Literature DB >> 22444594

Targeted chemical-genetic regulation of protein stability in vivo.

Susana Rodriguez1, Michael J Wolfgang.   

Abstract

Loss- and gain-of-function transgenic models are powerful tools for understanding gene function in vivo but are limited in their ability to determine relative protein requirements. To determine cell-specific, temporal, or dose requirements of complex pathways, new methodology is needed. This is particularly important for deconstructing metabolic pathways that are highly interdependent and cross-regulated. We have combined mouse conditional transgenics and synthetic posttranslational protein stabilization to produce a broadly applicable strategy to regulate protein and pathway function in a cell-autonomous manner in vivo. Here, we show how a targeted chemical-genetic strategy can be used to alter fatty acid metabolism in a reombination and small-molecule-dependent manner in live behaving transgenic mice. This provides a practical, specific, and reversible means of manipulating metabolic pathways in adult mice to provide biological insight. Copyright Â
© 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22444594      PMCID: PMC3314227          DOI: 10.1016/j.chembiol.2011.12.022

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  35 in total

1.  Investigating protein-ligand interactions with a mutant FKBP possessing a designed specificity pocket.

Authors:  W Yang; L W Rozamus; S Narula; C T Rollins; R Yuan; L J Andrade; M K Ram; T B Phillips; M R van Schravendijk; D Dalgarno; T Clackson; D A Holt
Journal:  J Med Chem       Date:  2000-03-23       Impact factor: 7.446

2.  Localization to the proteasome is sufficient for degradation.

Authors:  Daniel M Janse; Bernat Crosas; Daniel Finley; George M Church
Journal:  J Biol Chem       Date:  2004-03-23       Impact factor: 5.157

3.  Activation of malonyl-CoA decarboxylase in rat skeletal muscle by contraction and the AMP-activated protein kinase activator 5-aminoimidazole-4-carboxamide-1-beta -D-ribofuranoside.

Authors:  A K Saha; A J Schwarsin; R Roduit; F Masse; V Kaushik; K Tornheim; M Prentki; N B Ruderman
Journal:  J Biol Chem       Date:  2000-08-11       Impact factor: 5.157

4.  A chemical switch for inhibitor-sensitive alleles of any protein kinase.

Authors:  A C Bishop; J A Ubersax; D T Petsch; D P Matheos; N S Gray; J Blethrow; E Shimizu; J Z Tsien; P G Schultz; M D Rose; J L Wood; D O Morgan; K M Shokat
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

5.  Continuous fatty acid oxidation and reduced fat storage in mice lacking acetyl-CoA carboxylase 2.

Authors:  L Abu-Elheiga; M M Matzuk; K A Abo-Hashema; S J Wakil
Journal:  Science       Date:  2001-03-30       Impact factor: 47.728

6.  Hepatic expression of malonyl-CoA decarboxylase reverses muscle, liver and whole-animal insulin resistance.

Authors:  Jie An; Deborah M Muoio; Masakazu Shiota; Yuka Fujimoto; Gary W Cline; Gerald I Shulman; Timothy R Koves; Robert Stevens; David Millington; Christopher B Newgard
Journal:  Nat Med       Date:  2004-02-08       Impact factor: 53.440

7.  Site-directed integration of the cre gene mediated by Cre recombinase using a combination of mutant lox sites.

Authors:  Kimi Araki; Masatake Araki; Ken-ichi Yamamura
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

8.  Correction of multi-gene deficiency in vivo using a single 'self-cleaving' 2A peptide-based retroviral vector.

Authors:  Andrea L Szymczak; Creg J Workman; Yao Wang; Kate M Vignali; Smaroula Dilioglou; Elio F Vanin; Dario A A Vignali
Journal:  Nat Biotechnol       Date:  2004-04-04       Impact factor: 54.908

9.  Conditional protein alleles using knockin mice and a chemical inducer of dimerization.

Authors:  Kryn Stankunas; J Henri Bayle; Jason E Gestwicki; Yun-Ming Lin; Thomas J Wandless; Gerald R Crabtree
Journal:  Mol Cell       Date:  2003-12       Impact factor: 17.970

10.  Small-molecule displacement of a cryptic degron causes conditional protein degradation.

Authors:  Kimberly M Bonger; Ling-chun Chen; Corey W Liu; Thomas J Wandless
Journal:  Nat Chem Biol       Date:  2011-07-03       Impact factor: 15.040

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  10 in total

1.  We see the light: chemical-genetic protein regulation.

Authors:  Steven A Farber; Erin M Zeituni
Journal:  Chem Biol       Date:  2012-03-23

2.  Adipose fatty acid oxidation is required for thermogenesis and potentiates oxidative stress-induced inflammation.

Authors:  Jieun Lee; Jessica M Ellis; Michael J Wolfgang
Journal:  Cell Rep       Date:  2015-01-08       Impact factor: 9.423

3.  A genetically encoded metabolite sensor for malonyl-CoA.

Authors:  Jessica M Ellis; Michael J Wolfgang
Journal:  Chem Biol       Date:  2012-10-26

4.  Requirement for the Mitochondrial Pyruvate Carrier in Mammalian Development Revealed by a Hypomorphic Allelic Series.

Authors:  Caitlyn E Bowman; Liang Zhao; Thomas Hartung; Michael J Wolfgang
Journal:  Mol Cell Biol       Date:  2016-07-14       Impact factor: 4.272

5.  Tunable Protein Stabilization In Vivo Mediated by Shield-1 in Transgenic Medaka.

Authors:  Alexander Froschauer; Lisa Kube; Alexandra Kegler; Christiane Rieger; Herwig O Gutzeit
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

6.  Engineering FKBP-Based Destabilizing Domains to Build Sophisticated Protein Regulation Systems.

Authors:  Wenlin An; Rachel E Jackson; Paul Hunter; Stefanie Gögel; Michiel van Diepen; Karen Liu; Martin P Meyer; Britta J Eickholt
Journal:  PLoS One       Date:  2015-12-30       Impact factor: 3.240

7.  Chemical-genetic induction of Malonyl-CoA decarboxylase in skeletal muscle.

Authors:  Susana Rodriguez; Jessica M Ellis; Michael J Wolfgang
Journal:  BMC Biochem       Date:  2014-08-25       Impact factor: 4.059

8.  Sphingosine 1-Phosphate Activation of EGFR As a Novel Target for Meningitic Escherichia coli Penetration of the Blood-Brain Barrier.

Authors:  Xiangru Wang; Ravi Maruvada; Andrew J Morris; Jun O Liu; Michael J Wolfgang; Dong Jae Baek; Robert Bittman; Kwang Sik Kim
Journal:  PLoS Pathog       Date:  2016-10-06       Impact factor: 6.823

9.  Metabolic and tissue-specific regulation of acyl-CoA metabolism.

Authors:  Jessica M Ellis; Caitlyn E Bowman; Michael J Wolfgang
Journal:  PLoS One       Date:  2015-03-11       Impact factor: 3.240

10.  The Activity of Menkes Disease Protein ATP7A Is Essential for Redox Balance in Mitochondria.

Authors:  Ashima Bhattacharjee; Haojun Yang; Megan Duffy; Emily Robinson; Arianrhod Conrad-Antoville; Ya-Wen Lu; Tony Capps; Lelita Braiterman; Michael Wolfgang; Michael P Murphy; Ling Yi; Stephen G Kaler; Svetlana Lutsenko; Martina Ralle
Journal:  J Biol Chem       Date:  2016-05-16       Impact factor: 5.157

  10 in total

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