Literature DB >> 2247461

A spliced leader is present on a subset of mRNAs from the human parasite Schistosoma mansoni.

A Rajkovic1, R E Davis, J N Simonsen, F M Rottman.   

Abstract

We present evidence that a subset of mRNAs in the human parasitic trematode Schistosoma mansoni contain an identical 36-nucleotide spliced leader (SL) sequence at their 5' termini. The SL is derived from a 90-nucleotide nonpolyadenylylated RNA (SL RNA), presumably by trans-splicing. Neither the SL nor the SL RNA share significant sequence identity with previously described trans-spliced leaders and SL RNAs in trypanosomatid protozoans or nematodes. However, several features, such as predicted secondary structure, trimethylguanosine cap, and potential Sm binding site, suggest similarities among SL RNAs in widely divergent organisms. Our evidence also indicates that the exon 3 acceptor site of the 3-hydroxy-3-methylglutaryl-CoA reductase gene can be spliced either to the SL by trans-splicing or to an upstream exon, 2, by cis-splicing. The presence of a SL sequence in S. mansoni, a member of the phylum Platyhelminthes, suggests that transplicing may be a common feature of other lower invertebrates.

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Year:  1990        PMID: 2247461      PMCID: PMC55063          DOI: 10.1073/pnas.87.22.8879

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  The cap of both miniexon-derived RNA and mRNA of trypanosomes is 7-methylguanosine.

Authors:  R E Sutton; J C Boothroyd
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

2.  C. elegans mRNAs acquire a spliced leader through a trans-splicing mechanism.

Authors:  S L Bektesh; D I Hirsh
Journal:  Nucleic Acids Res       Date:  1988-06-24       Impact factor: 16.971

3.  Pre-mRNA splicing by complementation with purified human U1, U2, U4/U6 and U5 snRNPs.

Authors:  A R Krainer
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

4.  Trans splicing involves a novel form of small nuclear ribonucleoprotein particles.

Authors:  J P Bruzik; K Van Doren; D Hirsh; J A Steitz
Journal:  Nature       Date:  1988-10-06       Impact factor: 49.962

5.  A 22-nucleotide spliced leader sequence in the human parasitic nematode Brugia malayi is identical to the trans-spliced leader exon in Caenorhabditis elegans.

Authors:  A M Takacs; J A Denker; K G Perrine; P A Maroney; T W Nilsen
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

6.  Schistosoma mansoni: identification and analysis of an mRNA and a gene encoding superoxide dismutase (Cu/Zn).

Authors:  M C Simurda; H van Keulen; D M Rekosh; P T LoVerde
Journal:  Exp Parasitol       Date:  1988-10       Impact factor: 2.011

7.  Trans-spliced leader RNA exists as small nuclear ribonucleoprotein particles in Caenorhabditis elegans.

Authors:  K Van Doren; D Hirsh
Journal:  Nature       Date:  1988-10-06       Impact factor: 49.962

8.  The C. elegans trans-spliced leader RNA is bound to Sm and has a trimethylguanosine cap.

Authors:  J D Thomas; R C Conrad; T Blumenthal
Journal:  Cell       Date:  1988-08-12       Impact factor: 41.582

9.  Presence of the Caenorhabditis elegans spliced leader on different mRNAs and in different genera of nematodes.

Authors:  S Bektesh; K Van Doren; D Hirsh
Journal:  Genes Dev       Date:  1988-10       Impact factor: 11.361

10.  Trypanosome mRNAs have unusual "cap 4" structures acquired by addition of a spliced leader.

Authors:  K L Perry; K P Watkins; N Agabian
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

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  56 in total

1.  mRNA 5'-leader trans-splicing in the chordates.

Authors:  A E Vandenberghe; T H Meedel; K E Hastings
Journal:  Genes Dev       Date:  2001-02-01       Impact factor: 11.361

2.  A new twist in trypanosome RNA metabolism: cis-splicing of pre-mRNA.

Authors:  G Mair; H Shi; H Li; A Djikeng; H O Aviles; J R Bishop; F H Falcone; C Gavrilescu; J L Montgomery; M I Santori; L S Stern; Z Wang; E Ullu; C Tschudi
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

3.  trans splicing of polycistronic Caenorhabditis elegans pre-mRNAs: analysis of the SL2 RNA.

Authors:  D Evans; T Blumenthal
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

4.  RNA polymerase II-dependent transcription in trypanosomes is associated with a SNAP complex-like transcription factor.

Authors:  Anish Das; Vivian Bellofatto
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

5.  Operons and SL2 trans-splicing exist in nematodes outside the genus Caenorhabditis.

Authors:  D Evans; D Zorio; M MacMorris; C E Winter; K Lea; T Blumenthal
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

6.  Genome annotation by high-throughput 5' RNA end determination.

Authors:  Byung Joon Hwang; Hans-Michael Müller; Paul W Sternberg
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-02       Impact factor: 11.205

Review 7.  trans and cis splicing in trypanosomatids: mechanism, factors, and regulation.

Authors:  Xue-hai Liang; Asaf Haritan; Shai Uliel; Shulamit Michaeli
Journal:  Eukaryot Cell       Date:  2003-10

8.  Culture of cells from two life stages of Schistosoma mansoni.

Authors:  C J Bayne; D W Barnes
Journal:  Cytotechnology       Date:  1997-01       Impact factor: 2.058

9.  Spliced leader RNA trans-splicing in dinoflagellates.

Authors:  Huan Zhang; Yubo Hou; Lilibeth Miranda; David A Campbell; Nancy R Sturm; Terry Gaasterland; Senjie Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-02       Impact factor: 11.205

10.  Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements.

Authors:  Huan Zhang; David A Campbell; Nancy R Sturm; Senjie Lin
Journal:  Mol Biol Evol       Date:  2009-04-22       Impact factor: 16.240

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