Literature DB >> 22461549

De novo genome project of Cupriavidus basilensis OR16.

Mátyás Cserháti1, Balázs Kriszt, Sándor Szoboszlay, Ákos Tóth, István Szabó, András Táncsics, István Nagy, Balázs Horváth, István Nagy, József Kukolya.   

Abstract

Here we report on the complete genome sequence of Cupriavidus basilensis OR16 NCAIM BO2487. The genome of strain OR16 contains 7,534 putative coding sequences, including a large set of xenobiotics-degrading genes and a unique glucose dehydrogenase gene that is absent from other Cupriavidus genomes.

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Year:  2012        PMID： 22461549      PMCID： PMC3318459          DOI： 10.1128/JB.06752-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  Ralstonia basilensis M91-3, a denitrifying soil bacterium capable of using s-triazines as nitrogen sources.

Authors:  David M Stamper; Mark Radosevich; Kevin B Hallberg; Samuel J Traina; Olli H Tuovinen
Journal:  Can J Microbiol       Date:  2002-12       Impact factor: 2.419

2.  Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend.

Authors:  J Goris; P De Vos; T Coenye; B Hoste; D Janssens; H Brim; L Diels; M Mergeay; K Kersters; P Vandamme
Journal:  Int J Syst Evol Microbiol       Date:  2001-09       Impact factor: 2.747

3.  Complete genome sequence of the type strain Cupriavidus necator N-1.

Authors:  Anja Poehlein; Bernhard Kusian; Bärbel Friedrich; Rolf Daniel; Botho Bowien
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

4.  Genome sequence of the bioplastic-producing "Knallgas" bacterium Ralstonia eutropha H16.

Authors:  Anne Pohlmann; Wolfgang Florian Fricke; Frank Reinecke; Bernhard Kusian; Heiko Liesegang; Rainer Cramm; Thomas Eitinger; Christian Ewering; Markus Pötter; Edward Schwartz; Axel Strittmatter; Ingo Voss; Gerhard Gottschalk; Alexander Steinbüchel; Bärbel Friedrich; Botho Bowien
Journal:  Nat Biotechnol       Date:  2006-09-10       Impact factor: 54.908

5.  The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments.

Authors:  Paul J Janssen; Rob Van Houdt; Hugo Moors; Pieter Monsieurs; Nicolas Morin; Arlette Michaux; Mohammed A Benotmane; Natalie Leys; Tatiana Vallaeys; Alla Lapidus; Sébastien Monchy; Claudine Médigue; Safiyh Taghavi; Sean McCorkle; John Dunn; Daniël van der Lelie; Max Mergeay
Journal:  PLoS One       Date:  2010-05-05       Impact factor: 3.240

6.  Identification and characterization of the furfural and 5-(hydroxymethyl)furfural degradation pathways of Cupriavidus basilensis HMF14.

Authors:  Frank Koopman; Nick Wierckx; Johannes H de Winde; Harald J Ruijssenaars
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-01       Impact factor: 11.205

7.  The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader.

Authors:  Athanasios Lykidis; Danilo Pérez-Pantoja; Thomas Ledger; Kostantinos Mavromatis; Iain J Anderson; Natalia N Ivanova; Sean D Hooper; Alla Lapidus; Susan Lucas; Bernardo González; Nikos C Kyrpides
Journal:  PLoS One       Date:  2010-03-22       Impact factor: 3.240

Review 8.  Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP134.

Authors:  Danilo Pérez-Pantoja; Rodrigo De la Iglesia; Dietmar H Pieper; Bernardo González
Journal:  FEMS Microbiol Rev       Date:  2008-08-07       Impact factor: 16.408

9.  Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia.

Authors:  Claire Amadou; Géraldine Pascal; Sophie Mangenot; Michelle Glew; Cyril Bontemps; Delphine Capela; Sébastien Carrère; Stéphane Cruveiller; Carole Dossat; Aurélie Lajus; Marta Marchetti; Véréna Poinsot; Zoé Rouy; Bertrand Servin; Maged Saad; Chantal Schenowitz; Valérie Barbe; Jacques Batut; Claudine Médigue; Catherine Masson-Boivin
Journal:  Genome Res       Date:  2008-05-19       Impact factor: 9.043

10.  Aerobic mineralization of 2,6-dichlorophenol by Ralstonia sp. strain RK1.

Authors:  P Steinle; G Stucki; R Stettler; K W Hanselmann
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792
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  11 in total

1.  Insertion sequences enrichment in extreme Red sea brine pool vent.

Authors:  Ali H A Elbehery; Ramy K Aziz; Rania Siam
Journal:  Extremophiles       Date:  2016-12-03       Impact factor: 2.395

2.  The saci_2123 gene of the hyperthermoacidophile Sulfolobus acidocaldarius encodes an ATP-binding cassette multidrug transporter.

Authors:  Nuan Yang; Arnold J M Driessen
Journal:  Extremophiles       Date:  2014-08-20       Impact factor: 2.395

3.  Bioremediation of copper in sediments from a constructed wetland ex situ with the novel bacterium Cupriavidus basilensis SRS.

Authors:  Alex Kugler; Robin L Brigmon; Abby Friedman; Fanny M Coutelot; Shawn W Polson; John C Seaman; Waltena Simpson
Journal:  Sci Rep       Date:  2022-10-21       Impact factor: 4.996

4.  Biodegradation of Lignin Monomers Vanillic, p-Coumaric, and Syringic Acid by the Bacterial Strain, Sphingobacterium sp. HY-H.

Authors:  Jinxing Wang; Jidong Liang; Sha Gao
Journal:  Curr Microbiol       Date:  2018-05-10       Impact factor: 2.188

5.  Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8.

Authors:  Yan Shi; Liyuan Chai; Chongjian Tang; Zhihui Yang; Huan Zhang; Runhua Chen; Yuehui Chen; Yu Zheng
Journal:  Biotechnol Biofuels       Date:  2013-01-08       Impact factor: 6.040

6.  Connecting lignin-degradation pathway with pre-treatment inhibitor sensitivity of Cupriavidus necator.

Authors:  Wei Wang; Shihui Yang; Glendon B Hunsinger; Philip T Pienkos; David K Johnson
Journal:  Front Microbiol       Date:  2014-05-27       Impact factor: 5.640

7.  Biodegradation potential of cyano-based ionic liquid anions in a culture of Cupriavidus spp. and their in vitro enzymatic hydrolysis by nitrile hydratase.

Authors:  Jennifer Neumann; Magdalena Pawlik; Dieter Bryniok; Jorg Thöming; Stefan Stolte
Journal:  Environ Sci Pollut Res Int       Date:  2013-12-13       Impact factor: 4.223

8.  Red Sea Atlantis II brine pool nitrilase with unique thermostability profile and heavy metal tolerance.

Authors:  Sarah A Sonbol; Ari J S Ferreira; Rania Siam
Journal:  BMC Biotechnol       Date:  2016-02-11       Impact factor: 2.563

9.  Genome Sequence Analysis of the Naphthenic Acid Degrading and Metal Resistant Bacterium Cupriavidus gilardii CR3.

Authors:  Xiaoyu Wang; Meili Chen; Jingfa Xiao; Lirui Hao; David E Crowley; Zhewen Zhang; Jun Yu; Ning Huang; Mingxin Huo; Jiayan Wu
Journal:  PLoS One       Date:  2015-08-24       Impact factor: 3.240

10.  A new ochratoxin A biodegradation strategy using Cupriavidus basilensis Őr16 strain.

Authors:  Szilamér Ferenczi; Mátyás Cserháti; Csilla Krifaton; Sándor Szoboszlay; József Kukolya; Zsuzsanna Szőke; Balázs Kőszegi; Mihály Albert; Teréz Barna; Miklós Mézes; Krisztina J Kovács; Balázs Kriszt
Journal:  PLoS One       Date:  2014-10-10       Impact factor: 3.240
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