Literature DB >> 22427488

A recurrent neural network for closed-loop intracortical brain-machine interface decoders.

David Sussillo1, Paul Nuyujukian, Joline M Fan, Jonathan C Kao, Sergey D Stavisky, Stephen Ryu, Krishna Shenoy.   

Abstract

Recurrent neural networks (RNNs) are useful tools for learning nonlinear relationships in time series data with complex temporal dependences. In this paper, we explore the ability of a simplified type of RNN, one with limited modifications to the internal weights called an echostate network (ESN), to effectively and continuously decode monkey reaches during a standard center-out reach task using a cortical brain-machine interface (BMI) in a closed loop. We demonstrate that the RNN, an ESN implementation termed a FORCE decoder (from first order reduced and controlled error learning), learns the task quickly and significantly outperforms the current state-of-the-art method, the velocity Kalman filter (VKF), using the measure of target acquire time. We also demonstrate that the FORCE decoder generalizes to a more difficult task by successfully operating the BMI in a randomized point-to-point task. The FORCE decoder is also robust as measured by the success rate over extended sessions. Finally, we show that decoded cursor dynamics are more like naturalistic hand movements than those of the VKF. Taken together, these results suggest that RNNs in general, and the FORCE decoder in particular, are powerful tools for BMI decoder applications.

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Year:  2012        PMID: 22427488      PMCID: PMC3638090          DOI: 10.1088/1741-2560/9/2/026027

Source DB:  PubMed          Journal:  J Neural Eng        ISSN: 1741-2552            Impact factor:   5.379


  38 in total

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3.  Cortical preparatory activity: representation of movement or first cog in a dynamical machine?

Authors:  Mark M Churchland; John P Cunningham; Matthew T Kaufman; Stephen I Ryu; Krishna V Shenoy
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Authors:  Gopal Santhanam; Stephen I Ryu; Byron M Yu; Afsheen Afshar; Krishna V Shenoy
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6.  A closed-loop human simulator for investigating the role of feedback control in brain-machine interfaces.

Authors:  John P Cunningham; Paul Nuyujukian; Vikash Gilja; Cindy A Chestek; Stephen I Ryu; Krishna V Shenoy
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7.  Instant neural control of a movement signal.

Authors:  Mijail D Serruya; Nicholas G Hatsopoulos; Liam Paninski; Matthew R Fellows; John P Donoghue
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8.  Neural control of computer cursor velocity by decoding motor cortical spiking activity in humans with tetraplegia.

Authors:  Sung-Phil Kim; John D Simeral; Leigh R Hochberg; John P Donoghue; Michael J Black
Journal:  J Neural Eng       Date:  2008-11-18       Impact factor: 5.379

9.  A Brain-Machine Interface Operating with a Real-Time Spiking Neural Network Control Algorithm.

Authors:  Julie Dethier; Paul Nuyujukian; Chris Eliasmith; Terry Stewart; Shauki A Elassaad; Krishna V Shenoy; Kwabena Boahen
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10.  Emergence of a stable cortical map for neuroprosthetic control.

Authors:  Karunesh Ganguly; Jose M Carmena
Journal:  PLoS Biol       Date:  2009-07-21       Impact factor: 8.029

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  42 in total

1.  Speech synthesis from ECoG using densely connected 3D convolutional neural networks.

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Journal:  J Neural Eng       Date:  2019-03-04       Impact factor: 5.379

2.  The Discriminative Kalman Filter for Bayesian Filtering with Nonlinear and Nongaussian Observation Models.

Authors:  Michael C Burkhart; David M Brandman; Brian Franco; Leigh R Hochberg; Matthew T Harrison
Journal:  Neural Comput       Date:  2020-03-18       Impact factor: 2.026

3.  Advantages of closed-loop calibration in intracortical brain-computer interfaces for people with tetraplegia.

Authors:  Beata Jarosiewicz; Nicolas Y Masse; Daniel Bacher; Sydney S Cash; Emad Eskandar; Gerhard Friehs; John P Donoghue; Leigh R Hochberg
Journal:  J Neural Eng       Date:  2013-07-10       Impact factor: 5.379

4.  A Comparison of Intention Estimation Methods for Decoder Calibration in Intracortical Brain-Computer Interfaces.

Authors:  Francis R Willett; Brian A Murphy; Daniel R Young; William D Memberg; Christine H Blabe; Chethan Pandarinath; Brian Franco; Jad Saab; Benjamin L Walter; Jennifer A Sweet; Jonathan P Miller; Jaimie M Henderson; Krishna V Shenoy; John D Simeral; Beata Jarosiewicz; Leigh R Hochberg; Robert F Kirsch; Abidemi Bolu Ajiboye
Journal:  IEEE Trans Biomed Eng       Date:  2017-12-14       Impact factor: 4.538

5.  Feedback control policies employed by people using intracortical brain-computer interfaces.

Authors:  Francis R Willett; Chethan Pandarinath; Beata Jarosiewicz; Brian A Murphy; William D Memberg; Christine H Blabe; Jad Saab; Benjamin L Walter; Jennifer A Sweet; Jonathan P Miller; Jaimie M Henderson; Krishna V Shenoy; John D Simeral; Leigh R Hochberg; Robert F Kirsch; A Bolu Ajiboye
Journal:  J Neural Eng       Date:  2016-11-30       Impact factor: 5.379

6.  Signal-independent noise in intracortical brain-computer interfaces causes movement time properties inconsistent with Fitts' law.

Authors:  Francis R Willett; Brian A Murphy; William D Memberg; Christine H Blabe; Chethan Pandarinath; Benjamin L Walter; Jennifer A Sweet; Jonathan P Miller; Jaimie M Henderson; Krishna V Shenoy; Leigh R Hochberg; Robert F Kirsch; A Bolu Ajiboye
Journal:  J Neural Eng       Date:  2017-02-08       Impact factor: 5.379

7.  Intention estimation in brain-machine interfaces.

Authors:  Joline M Fan; Paul Nuyujukian; Jonathan C Kao; Cynthia A Chestek; Stephen I Ryu; Krishna V Shenoy
Journal:  J Neural Eng       Date:  2014-02       Impact factor: 5.379

Review 8.  Sensors and decoding for intracortical brain computer interfaces.

Authors:  Mark L Homer; Arto V Nurmikko; John P Donoghue; Leigh R Hochberg
Journal:  Annu Rev Biomed Eng       Date:  2013       Impact factor: 9.590

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Journal:  Nat Med       Date:  2015-09-28       Impact factor: 53.440

Review 10.  Toward more versatile and intuitive cortical brain-machine interfaces.

Authors:  Richard A Andersen; Spencer Kellis; Christian Klaes; Tyson Aflalo
Journal:  Curr Biol       Date:  2014-09-22       Impact factor: 10.834

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