Literature DB >> 22461542

Genome sequence of extracellular-protease-producing Alishewanella jeotgali isolated from traditional Korean fermented seafood.

Jaejoon Jung1, Jongsik Chun, Woojun Park.   

Abstract

Alishewanella jeotgali MS1(T) (= KCTC 22429(T) = JCM 15561(T)) was isolated from a traditional Korean fermented seafood, gajami sikhae (jeotgal), and has been reported as a novel species. A. jeotgali was proven to have extracellular proteolytic activity, which may play an important role in the fermentation environment of food containing fish flesh. Here, we present the genome sequence of Alishewanella jeotgali MS1(T) as the first sequenced strain in the genus Alishewanella and its taxonomic relatives.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22461542      PMCID: PMC3318477          DOI: 10.1128/JB.00153-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  8 in total

1.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Polyphasic taxonomic approach in the description of Alishewanella fetalis gen. nov., sp. nov., isolated from a human foetus.

Authors:  B F Vogel; K Venkateswaran; H Christensen; E Falsen; G Christiansen; L Gram
Journal:  Int J Syst Evol Microbiol       Date:  2000-05       Impact factor: 2.747

3.  Alishewanella jeotgali sp. nov., isolated from traditional fermented food, and emended description of the genus Alishewanella.

Authors:  Min-Soo Kim; Seong Woon Roh; Young-Do Nam; Ho-Won Chang; Kyoung-Ho Kim; Mi-Ja Jung; Jung-Hye Choi; Eun-Jin Park; Jin-Woo Bae
Journal:  Int J Syst Evol Microbiol       Date:  2009-07-20       Impact factor: 2.747

4.  Alishewanella agri sp. nov., isolated from landfill soil.

Authors:  Min-Soo Kim; Seon Kyung Jo; Seong Woon Roh; Jin-Woo Bae
Journal:  Int J Syst Evol Microbiol       Date:  2009-11-06       Impact factor: 2.747

5.  Alishewanella aestuarii sp. nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella.

Authors:  Seong Woon Roh; Young-Do Nam; Ho-Won Chang; Kyoung-Ho Kim; Min-Soo Kim; Hee-Mock Oh; Jin-Woo Bae
Journal:  Int J Syst Evol Microbiol       Date:  2009-02       Impact factor: 2.747

6.  NCBI Reference Sequences: current status, policy and new initiatives.

Authors:  Kim D Pruitt; Tatiana Tatusova; William Klimke; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2008-10-16       Impact factor: 16.971

7.  The National Center for Biotechnology Information's Protein Clusters Database.

Authors:  William Klimke; Richa Agarwala; Azat Badretdin; Slava Chetvernin; Stacy Ciufo; Boris Fedorov; Boris Kiryutin; Kathleen O'Neill; Wolfgang Resch; Sergei Resenchuk; Susan Schafer; Igor Tolstoy; Tatiana Tatusova
Journal:  Nucleic Acids Res       Date:  2008-10-21       Impact factor: 16.971

8.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

  8 in total
  9 in total

1.  Comparative genomic and transcriptomic analyses reveal habitat differentiation and different transcriptional responses during pectin metabolism in Alishewanella species.

Authors:  Jaejoon Jung; Woojun Park
Journal:  Appl Environ Microbiol       Date:  2013-08-09       Impact factor: 4.792

2.  Floc Formation Reduces the pH Stress Experienced by Microorganisms Living in Alkaline Environments.

Authors:  C J Charles; S P Rout; K A Patel; S Akbar; A P Laws; B R Jackson; S A Boxall; P N Humphreys
Journal:  Appl Environ Microbiol       Date:  2017-03-02       Impact factor: 4.792

3.  Genome sequence of pectin-degrading Alishewanella agri, isolated from landfill soil.

Authors:  Jisun Kim; Jaejoon Jung; Jung-Suk Sung; Jongsik Chun; Woojun Park
Journal:  J Bacteriol       Date:  2012-09       Impact factor: 3.490

4.  The enrichment of an alkaliphilic biofilm consortia capable of the anaerobic degradation of isosaccharinic acid from cellulosic materials incubated within an anthropogenic, hyperalkaline environment.

Authors:  C J Charles; S P Rout; E J Garratt; K Patel; A P Laws; P N Humphreys
Journal:  FEMS Microbiol Ecol       Date:  2015-07-20       Impact factor: 4.194

5.  Genome sequence of pectin-degrading Alishewanella aestuarii strain B11(T), isolated from tidal flat sediment.

Authors:  Jaejoon Jung; Sungjong Choi; Jongsik Chun; Woojun Park
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490

6.  Genome sequence of the halotolerant Staphylococcus sp. strain OJ82, isolated from Korean traditional salt-fermented seafood.

Authors:  Jung-Suk Sung; Jongsik Chun; Sungjong Choi; Woojun Park
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

7.  Draft genomic sequence of a chromate- and sulfate-reducing Alishewanella strain with the ability to bioremediate Cr and Cd contamination.

Authors:  Xian Xia; Jiahong Li; Shuijiao Liao; Gaoting Zhou; Hui Wang; Liqiong Li; Biao Xu; Gejiao Wang
Journal:  Stand Genomic Sci       Date:  2016-08-05

8.  ODFM, an omics data resource from microorganisms associated with fermented foods.

Authors:  Tae Woong Whon; Seung Woo Ahn; Sungjin Yang; Joon Yong Kim; Yeon Bee Kim; Yujin Kim; Ji-Man Hong; Hojin Jung; Yoon-E Choi; Se Hee Lee; Seong Woon Roh
Journal:  Sci Data       Date:  2021-04-20       Impact factor: 6.444

9.  Application of ion torrent sequencing to the assessment of the effect of alkali ballast water treatment on microbial community diversity.

Authors:  Masanori Fujimoto; Gregory A Moyerbrailean; Sifat Noman; Jason P Gizicki; Michal L Ram; Phyllis A Green; Jeffrey L Ram
Journal:  PLoS One       Date:  2014-09-15       Impact factor: 3.240

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.