Literature DB >> 25090040

Connectomic profiles for individualized resting state networks and regions of interest.

Kaiming Li1, Jason Langley, Zhihao Li, Xiaoping P Hu.   

Abstract

Functional connectivity analysis of human brain resting state functional magnetic resonance imaging (rsfMRI) data and resultant functional networks, or RSNs, have drawn increasing interest in both research and clinical applications. A fundamental yet challenging problem is to identify distinct functional regions or regions of interest (ROIs) that have accurate functional correspondence across subjects. This article presents an algorithmic framework to identify ROIs of common RSNs at the individual level. It first employed a dual-sparsity dictionary learning algorithm to extract group connectomic profiles of ROIs and RSNs from noisy and high-dimensional fMRI data, with special attention to the well-known inter-subject variability in anatomy and then identified the ROIs of a given individual by employing both anatomic and group connectomic profile constraints using an energy minimization approach. Applications of this framework demonstrated that it can identify individualized ROIs of RSNs with superior performance over commonly used registration methods in terms of functional correspondence, and a test-retest study revealed that the framework is robust and consistent across both short-interval and long-interval repeated sessions of the same population. These results indicate that our framework can provide accurate substrates for individualized rsfMRI analysis.

Entities:  

Keywords:  anatomical variability; connectomic profiles; cortical parcellation; dictionary learning; individualized ROIs/RSNs

Mesh:

Year:  2014        PMID: 25090040      PMCID: PMC4361391          DOI: 10.1089/brain.2014.0229

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  44 in total

1.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

2.  Dealing with the shortcomings of spatial normalization: multi-subject parcellation of fMRI datasets.

Authors:  Bertrand Thirion; Guillaume Flandin; Philippe Pinel; Alexis Roche; Philippe Ciuciu; Jean-Baptiste Poline
Journal:  Hum Brain Mapp       Date:  2006-08       Impact factor: 5.038

3.  Small-world and scale-free organization of voxel-based resting-state functional connectivity in the human brain.

Authors:  M P van den Heuvel; C J Stam; M Boersma; H E Hulshoff Pol
Journal:  Neuroimage       Date:  2008-08-22       Impact factor: 6.556

4.  Defining functional areas in individual human brains using resting functional connectivity MRI.

Authors:  Alexander L Cohen; Damien A Fair; Nico U F Dosenbach; Francis M Miezin; Donna Dierker; David C Van Essen; Bradley L Schlaggar; Steven E Petersen
Journal:  Neuroimage       Date:  2008-03-25       Impact factor: 6.556

5.  Investigating the electrophysiological basis of resting state networks using magnetoencephalography.

Authors:  Matthew J Brookes; Mark Woolrich; Henry Luckhoo; Darren Price; Joanne R Hale; Mary C Stephenson; Gareth R Barnes; Stephen M Smith; Peter G Morris
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

6.  Parcellating an individual subject's cortical and subcortical brain structures using snowball sampling of resting-state correlations.

Authors:  Gagan S Wig; Timothy O Laumann; Alexander L Cohen; Jonathan D Power; Steven M Nelson; Matthew F Glasser; Francis M Miezin; Abraham Z Snyder; Bradley L Schlaggar; Steven E Petersen
Journal:  Cereb Cortex       Date:  2013-03-08       Impact factor: 5.357

7.  Failing to deactivate: resting functional abnormalities in autism.

Authors:  Daniel P Kennedy; Elizabeth Redcay; Eric Courchesne
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-15       Impact factor: 11.205

Review 8.  Searching for a baseline: functional imaging and the resting human brain.

Authors:  D A Gusnard; M E Raichle; M E Raichle
Journal:  Nat Rev Neurosci       Date:  2001-10       Impact factor: 34.870

9.  Neurophysiological architecture of functional magnetic resonance images of human brain.

Authors:  Raymond Salvador; John Suckling; Martin R Coleman; John D Pickard; David Menon; Ed Bullmore
Journal:  Cereb Cortex       Date:  2005-01-05       Impact factor: 5.357

10.  Spatially constrained hierarchical parcellation of the brain with resting-state fMRI.

Authors:  Thomas Blumensath; Saad Jbabdi; Matthew F Glasser; David C Van Essen; Kamil Ugurbil; Timothy E J Behrens; Stephen M Smith
Journal:  Neuroimage       Date:  2013-03-21       Impact factor: 6.556

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  3 in total

1.  Can neuroimaging help aphasia researchers? Addressing generalizability, variability, and interpretability.

Authors:  Idan A Blank; Swathi Kiran; Evelina Fedorenko
Journal:  Cogn Neuropsychol       Date:  2017-11-30       Impact factor: 2.468

2.  Node Identification Using Inter-Regional Correlation Analysis for Mapping Detailed Connections in Resting State Networks.

Authors:  William S Sohn; Tae Young Lee; Kwangsun Yoo; Minah Kim; Je-Yeon Yun; Ji-Won Hur; Youngwoo Bryan Yoon; Sang Won Seo; Duk L Na; Yong Jeong; Jun Soo Kwon
Journal:  Front Neurosci       Date:  2017-05-01       Impact factor: 4.677

3.  Real-time presurgical resting-state fMRI in patients with brain tumors: Quality control and comparison with task-fMRI and intraoperative mapping.

Authors:  Kishore Vakamudi; Stefan Posse; Rex Jung; Brad Cushnyr; Muhammad O Chohan
Journal:  Hum Brain Mapp       Date:  2019-11-06       Impact factor: 5.038

  3 in total

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