Literature DB >> 22461385

MicroRNA degradation and turnover: regulating the regulators.

Zhuo Zhang1, Yong-Wen Qin, Gary Brewer, Qing Jing.   

Abstract

MicroRNAs (miRNAs) are endogenous, small noncoding RNAs that play important regulatory roles in gene expression. The control of miRNA biogenesis has been well characterized, but their degradation is not fully understood. Recent discoveries indicate that miRNAs have a long life span in general. However, rapid turnover dynamics of miRNAs in a variety of specific cellular contexts has been documented, as well as the requirement of sequence elements for miRNA decay. Furthermore, several ribonucleases that degrade miRNAs have been identified. Here, we discuss the cellular contexts and biochemical mechanisms of miRNA decay, together with several prominent questions in this field.
Copyright © 2012 John Wiley & Sons, Ltd.

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Year:  2012        PMID: 22461385      PMCID: PMC3635675          DOI: 10.1002/wrna.1114

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  48 in total

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2.  Silencing of microRNAs in vivo with 'antagomirs'.

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3.  A hexanucleotide element directs microRNA nuclear import.

Authors:  Hun-Way Hwang; Erik A Wentzel; Joshua T Mendell
Journal:  Science       Date:  2007-01-05       Impact factor: 47.728

4.  Molecular basis for target RNA recognition and cleavage by human RISC.

Authors:  Stefan Ludwig Ameres; Javier Martinez; Renée Schroeder
Journal:  Cell       Date:  2007-07-13       Impact factor: 41.582

5.  Control of stress-dependent cardiac growth and gene expression by a microRNA.

Authors:  Eva van Rooij; Lillian B Sutherland; Xiaoxia Qi; James A Richardson; Joseph Hill; Eric N Olson
Journal:  Science       Date:  2007-03-22       Impact factor: 47.728

6.  Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs.

Authors:  Gunter Meister; Markus Landthaler; Agnieszka Patkaniowska; Yair Dorsett; Grace Teng; Thomas Tuschl
Journal:  Mol Cell       Date:  2004-07-23       Impact factor: 17.970

7.  Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs.

Authors:  Antonio J Giraldez; Yuichiro Mishima; Jason Rihel; Russell J Grocock; Stijn Van Dongen; Kunio Inoue; Anton J Enright; Alexander F Schier
Journal:  Science       Date:  2006-02-16       Impact factor: 47.728

8.  A mammalian microRNA expression atlas based on small RNA library sequencing.

Authors:  Pablo Landgraf; Mirabela Rusu; Robert Sheridan; Alain Sewer; Nicola Iovino; Alexei Aravin; Sébastien Pfeffer; Amanda Rice; Alice O Kamphorst; Markus Landthaler; Carolina Lin; Nicholas D Socci; Leandro Hermida; Valerio Fulci; Sabina Chiaretti; Robin Foà; Julia Schliwka; Uta Fuchs; Astrid Novosel; Roman-Ulrich Müller; Bernhard Schermer; Ute Bissels; Jason Inman; Quang Phan; Minchen Chien; David B Weir; Ruchi Choksi; Gabriella De Vita; Daniela Frezzetti; Hans-Ingo Trompeter; Veit Hornung; Grace Teng; Gunther Hartmann; Miklos Palkovits; Roberto Di Lauro; Peter Wernet; Giuseppe Macino; Charles E Rogler; James W Nagle; Jingyue Ju; F Nina Papavasiliou; Thomas Benzing; Peter Lichter; Wayne Tam; Michael J Brownstein; Andreas Bosio; Arndt Borkhardt; James J Russo; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

9.  Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

Authors:  Junjie Li; Zhiyong Yang; Bin Yu; Jun Liu; Xuemei Chen
Journal:  Curr Biol       Date:  2005-08-23       Impact factor: 10.834

10.  Methylation as a crucial step in plant microRNA biogenesis.

Authors:  Bin Yu; Zhiyong Yang; Junjie Li; Svetlana Minakhina; Maocheng Yang; Richard W Padgett; Ruth Steward; Xuemei Chen
Journal:  Science       Date:  2005-02-11       Impact factor: 47.728

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  62 in total

1.  Dysregulation of microRNA biogenesis in the small intestine after ethanol and burn injury.

Authors:  Niya L Morris; Adam M Hammer; Abigail R Cannon; Robin C Gagnon; Xiaoling Li; Mashkoor A Choudhry
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2017-04-09       Impact factor: 5.187

Review 2.  MicroRNA: master controllers of intracellular signaling pathways.

Authors:  Pak-Yin Lui; Dong-Yan Jin; Nigel J Stevenson
Journal:  Cell Mol Life Sci       Date:  2015-06-10       Impact factor: 9.261

3.  RNA-mediated degradation of microRNAs: A widespread viral strategy?

Authors:  Jana McCaskill; Pairoa Praihirunkit; Paul M Sharp; Amy H Buck
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 4.  MicroRNAs and Periodontal Homeostasis.

Authors:  X Luan; X Zhou; J Trombetta-eSilva; M Francis; A K Gaharwar; P Atsawasuwan; T G H Diekwisch
Journal:  J Dent Res       Date:  2017-01-09       Impact factor: 6.116

5.  Dynamics of miRNA driven feed-forward loop depends upon miRNA action mechanisms.

Authors:  Maria A Duk; Maria G Samsonova; Alexander M Samsonov
Journal:  BMC Genomics       Date:  2014-12-19       Impact factor: 3.969

6.  Challenges identifying efficacious miRNA therapeutics for cancer.

Authors:  Meirav Segal; Frank J Slack
Journal:  Expert Opin Drug Discov       Date:  2020-05-18       Impact factor: 6.098

Review 7.  MicroRNAs in kidney physiology and disease.

Authors:  Piera Trionfini; Ariela Benigni; Giuseppe Remuzzi
Journal:  Nat Rev Nephrol       Date:  2014-11-11       Impact factor: 28.314

Review 8.  MicroRNAs in the brain: it's regulatory role in neuroinflammation.

Authors:  Menaka C Thounaojam; Deepak K Kaushik; Anirban Basu
Journal:  Mol Neurobiol       Date:  2013-01-12       Impact factor: 5.590

9.  Heterogeneous Ribonucleoprotein K (hnRNP K) Binds miR-122, a Mature Liver-Specific MicroRNA Required for Hepatitis C Virus Replication.

Authors:  Baochang Fan; F X Reymond Sutandy; Guan-Da Syu; Stefani Middleton; Guanghui Yi; Kuan-Yi Lu; Chien-Sheng Chen; C Cheng Kao
Journal:  Mol Cell Proteomics       Date:  2015-09-01       Impact factor: 5.911

Review 10.  microRNAs as neuroregulators, biomarkers and therapeutic agents in neurodegenerative diseases.

Authors:  Indranil Basak; Ketan S Patil; Guido Alves; Jan Petter Larsen; Simon Geir Møller
Journal:  Cell Mol Life Sci       Date:  2015-11-25       Impact factor: 9.261

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