Literature DB >> 22442327

Comparison of TaqMan PCR assays for detection of the melioidosis agent Burkholderia pseudomallei in clinical specimens.

Mirjam Kaestli1, Leisha J Richardson, Rebecca E Colman, Apichai Tuanyok, Erin P Price, Jolene R Bowers, Mark Mayo, Erin Kelley, Meagan L Seymour, Derek S Sarovich, Talima Pearson, David M Engelthaler, David M Wagner, Paul S Keim, James M Schupp, Bart J Currie.   

Abstract

Melioidosis is an emerging infectious disease caused by the soil bacterium Burkholderia pseudomallei. In diagnostic and forensic settings, molecular detection assays need not only high sensitivity with low limits of detection but also high specificity. In a direct comparison of published and newly developed TaqMan PCR assays, we found the TTS1-orf2 assay to be superior in detecting B. pseudomallei directly from clinical specimens. The YLF/BTFC multiplex assay (targeting the Yersinia-like fimbrial/Burkholderia thailandensis-like flagellum and chemotaxis region) also showed high diagnostic sensitivity and provides additional information on possible geographic origin.

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Year:  2012        PMID： 22442327      PMCID： PMC3372170          DOI： 10.1128/JCM.06737-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  33 in total

1.  Comparison of automated and nonautomated systems for identification of Burkholderia pseudomallei.

Authors:  Peter Lowe; Catherine Engler; Robert Norton
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

Review 2.  High-throughput sequencing and clinical microbiology: progress, opportunities and challenges.

Authors:  Mark J Pallen; Nicholas J Loman; Charles W Penn
Journal:  Curr Opin Microbiol       Date:  2010-09-16       Impact factor: 7.934

3.  PCR-based identification of Burkholderia pseudomallei.

Authors:  Adam Merritt; Timothy J J Inglis; Glenys Chidlow; Gerry Harnett
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2006 Sep-Oct       Impact factor: 1.846

4.  Limit of blank, limit of detection and limit of quantitation.

Authors:  David A Armbruster; Terry Pry
Journal:  Clin Biochem Rev       Date:  2008-08

Review 5.  Melioidosis: epidemiology, pathophysiology, and management.

Authors:  Allen C Cheng; Bart J Currie
Journal:  Clin Microbiol Rev       Date:  2005-04       Impact factor: 26.132

6.  Accuracy of Burkholderia pseudomallei identification using the API 20NE system and a latex agglutination test.

Authors:  Premjit Amornchai; Wirongrong Chierakul; Vanaporn Wuthiekanun; Yuvadee Mahakhunkijcharoen; Rattanaphone Phetsouvanh; Bart J Currie; Paul N Newton; Nguyen van Vinh Chau; Surasakdi Wongratanacheewin; Nicholas P J Day; Sharon J Peacock
Journal:  J Clin Microbiol       Date:  2007-09-05       Impact factor: 5.948

7.  Loop-mediated isothermal amplification method targeting the TTS1 gene cluster for detection of Burkholderia pseudomallei and diagnosis of melioidosis.

Authors:  Narisara Chantratita; Ella Meumann; Aunchalee Thanwisai; Direk Limmathurotsakul; Vanaporn Wuthiekanun; Saran Wannapasni; Sarinna Tumapa; Nicholas P J Day; Sharon J Peacock
Journal:  J Clin Microbiol       Date:  2007-11-26       Impact factor: 5.948

8.  Use of 16S rRNA gene sequencing for rapid identification and differentiation of Burkholderia pseudomallei and B. mallei.

Authors:  Jay E Gee; Claudio T Sacchi; Mindy B Glass; Barun K De; Robbin S Weyant; Paul N Levett; Anne M Whitney; Alex R Hoffmaster; Tanja Popovic
Journal:  J Clin Microbiol       Date:  2003-10       Impact factor: 5.948

9.  Defining the true sensitivity of culture for the diagnosis of melioidosis using Bayesian latent class models.

Authors:  Direk Limmathurotsakul; Kris Jamsen; Arkhom Arayawichanont; Julie A Simpson; Lisa J White; Sue J Lee; Vanaporn Wuthiekanun; Narisara Chantratita; Allen Cheng; Nicholas P J Day; Claudio Verzilli; Sharon J Peacock
Journal:  PLoS One       Date:  2010-08-30       Impact factor: 3.240

10.  BurkDiff: a real-time PCR allelic discrimination assay for Burkholderia pseudomallei and B. mallei.

Authors:  Jolene R Bowers; David M Engelthaler; Jennifer L Ginther; Talima Pearson; Sharon J Peacock; Apichai Tuanyok; David M Wagner; Bart J Currie; Paul S Keim
Journal:  PLoS One       Date:  2010-11-12       Impact factor: 3.240
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  18 in total

1.  Adapting Microarray Gene Expression Signatures for Early Melioidosis Diagnosis.

Authors:  Ornuma Sangwichian; Toni Whistler; Arnone Nithichanon; Chidchamai Kewcharoenwong; Myint Myint Sein; Chawitar Arayanuphum; Narisara Chantratita; Ganjana Lertmemongkolchai
Journal:  J Clin Microbiol       Date:  2020-06-24       Impact factor: 5.948

2.  Reliability of automated biochemical identification of Burkholderia pseudomallei is regionally dependent.

Authors:  Yuwana Podin; Mirjam Kaestli; Nicole McMahon; Jann Hennessy; Hie Ung Ngian; Jin Shyan Wong; Anand Mohana; See Chang Wong; Timothy William; Mark Mayo; Robert W Baird; Bart J Currie
Journal:  J Clin Microbiol       Date:  2013-06-19       Impact factor: 5.948

3.  Loss of Methyltransferase Function and Increased Efflux Activity Leads to Doxycycline Resistance in Burkholderia pseudomallei.

Authors:  Jessica R Webb; Erin P Price; Bart J Currie; Derek S Sarovich
Journal:  Antimicrob Agents Chemother       Date:  2017-05-24       Impact factor: 5.191

4.  Rapid diagnostics for melioidosis: a comparative study of a novel lateral flow antigen detection assay.

Authors:  Gemma Robertson; Alanna Sorenson; Brenda Govan; Natkunam Ketheesan; Raymond Houghton; Hongjing Chen; David AuCoin; Michael Dillon; Robert Norton
Journal:  J Med Microbiol       Date:  2015-06-07       Impact factor: 2.472

5.  Comparative evaluation of Panther Fusion and real-time PCR for detection of Burkholderia pseudomallei in spiked human blood.

Authors:  Ian Gassiep; Michelle J Bauer; Melissa Page; Patrick N A Harris; Robert Norton
Journal:  Access Microbiol       Date:  2022-03-21

Review 6.  Melioidosis.

Authors:  W Joost Wiersinga; Harjeet S Virk; Alfredo G Torres; Bart J Currie; Sharon J Peacock; David A B Dance; Direk Limmathurotsakul
Journal:  Nat Rev Dis Primers       Date:  2018-02-01       Impact factor: 52.329

7.  Development and validation of Burkholderia pseudomallei-specific real-time PCR assays for clinical, environmental or forensic detection applications.

Authors:  Erin P Price; Julia L Dale; James M Cook; Derek S Sarovich; Meagan L Seymour; Jennifer L Ginther; Emily L Kaufman; Stephen M Beckstrom-Sternberg; Mark Mayo; Mirjam Kaestli; Mindy B Glass; Jay E Gee; Vanaporn Wuthiekanun; Jeffrey M Warner; Anthony Baker; Jeffrey T Foster; Patrick Tan; Apichai Tuanyok; Direk Limmathurotsakul; Sharon J Peacock; Bart J Currie; David M Wagner; Paul Keim; Talima Pearson
Journal:  PLoS One       Date:  2012-05-18       Impact factor: 3.240

8.  Variable virulence factors in Burkholderia pseudomallei (melioidosis) associated with human disease.

Authors:  Derek S Sarovich; Erin P Price; Jessica R Webb; Linda M Ward; Marcos Y Voutsinos; Apichai Tuanyok; Mark Mayo; Mirjam Kaestli; Bart J Currie
Journal:  PLoS One       Date:  2014-03-11       Impact factor: 3.240

9.  Potential immunogenic polypeptides of Burkholderia pseudomallei identified by shotgun expression library and evaluation of their efficacy for serodiagnosis of melioidosis.

Authors:  Suat Moi Puah; S D Puthucheary; Kek Heng Chua
Journal:  Int J Med Sci       Date:  2013-03-13       Impact factor: 3.738

10.  Clinical definitions of melioidosis.

Authors:  Allen C Cheng; Bart J Currie; David A B Dance; Simon G P Funnell; Direk Limmathurotsakul; Andrew J H Simpson; Sharon J Peacock
Journal:  Am J Trop Med Hyg       Date:  2013-03       Impact factor: 2.345
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