Literature DB >> 22465481

High-throughput species identification of enterococci using pyrosequencing.

Rahat Zaheer1, L Jay Yanke, Deirdre Church, Edward Topp, Ronald R Read, Tim A McAllister.   

Abstract

Here we report the development and validation of an automated high-throughput pyrosequencing-based method for the reliable identification of isolated Enterococcus species. This method exploits the discrete species-specificity of hypervariable groES-EL spacer region and utilizes a universal dispensation order optimized for a wide range of Enterococcus species. Crown
Copyright © 2012. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID： 22465481     DOI： 10.1016/j.mimet.2012.03.012

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN： 0167-7012            Impact factor:   2.363


  12 in total

1.  Antimicrobial Resistance in Escherichia coli and Enterococcal Isolates From Irrigation Return Flows in a High-Desert Watershed.

Authors:  Robert S Dungan; David L Bjorneberg
Journal:  Front Microbiol       Date:  2021-05-12       Impact factor: 5.640

2.  Effect of in-feed administration and withdrawal of tylosin phosphate on antibiotic resistance in enterococci isolated from feedlot steers.

Authors:  Alicia G Beukers; Rahat Zaheer; Shaun R Cook; Kim Stanford; Alexandre V Chaves; Michael P Ward; Tim A McAllister
Journal:  Front Microbiol       Date:  2015-05-27       Impact factor: 5.640

3.  Functional screening for triclosan resistance in a wastewater metagenome and isolates of Escherichia coli and Enterococcus spp. from a large Canadian healthcare region.

Authors:  Andrew Cameron; Ruth Barbieri; Ron Read; Deirdre Church; Emelia H Adator; Rahat Zaheer; Tim A McAllister
Journal:  PLoS One       Date:  2019-01-24       Impact factor: 3.240

4.  Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum.

Authors:  Rahat Zaheer; Shaun R Cook; Ruth Barbieri; Noriko Goji; Andrew Cameron; Aaron Petkau; Rodrigo Ortega Polo; Lisa Tymensen; Courtney Stamm; Jiming Song; Sherry Hannon; Tineke Jones; Deirdre Church; Calvin W Booker; Kingsley Amoako; Gary Van Domselaar; Ron R Read; Tim A McAllister
Journal:  Sci Rep       Date:  2020-03-03       Impact factor: 4.379

5.  Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants.

Authors:  Haley Sanderson; Rodrigo Ortega-Polo; Rahat Zaheer; Noriko Goji; Kingsley K Amoako; R Stephen Brown; Anna Majury; Steven N Liss; Tim A McAllister
Journal:  BMC Microbiol       Date:  2020-01-24       Impact factor: 3.605

6.  Effect of subtherapeutic vs. therapeutic administration of macrolides on antimicrobial resistance in Mannheimia haemolytica and enterococci isolated from beef cattle.

Authors:  Rahat Zaheer; Shaun R Cook; Cassidy L Klima; Kim Stanford; Trevor Alexander; Edward Topp; Ron R Read; Tim A McAllister
Journal:  Front Microbiol       Date:  2013-05-27       Impact factor: 5.640

7.  Draft Genome Sequence of an Enterococcus thailandicus Strain Isolated from Bovine Feces.

Authors:  Alicia G Beukers; Rahat Zaheer; Noriko Goji; Shaun R Cook; Kingsley K Amoako; Alexandre V Chaves; Michael P Ward; Tim A McAllister
Journal:  Genome Announc       Date:  2016-07-21

8.  Draft Genome Sequences of 43 Enterococcus faecalis and Enterococcus faecium Isolates from a Commercial Beef Processing Plant and Retail Ground Beef.

Authors:  Devin B Holman; Katherine E Gzyl; Rahat Zaheer; Tineke H Jones; Tim A McAllister
Journal:  Microbiol Resour Announc       Date:  2019-10-17

9.  Quantification and Multidrug Resistance Profiles of Vancomycin-Resistant Enterococci Isolated from Two Wastewater Treatment Plants in the Same Municipality.

Authors:  Haley Sanderson; Rodrigo Ortega-Polo; Kevin McDermott; Geoffrey Hall; Rahat Zaheer; R Stephen Brown; Anna Majury; Tim A McAllister; Steven N Liss
Journal:  Microorganisms       Date:  2019-11-29

10.  Detection of baloxavir resistant influenza A viruses using next generation sequencing and pyrosequencing methods.

Authors:  Mira C Patel; Vasiliy P Mishin; Juan A De La Cruz; Anton Chesnokov; Ha T Nguyen; Malania M Wilson; John Barnes; Rebecca J G Kondor; David E Wentworth; Larisa V Gubareva
Journal:  Antiviral Res       Date:  2020-08-14       Impact factor: 5.970
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