Literature DB >> 16946064

Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis.

Brett M Tyler1, Sucheta Tripathy, Xuemin Zhang, Paramvir Dehal, Rays H Y Jiang, Andrea Aerts, Felipe D Arredondo, Laura Baxter, Douda Bensasson, Jim L Beynon, Jarrod Chapman, Cynthia M B Damasceno, Anne E Dorrance, Daolong Dou, Allan W Dickerman, Inna L Dubchak, Matteo Garbelotto, Mark Gijzen, Stuart G Gordon, Francine Govers, Niklaus J Grunwald, Wayne Huang, Kelly L Ivors, Richard W Jones, Sophien Kamoun, Konstantinos Krampis, Kurt H Lamour, Mi-Kyung Lee, W Hayes McDonald, Mónica Medina, Harold J G Meijer, Eric K Nordberg, Donald J Maclean, Manuel D Ospina-Giraldo, Paul F Morris, Vipaporn Phuntumart, Nicholas H Putnam, Sam Rash, Jocelyn K C Rose, Yasuko Sakihama, Asaf A Salamov, Alon Savidor, Chantel F Scheuring, Brian M Smith, Bruno W S Sobral, Astrid Terry, Trudy A Torto-Alalibo, Joe Win, Zhanyou Xu, Hongbin Zhang, Igor V Grigoriev, Daniel S Rokhsar, Jeffrey L Boore.   

Abstract

Draft genome sequences have been determined for the soybean pathogen Phytophthora sojae and the sudden oak death pathogen Phytophthora ramorum. Oömycetes such as these Phytophthora species share the kingdom Stramenopila with photosynthetic algae such as diatoms, and the presence of many Phytophthora genes of probable phototroph origin supports a photosynthetic ancestry for the stramenopiles. Comparison of the two species' genomes reveals a rapid expansion and diversification of many protein families associated with plant infection such as hydrolases, ABC transporters, protein toxins, proteinase inhibitors, and, in particular, a superfamily of 700 proteins with similarity to known oömycete avirulence genes.

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Year:  2006        PMID: 16946064     DOI: 10.1126/science.1128796

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  383 in total

1.  Phytophthora infestans effector AVRblb2 prevents secretion of a plant immune protease at the haustorial interface.

Authors:  Tolga O Bozkurt; Sebastian Schornack; Joe Win; Takayuki Shindo; Muhammad Ilyas; Ricardo Oliva; Liliana M Cano; Alexandra M E Jones; Edgar Huitema; Renier A L van der Hoorn; Sophien Kamoun
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  Comparative structural and functional characterization of putative protein effectors belonging to the PcF toxin family from Phytophthora spp.

Authors:  Giuseppe Orsomando; Lucia Brunetti; Kathleen Pucci; Barbara Ruggeri; Silverio Ruggieri
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

3.  Plant ABC Transporters.

Authors:  Joohyun Kang; Jiyoung Park; Hyunju Choi; Bo Burla; Tobias Kretzschmar; Youngsook Lee; Enrico Martinoia
Journal:  Arabidopsis Book       Date:  2011-12-06

4.  Preparation of megabase-sized DNA from a variety of organisms using the nuclei method for advanced genomics research.

Authors:  Meiping Zhang; Yang Zhang; Chantel F Scheuring; Cheng-Cang Wu; Jennifer J Dong; Hong-Bin Zhang
Journal:  Nat Protoc       Date:  2012-02-16       Impact factor: 13.491

5.  Construction of BIBAC and BAC libraries from a variety of organisms for advanced genomics research.

Authors:  Hong-Bin Zhang; Chantel F Scheuring; Meiping Zhang; Yang Zhang; Cheng-Cang Wu; Jennifer J Dong; Yaning Li
Journal:  Nat Protoc       Date:  2012-02-16       Impact factor: 13.491

Review 6.  After the primary endosymbiosis: an update on the chromalveolate hypothesis and the origins of algae with Chl c.

Authors:  Beverley R Green
Journal:  Photosynth Res       Date:  2010-07-30       Impact factor: 3.573

7.  Plant killers on the spot.

Authors:  Arnab Pain; Christiane Hertz-Fowler
Journal:  Nat Rev Microbiol       Date:  2010-09       Impact factor: 60.633

8.  A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids.

Authors:  Jan Janouskovec; Ales Horák; Miroslav Oborník; Julius Lukes; Patrick J Keeling
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

9.  Transcription profiling and identification of infection-related genes in Phytophthora cactorum.

Authors:  Xiao-Ren Chen; Shen-Xin Huang; Ye Zhang; Gui-Lin Sheng; Bo-Yue Zhang; Qi-Yuan Li; Feng Zhu; Jing-You Xu
Journal:  Mol Genet Genomics       Date:  2017-12-07       Impact factor: 3.291

Review 10.  Pathogen virulence of Phytophthora infestans: from gene to functional genomics.

Authors:  Suman Sanju; Aditi Thakur; Sundresha Siddappa; Rohini Sreevathsa; Nidhi Srivastava; Pradeep Shukla; B P Singh
Journal:  Physiol Mol Biol Plants       Date:  2013-04
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