID: PMC3402592          DOI: 10.1002/mrm.24285

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  31 in total

1.  Modeling geometric deformations in EPI time series.

Authors:  J L Andersson; C Hutton; J Ashburner; R Turner; K Friston
Journal:  Neuroimage       Date:  2001-05       Impact factor: 6.556

2.  Prospective multiaxial motion correction for fMRI.

Authors:  H A Ward; S J Riederer; R C Grimm; R L Ehman; J P Felmlee; C R Jack
Journal:  Magn Reson Med       Date:  2000-03       Impact factor: 4.668

3.  Optimized distortion correction technique for echo planar imaging.

Authors:  N K Chen ; A M Wyrwicz
Journal:  Magn Reson Med       Date:  2001-03       Impact factor: 4.668

4.  Image distortion correction in fMRI: A quantitative evaluation.

Authors:  Chloe Hutton; Andreas Bork; Oliver Josephs; Ralf Deichmann; John Ashburner; Robert Turner
Journal:  Neuroimage       Date:  2002-05       Impact factor: 6.556

5.  Real-time autoshimming for echo planar timecourse imaging.

Authors:  Heidi A Ward; Stephen J Riederer; Clifford R Jack
Journal:  Magn Reson Med       Date:  2002-11       Impact factor: 4.668

6.  How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging.

Authors:  Jesper L R Andersson; Stefan Skare; John Ashburner
Journal:  Neuroimage       Date:  2003-10       Impact factor: 6.556

7.  Image distortion correction in EPI: comparison of field mapping with point spread function mapping.

Authors:  Huairen Zeng; R Todd Constable
Journal:  Magn Reson Med       Date:  2002-07       Impact factor: 4.668

8.  Fast, automated, N-dimensional phase-unwrapping algorithm.

Authors:  Mark Jenkinson
Journal:  Magn Reson Med       Date:  2003-01       Impact factor: 4.668

9.  Artifacts due to stimulus correlated motion in functional imaging of the brain.

Authors:  J V Hajnal; R Myers; A Oatridge; J E Schwieso; I R Young; G M Bydder
Journal:  Magn Reson Med       Date:  1994-03       Impact factor: 4.668

10.  Real-time optical motion correction for diffusion tensor imaging.

Authors:  Murat Aksoy; Christoph Forman; Matus Straka; Stefan Skare; Samantha Holdsworth; Joachim Hornegger; Roland Bammer
Journal:  Magn Reson Med       Date:  2011-03-22       Impact factor: 4.668

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  19 in total

1.  Correction of B 0-induced geometric distortion variations in prospective motion correction for 7T MRI.

Authors:  Uten Yarach; Chaiya Luengviriya; Daniel Stucht; Frank Godenschweger; Peter Schulze; Oliver Speck
Journal:  MAGMA       Date:  2016-02-09       Impact factor: 2.310

Review 2.  Studying neuroanatomy using MRI.

Authors:  Jason P Lerch; André J W van der Kouwe; Armin Raznahan; Tomáš Paus; Heidi Johansen-Berg; Karla L Miller; Stephen M Smith; Bruce Fischl; Stamatios N Sotiropoulos
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

3.  Mechanochemical actuators of embryonic epithelial contractility.

Authors:  YongTae Kim; Melis Hazar; Deepthi S Vijayraghavan; Jiho Song; Timothy R Jackson; Sagar D Joshi; William C Messner; Lance A Davidson; Philip R LeDuc
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-22       Impact factor: 11.205

Review 4.  Prospective motion correction in functional MRI.

Authors:  Maxim Zaitsev; Burak Akin; Pierre LeVan; Benjamin R Knowles
Journal:  Neuroimage       Date:  2016-11-11       Impact factor: 6.556

5.  Correction of gradient nonlinearity artifacts in prospective motion correction for 7T MRI.

Authors:  Uten Yarach; Chaiya Luengviriya; Appu Danishad; Daniel Stucht; Frank Godenschweger; Peter Schulze; Oliver Speck
Journal:  Magn Reson Med       Date:  2014-05-05       Impact factor: 4.668

Review 6.  Motion correction in MRI of the brain.

Authors:  F Godenschweger; U Kägebein; D Stucht; U Yarach; A Sciarra; R Yakupov; F Lüsebrink; P Schulze; O Speck
Journal:  Phys Med Biol       Date:  2016-02-11       Impact factor: 3.609

7.  Prospective active marker motion correction improves statistical power in BOLD fMRI.

Authors:  Jordan Muraskin; Melvyn B Ooi; Robin I Goldman; Sascha Krueger; William J Thomas; Paul Sajda; Truman R Brown
Journal:  Neuroimage       Date:  2012-12-05       Impact factor: 6.556

8.  Model-based iterative reconstruction for single-shot EPI at 7T.

Authors:  Uten Yarach; Myung-Ho In; Itthi Chatnuntawech; Berkin Bilgic; Frank Godenschweger; Hendrik Mattern; Alessandro Sciarra; Oliver Speck
Journal:  Magn Reson Med       Date:  2017-02-10       Impact factor: 4.668

9.  SimPACE: generating simulated motion corrupted BOLD data with synthetic-navigated acquisition for the development and evaluation of SLOMOCO: a new, highly effective slicewise motion correction.

Authors:  Erik B Beall; Mark J Lowe
Journal:  Neuroimage       Date:  2014-06-24       Impact factor: 6.556

10.  Prospective motion correction using inductively coupled wireless RF coils.

Authors:  Melvyn B Ooi; Murat Aksoy; Julian Maclaren; Ronald D Watkins; Roland Bammer
Journal:  Magn Reson Med       Date:  2013-06-27       Impact factor: 4.668

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