Literature DB >> 22482008

Active actin gels.

Shahid M Khan, Rehan Ali, Nimra Asi, Justin E Molloy.   

Abstract

The self-organization of actin filaments is a topic that links cell biology with condensed matter physics. In vitro assays allow precise manipulation of component mechanical and chemical properties, needed for rigorous tests of theoretical models. We review recent work on in vitro motility assays that documented emergence of ordered actin filament microdomains powered by myosin motor proteins at high filament densities. Motor and filament surface density and mechanochemical cycle kinetics are additional parameters under current investigation. Individual filament collisions have been studied in order to elucidate the emergent population behavior. Apolar, weak  interactions evidenced by local filament deformations during crossover events are attenuated at high motor densities. Theoretical analysis requires refinement of rigid rod filament models. In intact cells, accessory proteins modulate actin filament length, bundling or sliding and this gives rise to complex emergent structures and behaviors such as cell motility and chemotaxis. The development of generic, mechanical and biochemical frameworks with predictive power that link molecular properties with micro- and macroscopic phenomena seen in living cells requires dialogue between theoreticians and experimentalists.

Entities:  

Keywords:  biopolymers; computer tracking; cytoskeleton; in vitro motility; molecular motors

Year:  2012        PMID: 22482008      PMCID: PMC3291312          DOI: 10.4161/cib.18286

Source DB:  PubMed          Journal:  Commun Integr Biol        ISSN: 1942-0889


  25 in total

1.  Novel type of phase transition in a system of self-driven particles.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-08-07       Impact factor: 9.161

Review 2.  Cellular motility driven by assembly and disassembly of actin filaments.

Authors:  Thomas D Pollard; Gary G Borisy
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

3.  Muscle structure and theories of contraction.

Authors:  A F HUXLEY
Journal:  Prog Biophys Biophys Chem       Date:  1957

4.  Polar patterns of driven filaments.

Authors:  Volker Schaller; Christoph Weber; Christine Semmrich; Erwin Frey; Andreas R Bausch
Journal:  Nature       Date:  2010-09-02       Impact factor: 49.962

5.  Collective motion of vibrated polar disks.

Authors:  Julien Deseigne; Olivier Dauchot; Hugues Chaté
Journal:  Phys Rev Lett       Date:  2010-08-23       Impact factor: 9.161

6.  Quantized velocities at low myosin densities in an in vitro motility assay.

Authors:  T Q Uyeda; H M Warrick; S J Kron; J A Spudich
Journal:  Nature       Date:  1991-07-25       Impact factor: 49.962

7.  Buckling, stiffening, and negative dissipation in the dynamics of a biopolymer in an active medium.

Authors:  Norio Kikuchi; Allen Ehrlicher; Daniel Koch; Josef A Käs; Sriram Ramaswamy; Madan Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-09       Impact factor: 11.205

8.  Fluorescent actin filaments move on myosin fixed to a glass surface.

Authors:  S J Kron; J A Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

9.  Direct measurement of stiffness of single actin filaments with and without tropomyosin by in vitro nanomanipulation.

Authors:  H Kojima; A Ishijima; T Yanagida
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

10.  Myosin motors drive long range alignment of actin filaments.

Authors:  Tariq Butt; Tabish Mufti; Ahmad Humayun; Peter B Rosenthal; Sohaib Khan; Shahid Khan; Justin E Molloy
Journal:  J Biol Chem       Date:  2009-11-24       Impact factor: 5.157

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  5 in total

1.  Shape control and compartmentalization in active colloidal cells.

Authors:  Matthew Spellings; Michael Engel; Daphne Klotsa; Syeda Sabrina; Aaron M Drews; Nguyen H P Nguyen; Kyle J M Bishop; Sharon C Glotzer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-07       Impact factor: 11.205

Review 2.  Mechanical Properties of the Cytoskeleton and Cells.

Authors:  Adrian F Pegoraro; Paul Janmey; David A Weitz
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-11-01       Impact factor: 10.005

3.  Spatiotemporal dynamics of actomyosin networks.

Authors:  Saman Hussain; Justin E Molloy; Shahid M Khan
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

4.  Architectural Dynamics of CaMKII-Actin Networks.

Authors:  Shahid Khan; Kenneth H Downing; Justin E Molloy
Journal:  Biophys J       Date:  2018-11-10       Impact factor: 4.033

Review 5.  On Having No Head: Cognition throughout Biological Systems.

Authors:  František Baluška; Michael Levin
Journal:  Front Psychol       Date:  2016-06-21
  5 in total

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