Literature DB >> 19901332

Buckling, stiffening, and negative dissipation in the dynamics of a biopolymer in an active medium.

Norio Kikuchi1, Allen Ehrlicher, Daniel Koch, Josef A Käs, Sriram Ramaswamy, Madan Rao.   

Abstract

We present a generic theory for the dynamics of a stiff filament under tension, in an active medium with orientational correlations, such as a microtubule in contractile actin. In sharp contrast to the case of a passive medium, we find the filament can stiffen, and possibly oscillate or buckle, depending on both the contractile or tensile nature of the activity and the filament-medium anchoring interaction. We also demonstrate a strong violation of the fluctuation-dissipation (FD) relation in the effective dynamics of the filament, including a negative FD ratio. Our approach is also of relevance to the dynamics of axons, and our model equations bear a remarkable formal similarity to those in recent work [Martin P, Hudspeth AJ, Juelicher F (2001) Proc Natl Acad Sci USA 98:14380-14385] on auditory hair cells. Detailed tests of our predictions can be made by using a single filament in actomyosin extracts or bacterial suspensions.

Mesh:

Substances:

Year:  2009        PMID: 19901332      PMCID: PMC2785242          DOI: 10.1073/pnas.0900451106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Comparison of a hair bundle's spontaneous oscillations with its response to mechanical stimulation reveals the underlying active process.

Authors:  P Martin; A J Hudspeth; F Jülicher
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

2.  Continuous isotropic-nematic liquid crystalline transition of F-actin solutions.

Authors:  Jorge Viamontes; Jay X Tang
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-04-08

3.  Rheology of active-particle suspensions.

Authors:  Yashodhan Hatwalne; Sriram Ramaswamy; Madan Rao; R Aditi Simha
Journal:  Phys Rev Lett       Date:  2004-03-19       Impact factor: 9.161

4.  Asters, vortices, and rotating spirals in active gels of polar filaments.

Authors:  K Kruse; J F Joanny; F Jülicher; J Prost; K Sekimoto
Journal:  Phys Rev Lett       Date:  2004-02-20       Impact factor: 9.161

5.  Generic theory of active polar gels: a paradigm for cytoskeletal dynamics.

Authors:  K Kruse; J F Joanny; F Jülicher; J Prost; K Sekimoto
Journal:  Eur Phys J E Soft Matter       Date:  2005-01-31       Impact factor: 1.890

Review 6.  The cell as a material.

Authors:  Karen E Kasza; Amy C Rowat; Jiayu Liu; Thomas E Angelini; Clifford P Brangwynne; Gijsje H Koenderink; David A Weitz
Journal:  Curr Opin Cell Biol       Date:  2006-12-15       Impact factor: 8.382

7.  Fluctuations and rheology in active bacterial suspensions.

Authors:  D T N Chen; A W C Lau; L A Hough; M F Islam; M Goulian; T C Lubensky; A G Yodh
Journal:  Phys Rev Lett       Date:  2007-10-03       Impact factor: 9.161

8.  Nonequilibrium microtubule fluctuations in a model cytoskeleton.

Authors:  Clifford P Brangwynne; Gijsje H Koenderink; Frederick C Mackintosh; David A Weitz
Journal:  Phys Rev Lett       Date:  2008-03-21       Impact factor: 9.161

9.  Elongation and fluctuations of semiflexible polymers in a nematic solvent.

Authors:  Z Dogic; J Zhang; A W C Lau; H Aranda-Espinoza; P Dalhaimer; D E Discher; P A Janmey; Randall D Kamien; T C Lubensky; A G Yodh
Journal:  Phys Rev Lett       Date:  2004-03-24       Impact factor: 9.161

10.  WHAMM is an Arp2/3 complex activator that binds microtubules and functions in ER to Golgi transport.

Authors:  Kenneth G Campellone; Neil J Webb; Elizabeth A Znameroski; Matthew D Welch
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

View more
  6 in total

1.  Dynamics of active semiflexible polymers.

Authors:  A Ghosh; N S Gov
Journal:  Biophys J       Date:  2014-09-02       Impact factor: 4.033

Review 2.  Emergent complexity of the cytoskeleton: from single filaments to tissue.

Authors:  F Huber; J Schnauß; S Rönicke; P Rauch; K Müller; C Fütterer; J Käs
Journal:  Adv Phys       Date:  2013-03-06       Impact factor: 25.375

Review 3.  Mechanical systems biology of C. elegans touch sensation.

Authors:  Michael Krieg; Alexander R Dunn; Miriam B Goodman
Journal:  Bioessays       Date:  2015-01-19       Impact factor: 4.345

4.  Active actin gels.

Authors:  Shahid M Khan; Rehan Ali; Nimra Asi; Justin E Molloy
Journal:  Commun Integr Biol       Date:  2012-01-01

Review 5.  An Integrated Cytoskeletal Model of Neurite Outgrowth.

Authors:  Kyle E Miller; Daniel M Suter
Journal:  Front Cell Neurosci       Date:  2018-11-26       Impact factor: 5.505

6.  Hydrodynamic instabilities provide a generic route to spontaneous biomimetic oscillations in chemomechanically active filaments.

Authors:  Abhrajit Laskar; Rajeev Singh; Somdeb Ghose; Gayathri Jayaraman; P B Sunil Kumar; R Adhikari
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.