Literature DB >> 22426976

Emerging technology of in situ cell free expression protein microarrays.

Amita Nand1, Anju Gautam, Javier Batista Pérez, Alejandro Merino, Jinsong Zhu.   

Abstract

Recently, in situ protein microarrays have been developed for large scale analysis and high throughput studies of proteins. In situ protein microarrays produce proteins directly on the solid surface from pre-arrayed DNA or RNA. The advances in in situ protein microarrays are exemplified by the ease of cDNA cloning and cell free protein expression. These technologies can evaluate, validate and monitor protein in a cost effective manner and address the issue of a high quality protein supply to use in the array. Here we review the importance of recently employed methods: PISA (protein in situ array), DAPA (DNA array to protein array), NAPPA (nucleic acid programmable protein array) and TUSTER microarrays and the role of these methods in proteomics.

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Year:  2012        PMID: 22426976      PMCID: PMC4875412          DOI: 10.1007/s13238-012-2012-y

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  35 in total

1.  A secreted protein microarray platform for extracellular protein interaction discovery.

Authors:  Sree R Ramani; Irene Tom; Nicholas Lewin-Koh; Bernd Wranik; Laura Depalatis; Jianjun Zhang; Dan Eaton; Lino C Gonzalez
Journal:  Anal Biochem       Date:  2011-09-21       Impact factor: 3.365

2.  Surface initiated polymerization from substrates of low initiator density and its applications in biosensors.

Authors:  Hongwei Ma; Jian'an He; Xing Liu; Jianhong Gan; Gang Jin; Jiahai Zhou
Journal:  ACS Appl Mater Interfaces       Date:  2010-10-13       Impact factor: 9.229

3.  The past, present and future of cell-free protein synthesis.

Authors:  Federico Katzen; Geoffrey Chang; Wieslaw Kudlicki
Journal:  Trends Biotechnol       Date:  2005-03       Impact factor: 19.536

4.  Surface plasmon resonance imaging-based protein array chip system for monitoring a hexahistidine-tagged protein during expression and purification.

Authors:  Hyeon-Su Ro; Sun Ok Jung; Byung Hoon Kho; Hyung Pyo Hong; Jae Sung Lee; Yong-Beom Shin; Min Gon Kim; Bong Hyun Chung
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

5.  Protein microarray signature of autoantibody biomarkers for the early detection of breast cancer.

Authors:  Karen S Anderson; Sahar Sibani; Garrick Wallstrom; Ji Qiu; Eliseo A Mendoza; Jacob Raphael; Eugenie Hainsworth; Wagner R Montor; Jessica Wong; Jin G Park; Naa Lokko; Tanya Logvinenko; Niroshan Ramachandran; Andrew K Godwin; Jeffrey Marks; Paul Engstrom; Joshua Labaer
Journal:  J Proteome Res       Date:  2010-11-23       Impact factor: 4.466

6.  Efficient disulfide bond formation in virus-like particles.

Authors:  Bradley C Bundy; James R Swartz
Journal:  J Biotechnol       Date:  2011-04-23       Impact factor: 3.307

7.  Autoantibody signatures in prostate cancer.

Authors:  Xiaoju Wang; Jianjun Yu; Arun Sreekumar; Sooryanarayana Varambally; Ronglai Shen; Donald Giacherio; Rohit Mehra; James E Montie; Kenneth J Pienta; Martin G Sanda; Philip W Kantoff; Mark A Rubin; John T Wei; Debashis Ghosh; Arul M Chinnaiyan
Journal:  N Engl J Med       Date:  2005-09-22       Impact factor: 91.245

8.  Quantitative serum proteomics from surface plasmon resonance imaging.

Authors:  Christopher Lausted; Zhiyuan Hu; Leroy Hood
Journal:  Mol Cell Proteomics       Date:  2008-08-03       Impact factor: 5.911

9.  Self-assembling protein microarrays.

Authors:  Niroshan Ramachandran; Eugenie Hainsworth; Bhupinder Bhullar; Samuel Eisenstein; Benjamin Rosen; Albert Y Lau; Johannes C Walter; Joshua LaBaer
Journal:  Science       Date:  2004-07-02       Impact factor: 47.728

10.  A systematic approach for testing expression of human full-length proteins in cell-free expression systems.

Authors:  Claudia Langlais; Birgit Guilleaume; Nadja Wermke; Tina Scheuermann; Lars Ebert; Joshua LaBaer; Bernhard Korn
Journal:  BMC Biotechnol       Date:  2007-10-03       Impact factor: 2.563

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  7 in total

Review 1.  Minireview: progress and challenges in proteomics data management, sharing, and integration.

Authors:  Lauren B Becnel; Neil J McKenna
Journal:  Mol Endocrinol       Date:  2012-08-17

2.  Nonenzymatic Protein Acetylation Detected by NAPPA Protein Arrays.

Authors:  Adam S Olia; Kristi Barker; Cheryl E McCullough; Hsin-Yao Tang; David W Speicher; Ji Qiu; Joshua LaBaer; Ronen Marmorstein
Journal:  ACS Chem Biol       Date:  2015-06-23       Impact factor: 5.100

3.  A Contra Capture Protein Array Platform for Studying Post-translationally Modified (PTM) Auto-antigenomes.

Authors:  Kailash Karthikeyan; Kristi Barker; Yanyang Tang; Peter Kahn; Peter Wiktor; Al Brunner; Vinicius Knabben; Bharath Takulapalli; Jane Buckner; Gerald Nepom; Joshua LaBaer; Ji Qiu
Journal:  Mol Cell Proteomics       Date:  2016-05-02       Impact factor: 5.911

Review 4.  Cell-free protein synthesis: the state of the art.

Authors:  James W Whittaker
Journal:  Biotechnol Lett       Date:  2012-10-21       Impact factor: 2.461

5.  Qualifying a eukaryotic cell-free system for fluorescence based GPCR analyses.

Authors:  Anne Zemella; Solveig Grossmann; Rita Sachse; Andrei Sonnabend; Michael Schaefer; Stefan Kubick
Journal:  Sci Rep       Date:  2017-06-16       Impact factor: 4.379

6.  Cell-free synthesis of isotopically labelled peptide ligands for the functional characterization of G protein-coupled receptors.

Authors:  Lisa Joedicke; Raphael Trenker; Julian D Langer; Hartmut Michel; Julia Preu
Journal:  FEBS Open Bio       Date:  2015-12-29       Impact factor: 2.693

7.  Development of repeatable arrays of proteins using immobilized DNA microplate (RAPID-M) technology.

Authors:  Nur Suhanawati Ashaari; Suganti Ramarad; Dzulaikha Khairuddin; Nor Azurah Mat Akhir; Yuka Hara; Nor Muhammad Mahadi; Rahmah Mohamed; Sheila Nathan
Journal:  BMC Res Notes       Date:  2015-11-12
  7 in total

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