Literature DB >> 22445110

Global relative and absolute quantitation in microbial proteomics.

Andreas Otto1, Jörg Bernhardt, Michael Hecker, Dörte Becher.   

Abstract

Proteomic studies are designed to yield either qualitative information on proteins (identification, distribution, posttranslational modifications, interactions, structure and function) or quantitative information (abundance, distribution within different localizations, temporal changes in abundance due to synthesis and degradation or both). To this end these studies can draw upon a wide range of qualitative and quantitative gel-based and gel-free techniques. This review summarizes current proteomic workflows for global relative or absolute protein quantitation and their application in microbial physiology.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID： 22445110     DOI： 10.1016/j.mib.2012.02.005

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN： 1369-5274            Impact factor:   7.934


  13 in total

1.  Global relative quantification with liquid chromatography-matrix-assisted laser desorption ionization time-of-flight (LC-MALDI-TOF)--cross-validation with LTQ-Orbitrap proves reliability and reveals complementary ionization preferences.

Authors:  Bernd Hessling; Knut Büttner; Michael Hecker; Dörte Becher
Journal:  Mol Cell Proteomics       Date:  2013-06-20       Impact factor: 5.911

Review 2.  Coordination of microbial metabolism.

Authors:  Victor Chubukov; Luca Gerosa; Karl Kochanowski; Uwe Sauer
Journal:  Nat Rev Microbiol       Date:  2014-03-24       Impact factor: 60.633

3.  Quantitative Proteomics of the 2016 WHO Neisseria gonorrhoeae Reference Strains Surveys Vaccine Candidates and Antimicrobial Resistance Determinants.

Authors:  Fadi E El-Rami; Ryszard A Zielke; Teodora Wi; Aleksandra E Sikora; Magnus Unemo
Journal:  Mol Cell Proteomics       Date:  2018-10-23       Impact factor: 5.911

4.  Visual account of protein investment in cellular functions.

Authors:  Wolfram Liebermeister; Elad Noor; Avi Flamholz; Dan Davidi; Jörg Bernhardt; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-02       Impact factor: 11.205

Review 5.  Proteomics progresses in microbial physiology and clinical antimicrobial therapy.

Authors:  B Chen; D Zhang; X Wang; W Ma; S Deng; P Zhang; H Zhu; N Xu; S Liang
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-11-04       Impact factor: 3.267

Review 6.  Omics Approaches for the Study of Adaptive Immunity to Staphylococcus aureus and the Selection of Vaccine Candidates.

Authors:  Silva Holtfreter; Julia Kolata; Sebastian Stentzel; Stephanie Bauerfeind; Frank Schmidt; Nandakumar Sundaramoorthy; Barbara M Bröker
Journal:  Proteomes       Date:  2016-03-07

7.  Quantitative proteomic analysis of the Hfq-regulon in Sinorhizobium meliloti 2011.

Authors:  Patricio Sobrero; Jan-Philip Schlüter; Ulrike Lanner; Andreas Schlosser; Anke Becker; Claudio Valverde
Journal:  PLoS One       Date:  2012-10-30       Impact factor: 3.240

Review 8.  Proteomics of Neisseria gonorrhoeae: the treasure hunt for countermeasures against an old disease.

Authors:  Benjamin I Baarda; Aleksandra E Sikora
Journal:  Front Microbiol       Date:  2015-10-26       Impact factor: 5.640

Review 9.  Fungal Biofilms and Polymicrobial Diseases.

Authors:  Caroline B Costa-Orlandi; Janaina C O Sardi; Nayla S Pitangui; Haroldo C de Oliveira; Liliana Scorzoni; Mariana C Galeane; Kaila P Medina-Alarcón; Wanessa C M A Melo; Mônica Y Marcelino; Jaqueline D Braz; Ana Marisa Fusco-Almeida; Maria José S Mendes-Giannini
Journal:  J Fungi (Basel)       Date:  2017-05-10

10.  A Metabolic Labeling Strategy for Relative Protein Quantification in Clostridioides difficile.

Authors:  Anke Trautwein-Schult; Sandra Maaß; Kristina Plate; Andreas Otto; Dörte Becher
Journal:  Front Microbiol       Date:  2018-10-16       Impact factor: 5.640
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