Literature DB >> 22474011

Generation of RNA molecules by a base-catalysed click-like reaction.

Giovanna Costanzo1, Raffaele Saladino, Giorgia Botta, Alessandra Giorgi, Anita Scipioni, Samanta Pino, Ernesto Di Mauro.   

Abstract

The problem of the abiotic origin of RNA from prebiotically plausible compounds remains unsolved. As a potential partial solution, we report the spontaneous polymerization of 3',5'-cyclic GMP in water, in formamide, in dimethylformamide, and (in water) in the presence of a Brønsted base such as 1,8-diazabicycloundec-7-ene. The reaction is untemplated, does not require enzymatic activities, is thermodynamically favoured and selectively yields 3',5'-bonded ribopolymers containing as many as 25 nucleotides. We propose a reaction pathway on the basis of 1) the measured stacking of the 3',5'-cyclic monomers, 2) the activation by Brønsted bases, 3) the determination (by MALDI-TOF mass spectrometry, by (31)P NMR, and by specific ribonucleases) of the molecular species produced. The reaction pathway has several of the attributes of a click-like reaction.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22474011     DOI: 10.1002/cbic.201200068

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  18 in total

1.  Meteorite-catalyzed syntheses of nucleosides and of other prebiotic compounds from formamide under proton irradiation.

Authors:  Raffaele Saladino; Eleonora Carota; Giorgia Botta; Mikhail Kapralov; Gennady N Timoshenko; Alexei Y Rozanov; Eugene Krasavin; Ernesto Di Mauro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

2.  Potential pitfalls in MALDI-TOF MS analysis of abiotically synthesized RNA oligonucleotides.

Authors:  Bradley T Burcar; Lauren M Cassidy; Elizabeth M Moriarty; Prakash C Joshi; Kristin M Coari; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2013-06-22       Impact factor: 1.950

3.  Hypothesis of Lithocoding: Origin of the Genetic Code as a "Double Jigsaw Puzzle" of Nucleobase-Containing Molecules and Amino Acids Assembled by Sequential Filling of Apatite Mineral Cellules.

Authors:  Nikolai E Skoblikow; Andrei A Zimin
Journal:  J Mol Evol       Date:  2016-04-05       Impact factor: 2.395

4.  Nucleotide Selectivity in Abiotic RNA Polymerization Reactions.

Authors:  Kristin M Coari; Rebecca C Martin; Kopal Jain; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2017-02-03       Impact factor: 1.950

Review 5.  Four Ways to Oligonucleotides Without Phosphoimidazolides.

Authors:  Judit E Šponer; Jiří Šponer; Ernesto Di Mauro
Journal:  J Mol Evol       Date:  2015-10-31       Impact factor: 2.395

6.  Escalation of polymerization in a thermal gradient.

Authors:  Christof B Mast; Severin Schink; Ulrich Gerland; Dieter Braun
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205

7.  From formamide to RNA, the path is tenuous but continuous.

Authors:  Samanta Pino; Judit E Sponer; Giovanna Costanzo; Raffaele Saladino; Ernesto Di Mauro
Journal:  Life (Basel)       Date:  2015-01-30

Review 8.  Synergism and mutualism in non-enzymatic RNA polymerization.

Authors:  Hussein Kaddour; Nita Sahai
Journal:  Life (Basel)       Date:  2014-11-03

9.  Copying of RNA Sequences without Pre-Activation.

Authors:  Mario Jauker; Helmut Griesser; Clemens Richert
Journal:  Angew Chem Int Ed Engl       Date:  2015-10-05       Impact factor: 15.336

10.  Acid-Catalyzed RNA-Oligomerization from 3',5'-cGMP.

Authors:  Sreekar Wunnava; Christina F Dirscherl; Jakub Výravský; Aleš Kovařík; Roman Matyášek; Jiří Šponer; Dieter Braun; Judit E Šponer
Journal:  Chemistry       Date:  2021-11-23       Impact factor: 5.020

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