Literature DB >> 22426994

A novel group ICA approach based on multi-scale individual component clustering. Application to a large sample of fMRI data.

Mikaël Naveau1, Gaëlle Doucet, Nicolas Delcroix, Laurent Petit, Laure Zago, Fabrice Crivello, Gaël Jobard, Emmanuel Mellet, Nathalie Tzourio-Mazoyer, Bernard Mazoyer, Marc Joliot.   

Abstract

Functional connectivity-based analysis of functional magnetic resonance imaging data (fMRI) is an emerging technique for human brain mapping. One powerful method for the investigation of functional connectivity is independent component analysis (ICA) of concatenated data. However, this research field is evolving toward processing increasingly larger database taking into account inter-individual variability. Concatenated data analysis only handles these features using some additional procedures such as bootstrap or including a model of between-subject variability during the preprocessing step of the ICA. In order to alleviate these limitations, we propose a method based on group analysis of individual ICA components, using a multi-scale clustering (MICCA). MICCA start with two steps repeated several times: 1) single subject data ICA followed by 2) clustering of all subject independent components according to a spatial similarity criterion. A final third step consists in selecting reproducible clusters across the repetitions of the two previous steps. The core of the innovation lies in the multi-scale and unsupervised clustering algorithm built as a chain of three processes: robust proto-cluster creation, aggregation of the proto-clusters, and cluster consolidation. We applied MICCA to the analysis of 310 fMRI resting state dataset. MICCA identified 28 resting state brain networks. Overall, the cluster neuroanatomical substrate included 98% of the cerebrum gray matter. MICCA results proved to be reproducible in a random splitting of the data sample and more robust than the classical concatenation method.

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Year:  2012        PMID: 22426994     DOI: 10.1007/s12021-012-9145-2

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  40 in total

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Journal:  Brain Res Bull       Date:  2001-02       Impact factor: 4.077

2.  Independent component approach to the analysis of EEG and MEG recordings.

Authors:  R Vigário; J Särelä; V Jousmäki; M Hämäläinen; E Oja
Journal:  IEEE Trans Biomed Eng       Date:  2000-05       Impact factor: 4.538

Review 3.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

Review 4.  Unrest at rest: default activity and spontaneous network correlations.

Authors:  Randy L Buckner; Justin L Vincent
Journal:  Neuroimage       Date:  2007-01-25       Impact factor: 6.556

5.  Independent component model of the default-mode brain function: combining individual-level and population-level analyses in resting-state fMRI.

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6.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
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7.  A group model for stable multi-subject ICA on fMRI datasets.

Authors:  G Varoquaux; S Sadaghiani; P Pinel; A Kleinschmidt; J B Poline; B Thirion
Journal:  Neuroimage       Date:  2010-02-12       Impact factor: 6.556

8.  Anatomic localization and quantitative analysis of gradient refocused echo-planar fMRI susceptibility artifacts.

Authors:  J G Ojemann; E Akbudak; A Z Snyder; R C McKinstry; M E Raichle; T E Conturo
Journal:  Neuroimage       Date:  1997-10       Impact factor: 6.556

9.  Functional segmentation of the brain cortex using high model order group PICA.

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Journal:  Hum Brain Mapp       Date:  2009-12       Impact factor: 5.038

Review 10.  Independent component analysis of functional MRI: what is signal and what is noise?

Authors:  Martin J McKeown; Lars Kai Hansen; Terrence J Sejnowsk
Journal:  Curr Opin Neurobiol       Date:  2003-10       Impact factor: 6.627

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  5 in total

1.  Deep Learning-based Classification of Resting-state fMRI Independent-component Analysis.

Authors:  Victor Nozais; Philippe Boutinaud; Violaine Verrecchia; Marie-Fateye Gueye; Pierre-Yves Hervé; Christophe Tzourio; Bernard Mazoyer; Marc Joliot
Journal:  Neuroinformatics       Date:  2021-02-05

2.  Connectomic profiles for individualized resting state networks and regions of interest.

Authors:  Kaiming Li; Jason Langley; Zhihao Li; Xiaoping P Hu
Journal:  Brain Connect       Date:  2014-09-25

3.  Abnormal neural processing during emotional salience attribution of affective asymmetry in patients with schizophrenia.

Authors:  Seon-Koo Lee; Ji Won Chun; Jung Suk Lee; Hae-Jeong Park; Young-Chul Jung; Jeong-Ho Seok; Jae-Jin Kim
Journal:  PLoS One       Date:  2014-03-11       Impact factor: 3.240

4.  Atlas55+: Brain Functional Atlas of Resting-State Networks for Late Adulthood.

Authors:  Gaelle E Doucet; Loic Labache; Paul M Thompson; Marc Joliot; Sophia Frangou
Journal:  Cereb Cortex       Date:  2021-02-05       Impact factor: 5.357

5.  Intranasal oxytocin modulates the salience network in aging.

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Journal:  Neuroimage       Date:  2022-03-05       Impact factor: 7.400

  5 in total

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