Literature DB >> 22420855

The secret lives of mycobacteriophages.

Graham F Hatfull1.   

Abstract

The study of mycobacteriophages provides insights into viral diversity and evolution, as well as the genetics and physiology of their pathogenic hosts. Genomic characterization of 80 mycobacteriophages reveals a high degree of genetic diversity and an especially rich reservoir of interesting genes. These include a vast number of genes of unknown function that do not match known database entries and many genes whose functions can be predicted but which are not typically found as components of phage genomes. Thus many mysteries surround these genomes, such as why the genes are there, what do they do, how are they expressed and regulated, how do they influence the physiology of the host bacterium, and what forces of evolution directed them to their genomic homes? Although the genetic diversity and novelty of these phages is full of intrigue, it is a godsend for the mycobacterial geneticist, presenting an abundantly rich toolbox that can be exploited to devise new and effective ways for understanding the genetics and physiology of human tuberculosis. As the number of sequenced genomes continues to grow, their mysteries continue to thicken, and the time has come to learn more about the secret lives of mycobacteriophages. Copyright Â
© 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22420855     DOI: 10.1016/B978-0-12-394621-8.00015-7

Source DB:  PubMed          Journal:  Adv Virus Res        ISSN: 0065-3527            Impact factor:   9.937


  66 in total

1.  Cluster M mycobacteriophages Bongo, PegLeg, and Rey with unusually large repertoires of tRNA isotypes.

Authors:  Welkin H Pope; Kirk R Anders; Madison Baird; Charles A Bowman; Michelle M Boyle; Gregory W Broussard; Tiffany Chow; Kari L Clase; Shannon Cooper; Kathleen A Cornely; Randall J DeJong; Veronique A Delesalle; Lisa Deng; David Dunbar; Nicholas P Edgington; Christina M Ferreira; Kathleen Weston Hafer; Grant A Hartzog; J Robert Hatherill; Lee E Hughes; Khristina Ipapo; Greg P Krukonis; Christopher G Meier; Denise L Monti; Matthew R Olm; Shallee T Page; Craig L Peebles; Claire A Rinehart; Michael R Rubin; Daniel A Russell; Erin R Sanders; Morgan Schoer; Christopher D Shaffer; James Wherley; Edwin Vazquez; Han Yuan; Daiyuan Zhang; Steven G Cresawn; Deborah Jacobs-Sera; Roger W Hendrix; Graham F Hatfull
Journal:  J Virol       Date:  2013-12-11       Impact factor: 5.103

2.  Generation of affinity-tagged fluoromycobacteriophages by mixed assembly of phage capsids.

Authors:  Mariana Piuri; Liliana Rondón; Estefanía Urdániz; Graham F Hatfull
Journal:  Appl Environ Microbiol       Date:  2013-07-12       Impact factor: 4.792

Review 3.  Dark Matter of the Biosphere: the Amazing World of Bacteriophage Diversity.

Authors:  Graham F Hatfull
Journal:  J Virol       Date:  2015-05-27       Impact factor: 5.103

4.  Mycobacteriophage-repressor-mediated immunity as a selectable genetic marker: Adephagia and BPs repressor selection.

Authors:  Zaritza O Petrova; Gregory W Broussard; Graham F Hatfull
Journal:  Microbiology       Date:  2015-06-11       Impact factor: 2.777

5.  Snapshot of haloarchaeal tailed virus genomes.

Authors:  Ana Senčilo; Deborah Jacobs-Sera; Daniel A Russell; Ching-Chung Ko; Charles A Bowman; Nina S Atanasova; Eija Österlund; Hanna M Oksanen; Dennis H Bamford; Graham F Hatfull; Elina Roine; Roger W Hendrix
Journal:  RNA Biol       Date:  2013-03-07       Impact factor: 4.652

6.  Prophage-mediated defence against viral attack and viral counter-defence.

Authors:  Rebekah M Dedrick; Deborah Jacobs-Sera; Carlos A Guerrero Bustamante; Rebecca A Garlena; Travis N Mavrich; Welkin H Pope; Juan C Cervantes Reyes; Daniel A Russell; Tamarah Adair; Richard Alvey; J Alfred Bonilla; Jerald S Bricker; Bryony R Brown; Deanna Byrnes; Steven G Cresawn; William B Davis; Leon A Dickson; Nicholas P Edgington; Ann M Findley; Urszula Golebiewska; Julianne H Grose; Cory F Hayes; Lee E Hughes; Keith W Hutchison; Sharon Isern; Allison A Johnson; Margaret A Kenna; Karen K Klyczek; Catherine M Mageeney; Scott F Michael; Sally D Molloy; Matthew T Montgomery; James Neitzel; Shallee T Page; Marie C Pizzorno; Marianne K Poxleitner; Claire A Rinehart; Courtney J Robinson; Michael R Rubin; Joseph N Teyim; Edwin Vazquez; Vassie C Ware; Jacqueline Washington; Graham F Hatfull
Journal:  Nat Microbiol       Date:  2017-01-09       Impact factor: 17.745

7.  The structure of Xis reveals the basis for filament formation and insight into DNA bending within a mycobacteriophage intasome.

Authors:  Shweta Singh; Joseph G Plaks; Nicholas J Homa; Christopher G Amrich; Annie Héroux; Graham F Hatfull; Andrew P VanDemark
Journal:  J Mol Biol       Date:  2013-10-07       Impact factor: 5.469

8.  Viral tagging reveals discrete populations in Synechococcus viral genome sequence space.

Authors:  Li Deng; J Cesar Ignacio-Espinoza; Ann C Gregory; Bonnie T Poulos; Joshua S Weitz; Philip Hugenholtz; Matthew B Sullivan
Journal:  Nature       Date:  2014-07-13       Impact factor: 49.962

9.  Mutational analysis of the mycobacteriophage BPs promoter PR reveals context-dependent sequences for mycobacterial gene expression.

Authors:  Lauren M Oldfield; Graham F Hatfull
Journal:  J Bacteriol       Date:  2014-08-04       Impact factor: 3.490

10.  The first structure of a mycobacteriophage, the Mycobacterium abscessus subsp. bolletii phage Araucaria.

Authors:  Mohamed Sassi; Cecilia Bebeacua; Michel Drancourt; Christian Cambillau
Journal:  J Virol       Date:  2013-05-15       Impact factor: 5.103

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