Literature DB >> 22412707

(3Z,3'Z)-3,3'-(3,5-Dimethyl-furan-2,4-diyl)bis-(4-hy-droxy-pent-3-en-2-one).

Mansour S Al-Said, Mostafa M Ghorab, Suchada Chantrapromma, Hoong-Kun Fun.   

Abstract

In the title mol-ecule, C(16)H(20)O(5), the two 4-hy-droxy-pent-3-en-2-one units are essentially planar, with r.m.s. deviations of 0.0183 (2) and 0.0134 (2) Å for the non-H atoms, and make dihedral angles of 81.20 (10) and 84.44 (10)° with the central furan ring. The dihedral angle between these two side units is 22.06 (9)°. Two intra-molecular O-H⋯O hydrogen bonds generate two S(6) ring motifs. A weak inter-molecular C-H⋯O inter-action is also observed.

Entities:  

Year:  2012        PMID: 22412707      PMCID: PMC3297904          DOI: 10.1107/S1600536812007696

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For applications of heterocyclic compounds, see: Abdel-Hamid et al. (2011 ▶); Alqasoumi et al. (2010 ▶); Al-Said et al. (2010 ▶, 2011 ▶); Ghorab et al. (2001 ▶); Ghorab, Al-Said & El-Hossary (2011 ▶); Ghorab, Ragab et al. (2011 ▶, 2012 ▶).

Experimental

Crystal data

C16H20O5 M = 292.32 Triclinic, a = 7.2645 (2) Å b = 8.5771 (2) Å c = 13.0931 (5) Å α = 88.384 (2)° β = 76.390 (2)° γ = 87.814 (1)° V = 792.17 (4) Å3 Z = 2 Cu Kα radiation μ = 0.75 mm−1 T = 296 K 0.59 × 0.55 × 0.19 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.665, T max = 0.868 6643 measured reflections 2597 independent reflections 2344 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.170 S = 1.04 2597 reflections 196 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812007696/is5075sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007696/is5075Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812007696/is5075Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H20O5Z = 2
Mr = 292.32F(000) = 312
Triclinic, P1Dx = 1.226 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 7.2645 (2) ÅCell parameters from 2597 reflections
b = 8.5771 (2) Åθ = 5.2–65.0°
c = 13.0931 (5) ŵ = 0.75 mm1
α = 88.384 (2)°T = 296 K
β = 76.390 (2)°Block, colorless
γ = 87.814 (1)°0.59 × 0.55 × 0.19 mm
V = 792.17 (4) Å3
Bruker SMART APEXII CCD area-detector diffractometer2597 independent reflections
Radiation source: fine-focus sealed tube2344 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.023
φ and ω scansθmax = 65.0°, θmin = 5.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −8→7
Tmin = 0.665, Tmax = 0.868k = −10→10
6643 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.104P)2 + 0.160P] where P = (Fo2 + 2Fc2)/3
2597 reflections(Δ/σ)max = 0.001
196 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.02411 (17)0.56371 (13)0.31031 (9)0.0579 (4)
O20.2498 (3)0.88634 (18)0.05070 (13)0.0854 (5)
O30.5019 (2)0.8614 (2)0.14714 (14)0.0912 (5)
H3A0.43990.89660.10640.137*
O40.1552 (3)−0.08978 (17)0.39756 (13)0.0854 (5)
O5−0.0968 (2)−0.09275 (16)0.29980 (13)0.0825 (5)
H5A−0.0240−0.12620.33510.124*
C10.1759 (3)0.5388 (2)0.22504 (14)0.0547 (4)
C20.2125 (2)0.38426 (19)0.21246 (13)0.0538 (4)
C30.0787 (2)0.30746 (19)0.29583 (13)0.0508 (4)
C4−0.0310 (3)0.4202 (2)0.35119 (14)0.0538 (4)
C50.2626 (3)0.6793 (2)0.16975 (14)0.0583 (5)
C60.1785 (3)0.7605 (2)0.09731 (15)0.0663 (5)
C70.0029 (4)0.7092 (3)0.0709 (2)0.0870 (7)
H7A−0.08770.79500.07820.131*
H7B−0.04910.62540.11770.131*
H7C0.03180.6739−0.00020.131*
C80.4249 (3)0.7383 (2)0.19331 (17)0.0690 (5)
C90.5166 (3)0.6632 (3)0.2732 (2)0.0892 (7)
H9A0.60960.73090.28720.134*
H9B0.57700.56610.24700.134*
H9C0.42240.64420.33680.134*
C100.3607 (3)0.3067 (3)0.12838 (17)0.0742 (6)
H10A0.42330.38430.07950.111*
H10B0.30210.23460.09210.111*
H10C0.45180.25160.15960.111*
C110.0602 (3)0.13679 (19)0.31678 (13)0.0547 (4)
C120.1725 (3)0.0557 (2)0.37746 (15)0.0659 (5)
C130.3133 (4)0.1371 (3)0.4210 (2)0.0940 (8)
H13A0.39390.06130.44600.141*
H13B0.24820.20120.47800.141*
H13C0.38870.20120.36690.141*
C14−0.0705 (3)0.0548 (2)0.27961 (15)0.0632 (5)
C15−0.1914 (4)0.1271 (3)0.2129 (2)0.0890 (7)
H15A−0.29620.06160.21400.134*
H15B−0.11790.13860.14200.134*
H15C−0.23830.22770.23950.134*
C16−0.1966 (3)0.4172 (2)0.44325 (16)0.0697 (6)
H16A−0.21660.31170.46880.105*
H16B−0.30750.45770.42240.105*
H16C−0.17240.48010.49790.105*
U11U22U33U12U13U23
O10.0659 (8)0.0415 (6)0.0592 (7)−0.0044 (5)−0.0001 (6)0.0031 (5)
O20.1097 (12)0.0637 (9)0.0794 (10)−0.0191 (8)−0.0158 (9)0.0265 (7)
O30.0894 (11)0.0805 (11)0.1025 (12)−0.0404 (9)−0.0176 (9)0.0250 (9)
O40.1135 (13)0.0554 (9)0.0822 (10)0.0142 (8)−0.0179 (9)0.0180 (7)
O50.1042 (12)0.0466 (8)0.0954 (11)−0.0176 (7)−0.0198 (9)0.0084 (7)
C10.0564 (10)0.0486 (9)0.0544 (9)−0.0075 (7)−0.0030 (7)0.0045 (7)
C20.0551 (9)0.0474 (9)0.0555 (9)−0.0046 (7)−0.0065 (7)0.0054 (7)
C30.0552 (9)0.0426 (9)0.0536 (9)−0.0053 (7)−0.0105 (7)0.0059 (7)
C40.0601 (10)0.0446 (9)0.0537 (9)−0.0077 (7)−0.0071 (7)0.0064 (7)
C50.0633 (11)0.0469 (9)0.0587 (10)−0.0095 (8)−0.0013 (8)0.0044 (7)
C60.0791 (13)0.0561 (11)0.0582 (11)−0.0090 (9)−0.0047 (9)0.0049 (8)
C70.0965 (17)0.0908 (17)0.0779 (14)−0.0173 (13)−0.0279 (12)0.0123 (12)
C80.0658 (12)0.0605 (11)0.0736 (12)−0.0148 (9)−0.0010 (9)0.0074 (9)
C90.0727 (14)0.0967 (18)0.0993 (17)−0.0199 (13)−0.0222 (12)0.0210 (14)
C100.0751 (13)0.0631 (12)0.0720 (13)0.0052 (10)0.0058 (10)0.0032 (9)
C110.0643 (10)0.0420 (9)0.0531 (9)−0.0006 (7)−0.0054 (7)0.0060 (7)
C120.0771 (12)0.0568 (11)0.0590 (11)0.0070 (9)−0.0090 (9)0.0088 (8)
C130.0952 (17)0.0977 (18)0.0954 (18)−0.0016 (14)−0.0378 (14)0.0198 (14)
C140.0750 (12)0.0458 (10)0.0640 (11)−0.0068 (8)−0.0064 (9)0.0040 (8)
C150.0996 (18)0.0742 (15)0.1048 (18)−0.0193 (13)−0.0461 (15)0.0119 (13)
C160.0741 (13)0.0586 (11)0.0650 (11)−0.0026 (9)0.0056 (9)0.0070 (9)
O1—C41.364 (2)C8—C91.486 (3)
O1—C11.387 (2)C9—H9A0.9600
O2—C61.289 (2)C9—H9B0.9600
O3—C81.281 (2)C9—H9C0.9600
O3—H3A0.8200C10—H10A0.9600
O4—C121.272 (2)C10—H10B0.9600
O5—C141.297 (2)C10—H10C0.9600
O5—H5A0.8200C11—C141.386 (3)
C1—C21.349 (2)C11—C121.418 (3)
C1—C51.472 (2)C12—C131.486 (3)
C2—C31.442 (2)C13—H13A0.9600
C2—C101.497 (2)C13—H13B0.9600
C3—C41.344 (2)C13—H13C0.9600
C3—C111.487 (2)C14—C151.486 (3)
C4—C161.490 (2)C15—H15A0.9600
C5—C61.401 (3)C15—H15B0.9600
C5—C81.403 (3)C15—H15C0.9600
C6—C71.483 (3)C16—H16A0.9600
C7—H7A0.9600C16—H16B0.9600
C7—H7B0.9600C16—H16C0.9600
C7—H7C0.9600
C4—O1—C1106.75 (13)H9B—C9—H9C109.5
C8—O3—H3A109.5C2—C10—H10A109.5
C14—O5—H5A109.5C2—C10—H10B109.5
C2—C1—O1109.76 (15)H10A—C10—H10B109.5
C2—C1—C5133.94 (17)C2—C10—H10C109.5
O1—C1—C5116.29 (15)H10A—C10—H10C109.5
C1—C2—C3106.28 (15)H10B—C10—H10C109.5
C1—C2—C10127.22 (17)C14—C11—C12118.74 (17)
C3—C2—C10126.50 (16)C14—C11—C3120.62 (16)
C4—C3—C2106.76 (15)C12—C11—C3120.62 (17)
C4—C3—C11125.75 (16)O4—C12—C11121.2 (2)
C2—C3—C11127.48 (15)O4—C12—C13117.37 (19)
C3—C4—O1110.43 (15)C11—C12—C13121.47 (19)
C3—C4—C16132.98 (16)C12—C13—H13A109.5
O1—C4—C16116.57 (15)C12—C13—H13B109.5
C6—C5—C8119.11 (17)H13A—C13—H13B109.5
C6—C5—C1120.53 (17)C12—C13—H13C109.5
C8—C5—C1120.27 (17)H13A—C13—H13C109.5
O2—C6—C5121.16 (19)H13B—C13—H13C109.5
O2—C6—C7116.34 (19)O5—C14—C11122.60 (19)
C5—C6—C7122.50 (18)O5—C14—C15114.18 (19)
C6—C7—H7A109.5C11—C14—C15123.22 (17)
C6—C7—H7B109.5C14—C15—H15A109.5
H7A—C7—H7B109.5C14—C15—H15B109.5
C6—C7—H7C109.5H15A—C15—H15B109.5
H7A—C7—H7C109.5C14—C15—H15C109.5
H7B—C7—H7C109.5H15A—C15—H15C109.5
O3—C8—C5121.5 (2)H15B—C15—H15C109.5
O3—C8—C9116.2 (2)C4—C16—H16A109.5
C5—C8—C9122.28 (18)C4—C16—H16B109.5
C8—C9—H9A109.5H16A—C16—H16B109.5
C8—C9—H9B109.5C4—C16—H16C109.5
H9A—C9—H9B109.5H16A—C16—H16C109.5
C8—C9—H9C109.5H16B—C16—H16C109.5
H9A—C9—H9C109.5
C4—O1—C1—C20.7 (2)C8—C5—C6—O21.4 (3)
C4—O1—C1—C5−178.48 (15)C1—C5—C6—O2177.88 (17)
O1—C1—C2—C3−1.2 (2)C8—C5—C6—C7−177.8 (2)
C5—C1—C2—C3177.8 (2)C1—C5—C6—C7−1.2 (3)
O1—C1—C2—C10178.20 (18)C6—C5—C8—O3−2.7 (3)
C5—C1—C2—C10−2.8 (4)C1—C5—C8—O3−179.23 (18)
C1—C2—C3—C41.2 (2)C6—C5—C8—C9176.9 (2)
C10—C2—C3—C4−178.19 (19)C1—C5—C8—C90.4 (3)
C1—C2—C3—C11−179.96 (17)C4—C3—C11—C1482.7 (2)
C10—C2—C3—C110.6 (3)C2—C3—C11—C14−95.9 (2)
C2—C3—C4—O1−0.8 (2)C4—C3—C11—C12−95.7 (2)
C11—C3—C4—O1−179.63 (15)C2—C3—C11—C1285.7 (2)
C2—C3—C4—C16177.7 (2)C14—C11—C12—O40.2 (3)
C11—C3—C4—C16−1.1 (3)C3—C11—C12—O4178.64 (17)
C1—O1—C4—C30.1 (2)C14—C11—C12—C13−179.13 (19)
C1—O1—C4—C16−178.72 (17)C3—C11—C12—C13−0.7 (3)
C2—C1—C5—C6101.3 (3)C12—C11—C14—O51.4 (3)
O1—C1—C5—C6−79.7 (2)C3—C11—C14—O5−177.04 (17)
C2—C1—C5—C8−82.2 (3)C12—C11—C14—C15−178.23 (19)
O1—C1—C5—C896.8 (2)C3—C11—C14—C153.4 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O20.821.712.457 (3)150
O5—H5A···O40.821.732.470 (3)148
C15—H15A···O3i0.962.603.507 (3)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O20.821.712.457 (3)150
O5—H5A⋯O40.821.732.470 (3)148
C15—H15A⋯O3i0.962.603.507 (3)158

Symmetry code: (i) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Cytotoxic potency and induced biochemical parameters in mice serum of new furan derivatives against liver cancer cell line.

Authors:  Hala F Abdel-Hamid; Abdelmohsen Soliman; Fahima M Helaly; Shadia Ragab
Journal:  Acta Pol Pharm       Date:  2011 Jul-Aug       Impact factor: 0.330

3.  Synthesis of novel quinolines, pyranoquinolines, furoquinolines, thieno-quinoline and their effect on the ultrastructure of some pathogenic microorganisms.

Authors:  M M Ghorab; S G Abdel-Hamide; H A Farrag
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Authors:  Mansour S Al-Said; Mostafa M Ghorab; Mohammed S Al-Dosari; Mostafa M Hamed
Journal:  Eur J Med Chem       Date:  2010-11-10       Impact factor: 6.514

5.  Synthesis, in-vitro anticancer screening and radiosensitizing evaluation of some new N-(quinoxalin-2-yl)benzenesulfonamide derivatives.

Authors:  M M Ghorab; F A Ragab; H I Heiba; M G El-Gazzar; M G El-Gazzar
Journal:  Arzneimittelforschung       Date:  2012-01-10

6.  Synthesis and in vitro anticancer screening of some novel 4-[2-amino-3-cyano-4-substituted-5,6,7,8-tetrahydroquinolin-1-(4H)-yl]benzenesulfonamides.

Authors:  Mansour S Al-Said; Mostafa M Ghorab; Saleh I Al-Qasoumi; Ebaa M El-Hossary; Eman Noaman
Journal:  Eur J Med Chem       Date:  2010-03-31       Impact factor: 6.514

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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