Literature DB >> 22442258

Intercellular variation in signaling through the TGF-β pathway and its relation to cell density and cell cycle phase.

Agata Zieba1, Katerina Pardali, Ola Söderberg, Lena Lindbom, Erik Nyström, Aristidis Moustakas, Carl-Henrik Heldin, Ulf Landegren.   

Abstract

Fundamental open questions in signal transduction remain concerning the sequence and distribution of molecular signaling events among individual cells. In this work, we have characterized the intercellular variability of transforming growth factor β-induced Smad interactions, providing essential information about TGF-β signaling and its dependence on the density of cell populations and the cell cycle phase. By employing the recently developed in situ proximity ligation assay, we investigated the dynamics of interactions and modifications of Smad proteins and their partners under native and physiological conditions. We analyzed the kinetics of assembly of Smad complexes and the influence of cellular environment and relation to mitosis. We report rapid kinetics of formation of Smad complexes, including native Smad2-Smad3-Smad4 trimeric complexes, in a manner influenced by the rate of proteasomal degradation of these proteins, and we found a striking cell to cell variation of signaling complexes. The single-cell analysis of TGF-β signaling in genetically unmodified cells revealed previously unknown aspects of regulation of this pathway, and it provided a basis for analysis of these signaling events to diagnose pathological perturbations in patient samples and to evaluate their susceptibility to drug treatment.

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Year:  2012        PMID: 22442258      PMCID: PMC3394940          DOI: 10.1074/mcp.M111.013482

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  30 in total

1.  The Crumbs complex couples cell density sensing to Hippo-dependent control of the TGF-β-SMAD pathway.

Authors:  Xaralabos Varelas; Payman Samavarchi-Tehrani; Masahiro Narimatsu; Alexander Weiss; Katie Cockburn; Brett G Larsen; Janet Rossant; Jeffrey L Wrana
Journal:  Dev Cell       Date:  2010-12-14       Impact factor: 12.270

2.  Cytoplasmic SnoN in normal tissues and nonmalignant cells antagonizes TGF-beta signaling by sequestration of the Smad proteins.

Authors:  Ariel R Krakowski; Julien Laboureau; Alain Mauviel; Mina J Bissell; Kunxin Luo
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-18       Impact factor: 11.205

3.  Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing.

Authors:  Savaş Tay; Jacob J Hughey; Timothy K Lee; Tomasz Lipniacki; Stephen R Quake; Markus W Covert
Journal:  Nature       Date:  2010-06-27       Impact factor: 49.962

4.  Achieving stability of lipopolysaccharide-induced NF-kappaB activation.

Authors:  Markus W Covert; Thomas H Leung; Jahlionais E Gaston; David Baltimore
Journal:  Science       Date:  2005-09-16       Impact factor: 47.728

5.  Direct observation of individual endogenous protein complexes in situ by proximity ligation.

Authors:  Ola Söderberg; Mats Gullberg; Malin Jarvius; Karin Ridderstråle; Karl-Johan Leuchowius; Jonas Jarvius; Kenneth Wester; Per Hydbring; Fuad Bahram; Lars-Gunnar Larsson; Ulf Landegren
Journal:  Nat Methods       Date:  2006-10-29       Impact factor: 28.547

6.  Transforming growth factor-beta suppresses the ability of Ski to inhibit tumor metastasis by inducing its degradation.

Authors:  Erwan Le Scolan; Qingwei Zhu; Long Wang; Abhik Bandyopadhyay; Delphine Javelaud; Alain Mauviel; LuZhe Sun; Kunxin Luo
Journal:  Cancer Res       Date:  2008-05-01       Impact factor: 12.701

Review 7.  The regulation of TGFbeta signal transduction.

Authors:  Aristidis Moustakas; Carl-Henrik Heldin
Journal:  Development       Date:  2009-11       Impact factor: 6.868

8.  Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

Authors:  Jesper V Olsen; Michiel Vermeulen; Anna Santamaria; Chanchal Kumar; Martin L Miller; Lars J Jensen; Florian Gnad; Jürgen Cox; Thomas S Jensen; Erich A Nigg; Søren Brunak; Matthias Mann
Journal:  Sci Signal       Date:  2010-01-12       Impact factor: 8.192

9.  Asymmetric mitosis: Unequal segregation of proteins destined for degradation.

Authors:  Luis C Fuentealba; Edward Eivers; Douglas Geissert; Vincent Taelman; E M De Robertis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-29       Impact factor: 11.205

10.  Arkadia activates Smad3/Smad4-dependent transcription by triggering signal-induced SnoN degradation.

Authors:  Laurence Levy; Michael Howell; Debipriya Das; Sean Harkin; Vasso Episkopou; Caroline S Hill
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

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  12 in total

1.  Proximity Ligation Assay as a Tool for Antibody Validation in Human Tissues.

Authors:  Cecilia Lindskog; Max Backman; Agata Zieba; Anna Asplund; Mathias Uhlén; Ulf Landegren; Fredrik Pontén
Journal:  J Histochem Cytochem       Date:  2020-06-30       Impact factor: 2.479

2.  Sensing relative signal in the Tgf-β/Smad pathway.

Authors:  Christopher L Frick; Clare Yarka; Harry Nunns; Lea Goentoro
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-20       Impact factor: 11.205

3.  The kinase activity of the Ser/Thr kinase BUB1 promotes TGF-β signaling.

Authors:  Shyam Nyati; Katrina Schinske-Sebolt; Sethuramasundaram Pitchiaya; Katerina Chekhovskiy; Areeb Chator; Nauman Chaudhry; Joseph Dosch; Marcian E Van Dort; Sooryanarayana Varambally; Chandan Kumar-Sinha; Mukesh Kumar Nyati; Dipankar Ray; Nils G Walter; Hongtao Yu; Brian Dale Ross; Alnawaz Rehemtulla
Journal:  Sci Signal       Date:  2015-01-06       Impact factor: 8.192

4.  Single Chain Antibodies as Tools to Study transforming growth factor-β-Regulated SMAD Proteins in Proximity Ligation-Based Pharmacological Screens.

Authors:  Andries Blokzijl; Agata Zieba; Michael Hust; Thomas Schirrmann; Saskia Helmsing; Karin Grannas; Ellen Hertz; Anita Moren; Lei Chen; Ola Söderberg; Aristidis Moustakas; Stefan Dübel; Ulf Landegren
Journal:  Mol Cell Proteomics       Date:  2016-02-29       Impact factor: 5.911

5.  In situ protein detection with enhanced specificity using DNA-conjugated antibodies and proximity ligation.

Authors:  Agata Zieba; Fredrik Ponten; Mathias Uhlén; Ulf Landegren
Journal:  Mod Pathol       Date:  2017-09-22       Impact factor: 7.842

6.  Bone Morphogenetic Protein-2 Induces Donor-Dependent Osteogenic and Adipogenic Differentiation in Human Adipose Stem Cells.

Authors:  Sari Vanhatupa; Miina Ojansivu; Reija Autio; Miia Juntunen; Susanna Miettinen
Journal:  Stem Cells Transl Med       Date:  2015-10-22       Impact factor: 6.940

7.  Role of individual MARK isoforms in phosphorylation of tau at Ser²⁶² in Alzheimer's disease.

Authors:  Gucci Jijuan Gu; Harald Lund; Di Wu; Andries Blokzijl; Christina Classon; Gabriel von Euler; Ulf Landegren; Dan Sunnemark; Masood Kamali-Moghaddam
Journal:  Neuromolecular Med       Date:  2013-05-12       Impact factor: 3.843

8.  Differential regulation of Smad3 and of the type II transforming growth factor-β receptor in mitosis: implications for signaling.

Authors:  Tal Hirschhorn; Lior Barizilay; Nechama I Smorodinsky; Marcelo Ehrlich
Journal:  PLoS One       Date:  2012-08-22       Impact factor: 3.240

9.  Tgf-β1 inhibits Cftr biogenesis and prevents functional rescue of ΔF508-Cftr in primary differentiated human bronchial epithelial cells.

Authors:  Steven M Snodgrass; Kristine M Cihil; Pamela K Cornuet; Michael M Myerburg; Agnieszka Swiatecka-Urban
Journal:  PLoS One       Date:  2013-05-09       Impact factor: 3.240

10.  Cell-specific responses to the cytokine TGFβ are determined by variability in protein levels.

Authors:  Jette Strasen; Uddipan Sarma; Marcel Jentsch; Stefan Bohn; Caibin Sheng; Daniel Horbelt; Petra Knaus; Stefan Legewie; Alexander Loewer
Journal:  Mol Syst Biol       Date:  2018-01-25       Impact factor: 11.429

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