Literature DB >> 224718

Computer simulation of metabolism in pyruvate-perfused rat heart. II. Krebs cycle.

M C Kohn, M J Achs, D Garfinkel.   

Abstract

A realistic metabolic model of the tricarboxylic acid cycle in the perfused rat heart was constructed to help explain the sequence of biochemical events regulating the metabolism of exogenous pyruvate following a large increase in work load. The unchelated Mg2+ level was the most important controlling factor. The resulting mixture of chelated and unchelated nucleotides and tribasic acids effected coordinated control of citrate synthase, aconitase, isocitrate dehydrogenase, succinyl CoA synthetase, fumarase, and nucleoside diphosphokinase, because Mg2+-chelates are generally substrates whereas unchelated species are inhibitors. Succinate dehydrogenase is largely controlled by the ubiquinone redox potential. The fluxes through alpha-ketoglutarate and malate dehydrogenases are largely dependent on thepyridine nucleotide redox potential, but the succinyl CoA-to-CoASH ratio strongly affects the former enzyme as well. The model predicts an accumulation of succinate during the transition to higher work output.

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Year:  1979        PMID: 224718     DOI: 10.1152/ajpregu.1979.237.3.R159

Source DB:  PubMed          Journal:  Am J Physiol        ISSN: 0002-9513


  10 in total

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2.  Strategies for computer modeling.

Authors:  M C Kohn
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3.  The effects of magnesium ions on the interactions of ox brain and liver glutamate dehydrogenase with ATP and GTP.

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Review 4.  Computer simulation of metabolism in palmitate-perfused rat heart. II. Behavior of complete model.

Authors:  M C Kohn; D Garfinkel
Journal:  Ann Biomed Eng       Date:  1983       Impact factor: 3.934

5.  Detailed kinetics and regulation of mammalian NAD-linked isocitrate dehydrogenase.

Authors:  Feng Qi; Xuewen Chen; Daniel A Beard
Journal:  Biochim Biophys Acta       Date:  2008-07-11

6.  Computer simulation of metabolism in palmitate-perfused rat heart. III. Sensitivity analysis.

Authors:  M C Kohn
Journal:  Ann Biomed Eng       Date:  1983       Impact factor: 3.934

7.  Detailed evaluation of pyruvate dehydrogenase complex inhibition in simulated exercise conditions.

Authors:  Bodhi A Jelinek; Michael A Moxley
Journal:  Biophys J       Date:  2021-01-28       Impact factor: 4.033

8.  Identifying Site-Specific Superoxide and Hydrogen Peroxide Production Rates From the Mitochondrial Electron Transport System Using a Computational Strategy.

Authors:  Quynh V Duong; Yan Levitsky; Maria J Dessinger; Jasiel O Strubbe-Rivera; Jason N Bazil
Journal:  Function (Oxf)       Date:  2021-09-20

9.  Identification of the kinetic mechanism of succinyl-CoA synthetase.

Authors:  Xin Li; Fan Wu; Daniel A Beard
Journal:  Biosci Rep       Date:  2013-01-18       Impact factor: 3.840

10.  Mitochondrial Mg(2+) homeostasis decides cellular energy metabolism and vulnerability to stress.

Authors:  Ryu Yamanaka; Sho Tabata; Yutaka Shindo; Kohji Hotta; Koji Suzuki; Tomoyoshi Soga; Kotaro Oka
Journal:  Sci Rep       Date:  2016-07-26       Impact factor: 4.379

  10 in total

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