Literature DB >> 22416119

Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing.

Ronnie de Jonge1, H Peter van Esse, Karunakaran Maruthachalam, Melvin D Bolton, Parthasarathy Santhanam, Mojtaba Keykha Saber, Zhao Zhang, Toshiyuki Usami, Bart Lievens, Krishna V Subbarao, Bart P H J Thomma.   

Abstract

Fungal plant pathogens secrete effector molecules to establish disease on their hosts, and plants in turn use immune receptors to try to intercept these effectors. The tomato immune receptor Ve1 governs resistance to race 1 strains of the soil-borne vascular wilt fungi Verticillium dahliae and Verticillium albo-atrum, but the corresponding Verticillium effector remained unknown thus far. By high-throughput population genome sequencing, a single 50-Kb sequence stretch was identified that only occurs in race 1 strains, and subsequent transcriptome sequencing of Verticillium-infected Nicotiana benthamiana plants revealed only a single highly expressed ORF in this region, designated Ave1 (for Avirulence on Ve1 tomato). Functional analyses confirmed that Ave1 activates Ve1-mediated resistance and demonstrated that Ave1 markedly contributes to fungal virulence, not only on tomato but also on Arabidopsis. Interestingly, Ave1 is homologous to a widespread family of plant natriuretic peptides. Besides plants, homologous proteins were only found in the bacterial plant pathogen Xanthomonas axonopodis and the plant pathogenic fungi Colletotrichum higginsianum, Cercospora beticola, and Fusarium oxysporum f. sp. lycopersici. The distribution of Ave1 homologs, coincident with the presence of Ave1 within a flexible genomic region, strongly suggests that Verticillium acquired Ave1 from plants through horizontal gene transfer. Remarkably, by transient expression we show that also the Ave1 homologs from F. oxysporum and C. beticola can activate Ve1-mediated resistance. In line with this observation, Ve1 was found to mediate resistance toward F. oxysporum in tomato, showing that this immune receptor is involved in resistance against multiple fungal pathogens.

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Year:  2012        PMID: 22416119      PMCID: PMC3323992          DOI: 10.1073/pnas.1119623109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  Expansin-like molecules: novel functions derived from common domains.

Authors:  N N Ludidi; J L Heazlewood; C Seoighe; H R Irving; C A Gehring
Journal:  J Mol Evol       Date:  2002-05       Impact factor: 2.395

2.  The genome sequence of the rice blast fungus Magnaporthe grisea.

Authors:  Ralph A Dean; Nicholas J Talbot; Daniel J Ebbole; Mark L Farman; Thomas K Mitchell; Marc J Orbach; Michael Thon; Resham Kulkarni; Jin-Rong Xu; Huaqin Pan; Nick D Read; Yong-Hwan Lee; Ignazio Carbone; Doug Brown; Yeon Yee Oh; Nicole Donofrio; Jun Seop Jeong; Darren M Soanes; Slavica Djonovic; Elena Kolomiets; Cathryn Rehmeyer; Weixi Li; Michael Harding; Soonok Kim; Marc-Henri Lebrun; Heidi Bohnert; Sean Coughlan; Jonathan Butler; Sarah Calvo; Li-Jun Ma; Robert Nicol; Seth Purcell; Chad Nusbaum; James E Galagan; Bruce W Birren
Journal:  Nature       Date:  2005-04-21       Impact factor: 49.962

3.  Multiple avirulence paralogues in cereal powdery mildew fungi may contribute to parasite fitness and defeat of plant resistance.

Authors:  Christopher J Ridout; Pari Skamnioti; Oliver Porritt; Soledad Sacristan; Jonathan D G Jones; James K M Brown
Journal:  Plant Cell       Date:  2006-08-11       Impact factor: 11.277

4.  Tomato Ve disease resistance genes encode cell surface-like receptors.

Authors:  L M Kawchuk; J Hachey; D R Lynch; F Kulcsar; G van Rooijen; D R Waterer; A Robertson; E Kokko; R Byers; R J Howard; R Fischer; D Prufer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-01       Impact factor: 11.205

5.  Cladosporium fulvum overcomes Cf-2-mediated resistance by producing truncated AVR2 elicitor proteins.

Authors:  Rianne Luderer; Frank L W Takken; Pierre J G M de Wit; Matthieu H A J Joosten
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

6.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.

Authors:  Brian J Haas; Sophien Kamoun; Michael C Zody; Rays H Y Jiang; Robert E Handsaker; Liliana M Cano; Manfred Grabherr; Chinnappa D Kodira; Sylvain Raffaele; Trudy Torto-Alalibo; Tolga O Bozkurt; Audrey M V Ah-Fong; Lucia Alvarado; Vicky L Anderson; Miles R Armstrong; Anna Avrova; Laura Baxter; Jim Beynon; Petra C Boevink; Stephanie R Bollmann; Jorunn I B Bos; Vincent Bulone; Guohong Cai; Cahid Cakir; James C Carrington; Megan Chawner; Lucio Conti; Stefano Costanzo; Richard Ewan; Noah Fahlgren; Michael A Fischbach; Johanna Fugelstad; Eleanor M Gilroy; Sante Gnerre; Pamela J Green; Laura J Grenville-Briggs; John Griffith; Niklaus J Grünwald; Karolyn Horn; Neil R Horner; Chia-Hui Hu; Edgar Huitema; Dong-Hoon Jeong; Alexandra M E Jones; Jonathan D G Jones; Richard W Jones; Elinor K Karlsson; Sridhara G Kunjeti; Kurt Lamour; Zhenyu Liu; Lijun Ma; Daniel Maclean; Marcus C Chibucos; Hayes McDonald; Jessica McWalters; Harold J G Meijer; William Morgan; Paul F Morris; Carol A Munro; Keith O'Neill; Manuel Ospina-Giraldo; Andrés Pinzón; Leighton Pritchard; Bernard Ramsahoye; Qinghu Ren; Silvia Restrepo; Sourav Roy; Ari Sadanandom; Alon Savidor; Sebastian Schornack; David C Schwartz; Ulrike D Schumann; Ben Schwessinger; Lauren Seyer; Ted Sharpe; Cristina Silvar; Jing Song; David J Studholme; Sean Sykes; Marco Thines; Peter J I van de Vondervoort; Vipaporn Phuntumart; Stephan Wawra; Rob Weide; Joe Win; Carolyn Young; Shiguo Zhou; William Fry; Blake C Meyers; Pieter van West; Jean Ristaino; Francine Govers; Paul R J Birch; Stephen C Whisson; Howard S Judelson; Chad Nusbaum
Journal:  Nature       Date:  2009-09-09       Impact factor: 49.962

7.  Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis.

Authors:  Brett M Tyler; Sucheta Tripathy; Xuemin Zhang; Paramvir Dehal; Rays H Y Jiang; Andrea Aerts; Felipe D Arredondo; Laura Baxter; Douda Bensasson; Jim L Beynon; Jarrod Chapman; Cynthia M B Damasceno; Anne E Dorrance; Daolong Dou; Allan W Dickerman; Inna L Dubchak; Matteo Garbelotto; Mark Gijzen; Stuart G Gordon; Francine Govers; Niklaus J Grunwald; Wayne Huang; Kelly L Ivors; Richard W Jones; Sophien Kamoun; Konstantinos Krampis; Kurt H Lamour; Mi-Kyung Lee; W Hayes McDonald; Mónica Medina; Harold J G Meijer; Eric K Nordberg; Donald J Maclean; Manuel D Ospina-Giraldo; Paul F Morris; Vipaporn Phuntumart; Nicholas H Putnam; Sam Rash; Jocelyn K C Rose; Yasuko Sakihama; Asaf A Salamov; Alon Savidor; Chantel F Scheuring; Brian M Smith; Bruno W S Sobral; Astrid Terry; Trudy A Torto-Alalibo; Joe Win; Zhanyou Xu; Hongbin Zhang; Igor V Grigoriev; Daniel S Rokhsar; Jeffrey L Boore
Journal:  Science       Date:  2006-09-01       Impact factor: 47.728

8.  Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens.

Authors:  Steven J Klosterman; Krishna V Subbarao; Seogchan Kang; Paola Veronese; Scott E Gold; Bart P H J Thomma; Zehua Chen; Bernard Henrissat; Yong-Hwan Lee; Jongsun Park; Maria D Garcia-Pedrajas; Dez J Barbara; Amy Anchieta; Ronnie de Jonge; Parthasarathy Santhanam; Karunakaran Maruthachalam; Zahi Atallah; Stefan G Amyotte; Zahi Paz; Patrik Inderbitzin; Ryan J Hayes; David I Heiman; Sarah Young; Qiandong Zeng; Reinhard Engels; James Galagan; Christina A Cuomo; Katherine F Dobinson; Li-Jun Ma
Journal:  PLoS Pathog       Date:  2011-07-28       Impact factor: 6.823

9.  Coevolution between a family of parasite virulence effectors and a class of LINE-1 retrotransposons.

Authors:  Soledad Sacristán; Marielle Vigouroux; Carsten Pedersen; Pari Skamnioti; Hans Thordal-Christensen; Cristina Micali; James K M Brown; Christopher J Ridout
Journal:  PLoS One       Date:  2009-10-15       Impact factor: 3.240

10.  TopHat: discovering splice junctions with RNA-Seq.

Authors:  Cole Trapnell; Lior Pachter; Steven L Salzberg
Journal:  Bioinformatics       Date:  2009-03-16       Impact factor: 6.937

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  166 in total

1.  Endoplasmic reticulum-quality control chaperones facilitate the biogenesis of Cf receptor-like proteins involved in pathogen resistance of tomato.

Authors:  Thomas W H Liebrand; Patrick Smit; Ahmed Abd-El-Haliem; Ronnie de Jonge; Jan H G Cordewener; Antoine H P America; Jan Sklenar; Alexandra M E Jones; Silke Robatzek; Bart P H J Thomma; Wladimir I L Tameling; Matthieu H A J Joosten
Journal:  Plant Physiol       Date:  2012-05-30       Impact factor: 8.340

2.  Long-Read Annotation: Automated Eukaryotic Genome Annotation Based on Long-Read cDNA Sequencing.

Authors:  David E Cook; Jose Espejo Valle-Inclan; Alice Pajoro; Hanna Rovenich; Bart P H J Thomma; Luigi Faino
Journal:  Plant Physiol       Date:  2018-11-06       Impact factor: 8.340

3.  Identification of I-7 expands the repertoire of genes for resistance to Fusarium wilt in tomato to three resistance gene classes.

Authors:  Yvonne Gonzalez-Cendales; Ann-Maree Catanzariti; Barbara Baker; Des J Mcgrath; David A Jones
Journal:  Mol Plant Pathol       Date:  2015-09-18       Impact factor: 5.663

Review 4.  Evolution and genome architecture in fungal plant pathogens.

Authors:  Mareike Möller; Eva H Stukenbrock
Journal:  Nat Rev Microbiol       Date:  2017-08-07       Impact factor: 60.633

5.  A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements.

Authors:  Fanny E Hartmann; Andrea Sánchez-Vallet; Bruce A McDonald; Daniel Croll
Journal:  ISME J       Date:  2017-01-24       Impact factor: 10.302

Review 6.  From Chaos to Harmony: Responses and Signaling upon Microbial Pattern Recognition.

Authors:  Xiao Yu; Baomin Feng; Ping He; Libo Shan
Journal:  Annu Rev Phytopathol       Date:  2017-05-19       Impact factor: 13.078

Review 7.  Receptor Kinases in Plant-Pathogen Interactions: More Than Pattern Recognition.

Authors:  Dingzhong Tang; Guoxun Wang; Jian-Min Zhou
Journal:  Plant Cell       Date:  2017-03-16       Impact factor: 11.277

8.  Antagonistic function of the Ve R-genes in tomato.

Authors:  Ross N Nazar; Xin Xu; Alexander Kurosky; Jane Robb
Journal:  Plant Mol Biol       Date:  2018-08-18       Impact factor: 4.076

9.  Tobacco Rattle Virus-Based Silencing of Enoyl-CoA Reductase Gene and Its Role in Resistance Against Cotton Wilt Disease.

Authors:  Roma Mustafa; Muhammad Hamza; Hira Kamal; Shahid Mansoor; Jodi Scheffler; Imran Amin
Journal:  Mol Biotechnol       Date:  2017-07       Impact factor: 2.695

10.  Identification of quantitative trait loci for resistance to Verticillium wilt and yield parameters in hop (Humulus lupulus L.).

Authors:  Jernej Jakse; Andreja Cerenak; Sebastjan Radisek; Zlatko Satovic; Zlata Luthar; Branka Javornik
Journal:  Theor Appl Genet       Date:  2013-02-20       Impact factor: 5.699

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