Literature DB >> 22463459

Reliability of frequency and amplitude decoding in gene regulation.

Filipe Tostevin1, Wiet de Ronde, Pieter Rein ten Wolde.   

Abstract

In biochemical signaling, information is often encoded in oscillatory signals. However, the advantages of such a coding strategy over an amplitude-encoding scheme of constant signals remain unclear. Here we study the dynamics of a simple model gene promoter in response to oscillating and constant transcription factor signals. We find that in biologically relevant parameter regimes an oscillating input can produce a more constant protein level than a constant input. Our results suggest that oscillating signals may be used to minimize noise in gene regulation.

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Year:  2012        PMID: 22463459     DOI: 10.1103/PhysRevLett.108.108104

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  14 in total

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2.  Noise and information transmission in promoters with multiple internal States.

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9.  Promoter decoding of transcription factor dynamics involves a trade-off between noise and control of gene expression.

Authors:  Anders S Hansen; Erin K O'Shea
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10.  A frequency-dependent decoding mechanism for axonal length sensing.

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