Literature DB >> 22446319

Telomere-targeted retrotransposons in the rice blast fungus Magnaporthe oryzae: agents of telomere instability.

John H Starnes1, David W Thornbury, Olga S Novikova, Cathryn J Rehmeyer, Mark L Farman.   

Abstract

The fungus Magnaporthe oryzae is a serious pathogen of rice and other grasses. Telomeric restriction fragments in Magnaporthe isolates that infect perennial ryegrass (prg) are hotspots for genomic rearrangement and undergo frequent, spontaneous alterations during fungal culture. The telomeres of rice-infecting isolates are very stable by comparison. Sequencing of chromosome ends from a number of prg-infecting isolates revealed two related non-LTR retrotransposons (M. oryzae Telomeric Retrotransposons or MoTeRs) inserted in the telomere repeats. This contrasts with rice pathogen telomeres that are uninterrupted by other sequences. Genetic evidence indicates that the MoTeR elements are responsible for the observed instability. MoTeRs represent a new family of telomere-targeted transposons whose members are found exclusively in fungi.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22446319      PMCID: PMC3374306          DOI: 10.1534/genetics.111.137950

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  80 in total

1.  The age and evolution of non-LTR retrotransposable elements.

Authors:  H S Malik; W D Burke; T H Eickbush
Journal:  Mol Biol Evol       Date:  1999-06       Impact factor: 16.240

2.  Targeted cloning of fungal telomeres.

Authors:  Mark L Farman
Journal:  Methods Mol Biol       Date:  2011

3.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Chromosomal polymorphism of MEL genes in some populations of Saccharomyces cerevisiae.

Authors:  G I Naumov; E S Naumova; M P Korhola
Journal:  FEMS Microbiol Lett       Date:  1995-03-15       Impact factor: 2.742

5.  The genome sequence of the rice blast fungus Magnaporthe grisea.

Authors:  Ralph A Dean; Nicholas J Talbot; Daniel J Ebbole; Mark L Farman; Thomas K Mitchell; Marc J Orbach; Michael Thon; Resham Kulkarni; Jin-Rong Xu; Huaqin Pan; Nick D Read; Yong-Hwan Lee; Ignazio Carbone; Doug Brown; Yeon Yee Oh; Nicole Donofrio; Jun Seop Jeong; Darren M Soanes; Slavica Djonovic; Elena Kolomiets; Cathryn Rehmeyer; Weixi Li; Michael Harding; Soonok Kim; Marc-Henri Lebrun; Heidi Bohnert; Sean Coughlan; Jonathan Butler; Sarah Calvo; Li-Jun Ma; Robert Nicol; Seth Purcell; Chad Nusbaum; James E Galagan; Bruce W Birren
Journal:  Nature       Date:  2005-04-21       Impact factor: 49.962

6.  Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea.

Authors:  Isabelle Fudal; Heidi U Böhnert; Didier Tharreau; Marc-Henri Lebrun
Journal:  Fungal Genet Biol       Date:  2005-09       Impact factor: 3.495

7.  Evolution and organization of a highly dynamic, subtelomeric helicase gene family in the rice blast fungus Magnaporthe grisea.

Authors:  Weimin Gao; Chang Hyun Khang; Sook-Young Park; Yong-Hwan Lee; Seogchan Kang
Journal:  Genetics       Date:  2002-09       Impact factor: 4.562

8.  Molecular population genetics of Drosophila subtelomeric DNA.

Authors:  Jennifer A Anderson; Yun S Song; Charles H Langley
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

9.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

10.  Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori.

Authors:  S Okazaki; H Ishikawa; H Fujiwara
Journal:  Mol Cell Biol       Date:  1995-08       Impact factor: 4.272

View more
  19 in total

Review 1.  A Matter of Scale and Dimensions: Chromatin of Chromosome Landmarks in the Fungi.

Authors:  Allyson A Erlendson; Steven Friedman; Michael Freitag
Journal:  Microbiol Spectr       Date:  2017-07

2.  MpSaci is a widespread gypsy-Ty3 retrotransposon highly represented by non-autonomous copies in the Moniliophthora perniciosa genome.

Authors:  Jorge F Pereira; Elza F Araújo; Sérgio H Brommonschenkel; Casley B Queiroz; Gustavo G L Costa; Marcelo F Carazzolle; Gonçalo A G Pereira; Marisa V Queiroz
Journal:  Curr Genet       Date:  2015-01-23       Impact factor: 3.886

3.  The influence of funding sources on the scientific method.

Authors:  Laura H Okagaki; Ralph A Dean
Journal:  Mol Plant Pathol       Date:  2016-06       Impact factor: 5.663

Review 4.  Genetics, genomics and evolution of ergot alkaloid diversity.

Authors:  Carolyn A Young; Christopher L Schardl; Daniel G Panaccione; Simona Florea; Johanna E Takach; Nikki D Charlton; Neil Moore; Jennifer S Webb; Jolanta Jaromczyk
Journal:  Toxins (Basel)       Date:  2015-04-14       Impact factor: 4.546

5.  On the origin of the eukaryotic chromosome: the role of noncanonical DNA structures in telomere evolution.

Authors:  Miguel Garavís; Carlos González; Alfredo Villasante
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

6.  Endonuclease domain of the Drosophila melanogaster R2 non-LTR retrotransposon and related retroelements: a new model for transposition.

Authors:  Dmitry V Mukha; Elena G Pasyukova; Tatiana V Kapelinskaya; Arina S Kagramanova
Journal:  Front Genet       Date:  2013-04-26       Impact factor: 4.599

7.  Generators of phenotypic diversity in the evolution of pathogenic microorganisms.

Authors:  Silvia Calo; R Blake Billmyre; Joseph Heitman
Journal:  PLoS Pathog       Date:  2013-03-21       Impact factor: 6.823

8.  Deciphering Genome Content and Evolutionary Relationships of Isolates from the Fungus Magnaporthe oryzae Attacking Different Host Plants.

Authors:  Hélène Chiapello; Ludovic Mallet; Cyprien Guérin; Gabriela Aguileta; Joëlle Amselem; Thomas Kroj; Enrique Ortega-Abboud; Marc-Henri Lebrun; Bernard Henrissat; Annie Gendrault; François Rodolphe; Didier Tharreau; Elisabeth Fournier
Journal:  Genome Biol Evol       Date:  2015-10-09       Impact factor: 3.416

9.  Ancient Origin of the U2 Small Nuclear RNA Gene-Targeting Non-LTR Retrotransposons Utopia.

Authors:  Kenji K Kojima; Jerzy Jurka
Journal:  PLoS One       Date:  2015-11-10       Impact factor: 3.240

10.  Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi.

Authors:  Laura H Okagaki; Cristiano C Nunes; Joshua Sailsbery; Brent Clay; Doug Brown; Titus John; Yeonyee Oh; Nelson Young; Michael Fitzgerald; Brian J Haas; Qiandong Zeng; Sarah Young; Xian Adiconis; Lin Fan; Joshua Z Levin; Thomas K Mitchell; Patricia A Okubara; Mark L Farman; Linda M Kohn; Bruce Birren; Li-Jun Ma; Ralph A Dean
Journal:  G3 (Bethesda)       Date:  2015-09-28       Impact factor: 3.154

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.