Literature DB >> 22449140

Evaluation of high resolution magic-angle coil spinning NMR spectroscopy for metabolic profiling of nanoliter tissue biopsies.

Alan Wong1, Beatriz Jiménez, Xiaonan Li, Elaine Holmes, Jeremy K Nicholson, John C Lindon, Dimitris Sakellariou.   

Abstract

High-resolution magic-angle sample spinning (HR-MAS) (1)H NMR spectroscopy of tissue biopsies combined with chemometric techniques has emerged as a valuable methodology for disease diagnosis and environmental assessments. However, the tissue mass required for such experiments is of the order of 10 mg, and this can compromise the metabolic evaluation because of tissue heterogeneity. Tissue availability is often a limitation for clinical studies due to histopathological requirements, which are currently the gold standard for diagnosis, for example, in the case of tumors. Here, we introduce the use of a rotating micro-NMR detector that optimizes the coil filling factor such that mass-limited samples can be measured. We show the results for measuring nanoliter volume tissue biopsies using a commercial HR-MAS probe for the first time. The method has been tested with bovine muscle and human gastric mucosal tumor tissue samples. The gain in mass sensitivity is approximate up to 17-fold, and the adequate spectral resolution (3 Hz) allows the measurement of the metabolite profiles in nanoliter volume samples, thereby limiting the ambiguity resulting from heterogeneous tissues; thus, the approach presents diagnostic potential for studies by metabonomics of mass-limited biopsies.

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Year:  2012        PMID: 22449140     DOI: 10.1021/ac300153k

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  8 in total

Review 1.  Can NMR solve some significant challenges in metabolomics?

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  J Magn Reson       Date:  2015-08-18       Impact factor: 2.229

Review 2.  Metabolic phenotyping in clinical and surgical environments.

Authors:  Jeremy K Nicholson; Elaine Holmes; James M Kinross; Ara W Darzi; Zoltan Takats; John C Lindon
Journal:  Nature       Date:  2012-11-15       Impact factor: 49.962

3.  Microfabricated inserts for magic angle coil spinning (MACS) wireless NMR spectroscopy.

Authors:  Vlad Badilita; Birgit Fassbender; Kai Kratt; Alan Wong; Christian Bonhomme; Dimitris Sakellariou; Jan G Korvink; Ulrike Wallrabe
Journal:  PLoS One       Date:  2012-08-20       Impact factor: 3.240

4.  In vivo online magnetic resonance quantification of absolute metabolite concentrations in microdialysate.

Authors:  Stefan Glöggler; Silvia Rizzitelli; Noël Pinaud; Gérard Raffard; Vanessa Zhendre; Véronique Bouchaud; Stéphane Sanchez; Guillaume Radecki; Luisa Ciobanu; Alan Wong; Yannick Crémillieux
Journal:  Sci Rep       Date:  2016-11-04       Impact factor: 4.379

5.  Capillary-Inserted Rotor Design for HRµMASNMR-Based Metabolomics on Mass-Limited Neurospheres.

Authors:  Nghia Tuan Duong; Masanori Yamato; Masayuki Nakano; Satoshi Kume; Yasuhisa Tamura; Yosky Kataoka; Alan Wong; Yusuke Nishiyama
Journal:  Molecules       Date:  2017-08-03       Impact factor: 4.411

Review 6.  Current Developments in µMAS NMR Analysis for Metabolomics.

Authors:  Covadonga Lucas-Torres; Alan Wong
Journal:  Metabolites       Date:  2019-02-06

7.  NMR-Based Metabolomics.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

8.  (1)H high resolution magic-angle coil spinning (HR-MACS) μNMR metabolic profiling of whole Saccharomyces cervisiae cells: a demonstrative study.

Authors:  Alan Wong; Céline Boutin; Pedro M Aguiar
Journal:  Front Chem       Date:  2014-06-12       Impact factor: 5.221

  8 in total

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