Literature DB >> 22412694

(3S,11Z)-14,16-Dihy-droxy-3-methyl-3,4,5,6,9,10-hexa-hydro-1H-2-benz-oxacyclo-tetra-decine-1,7(8H)-dione (cis-zearalenone): a redetermination.

Robert Köppen1, Juliane Riedel, Franziska Emmerling, Matthias Koch.   

Abstract

The title compound, also known as cis-zearalenone (cis-ZEN), C(18)H(22)O(5), has already been reported elsewhere [Griffin et al. (1981 ▶). ACA Ser.29, 35], but no atomic coordinates are publicly available. The mol-ecule is of inter-est with respect to its toxicity. In the crystal, intra-molecular O-H⋯O hydrogen bonds stabilize the mol-ecular conformation, while inter-molecular O-H⋯O hydrogen bonds link the mol-ecules to form infinite chains along the [110] and [1-10] directions. The absolute configuration has been assigned by reference to an unchanging chiral centre in the synthetic procedure.

Entities:  

Year:  2012        PMID: 22412694      PMCID: PMC3297891          DOI: 10.1107/S1600536812002735

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of trans-zearalenone (trans-ZEN) and zearalenol, see: Gelo-Pujić et al. (1994 ▶) and Zhao et al. (2008 ▶). For more detailed information about trans-ZEN and its metabolites, see: Urry et al. (1966 ▶) and Zinedine et al. (2007 ▶).

Experimental

Crystal data

C18H22O5 M = 318.36 Monoclinic, a = 5.677 (3) Å b = 9.186 (4) Å c = 16.531 (7) Å β = 98.91 (3)° V = 851.7 (7) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.3 × 0.1 × 0.05 mm

Data collection

Bruker APEX CCD area-detector diffractometer Absorption correction: ψ scan (SHELXTL; Sheldrick, 2008 ▶) T min = 0.21, T max = 0.28 20096 measured reflections 1976 independent reflections 1014 reflections with I > 2σ(I) R int = 0.101

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.124 S = 0.87 1976 reflections 209 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.11 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Bruker, 2001 ▶) and ORTEPIII (Burnett & Johnson, 1996 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812002735/bg2443sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812002735/bg2443Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812002735/bg2443Isup3.mol Supplementary material file. DOI: 10.1107/S1600536812002735/bg2443Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H22O5F(000) = 340
Mr = 318.36Dx = 1.241 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 56 reflections
a = 5.677 (3) Åθ = 4–25°
b = 9.186 (4) ŵ = 0.09 mm1
c = 16.531 (7) ÅT = 296 K
β = 98.91 (3)°Plate, colourless
V = 851.7 (7) Å30.3 × 0.1 × 0.05 mm
Z = 2
Bruker APEX CCD area-detector diffractometer1976 independent reflections
Radiation source: fine-focus sealed tube1014 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.101
ω/2θ scansθmax = 27.0°, θmin = 1.3°
Absorption correction: ψ scan (SHELXTL; Sheldrick, 2008)h = −7→7
Tmin = 0.21, Tmax = 0.28k = −11→11
20096 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 0.87w = 1/[σ2(Fo2) + (0.0678P)2] where P = (Fo2 + 2Fc2)/3
1976 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 0.14 e Å3
1 restraintΔρmin = −0.11 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7716 (4)0.4105 (3)0.15608 (15)0.0636 (7)
O20.8395 (5)0.2441 (3)0.06309 (17)0.0829 (9)
O30.7827 (6)0.8046 (4)0.30820 (19)0.0888 (10)
O41.5275 (5)0.0183 (3)0.38175 (16)0.0758 (9)
H201.6166−0.03600.36130.114*
O51.1936 (6)0.0703 (4)0.10159 (17)0.0871 (9)
H221.08610.11280.07190.131*
C10.8686 (7)0.2863 (5)0.1351 (3)0.0606 (10)
C20.3806 (8)0.4346 (7)0.0708 (3)0.0937 (15)
H40.30690.43140.11920.141*
H20.39170.33770.04980.141*
H30.28630.49380.03010.141*
C30.6293 (7)0.4994 (5)0.0915 (2)0.0691 (12)
H10.70700.50210.04260.083*
C40.6229 (8)0.6532 (5)0.1284 (3)0.0783 (13)
H50.50460.70970.09300.094*
H60.56810.64450.18090.094*
C50.8534 (9)0.7391 (6)0.1412 (3)0.0888 (14)
H80.81480.84170.14340.107*
H70.93300.72450.09390.107*
C61.0269 (8)0.7005 (6)0.2177 (3)0.0814 (13)
H91.04580.59560.21890.098*
H101.18060.74190.21200.098*
C70.9691 (9)0.7467 (4)0.2989 (3)0.0684 (11)
C81.1633 (9)0.7214 (6)0.3731 (3)0.0950 (15)
H121.29200.66740.35470.114*
H111.22690.81540.39220.114*
C91.0909 (10)0.6422 (5)0.4445 (3)0.0876 (14)
H130.93590.67760.45330.105*
H141.20400.66490.49310.105*
C101.0780 (9)0.4767 (4)0.4340 (3)0.0770 (13)
H161.21740.44380.41190.092*
H151.08200.43180.48730.092*
C110.8601 (7)0.4273 (4)0.3791 (2)0.0613 (10)
H170.71850.46880.38970.074*
C120.8360 (7)0.3329 (4)0.3171 (2)0.0549 (10)
H180.68280.32300.28810.066*
C131.1930 (7)0.1716 (4)0.3452 (2)0.0578 (10)
H191.19280.18820.40070.069*
C141.3643 (7)0.0777 (4)0.3214 (2)0.0590 (10)
C151.3633 (7)0.0455 (4)0.2402 (3)0.0643 (11)
H211.4758−0.01790.22460.077*
C161.1909 (8)0.1094 (4)0.1815 (2)0.0648 (11)
C171.0217 (7)0.2105 (4)0.2032 (2)0.0535 (9)
C181.0224 (6)0.2411 (4)0.2881 (2)0.0516 (9)
U11U22U33U12U13U23
O10.0711 (17)0.0634 (17)0.0536 (15)0.0035 (16)0.0008 (12)0.0067 (14)
O20.097 (2)0.097 (2)0.0508 (17)0.0073 (19)−0.0019 (15)−0.0117 (16)
O30.093 (2)0.078 (2)0.097 (2)0.024 (2)0.0210 (19)0.0020 (18)
O40.0816 (19)0.0612 (18)0.0781 (19)0.0113 (15)−0.0079 (15)0.0037 (15)
O50.110 (2)0.088 (2)0.0641 (18)0.018 (2)0.0173 (16)−0.0149 (16)
C10.059 (2)0.064 (3)0.059 (3)−0.004 (2)0.009 (2)−0.002 (2)
C20.072 (3)0.110 (4)0.093 (3)−0.001 (3)−0.007 (2)0.004 (3)
C30.063 (3)0.082 (3)0.059 (2)0.002 (2)0.0022 (19)0.015 (2)
C40.077 (3)0.081 (3)0.076 (3)0.012 (3)0.012 (2)0.025 (3)
C50.101 (4)0.080 (3)0.089 (3)−0.001 (3)0.028 (3)0.014 (3)
C60.075 (3)0.065 (3)0.103 (4)−0.003 (2)0.009 (3)−0.004 (3)
C70.085 (3)0.045 (2)0.076 (3)−0.005 (2)0.015 (2)0.002 (2)
C80.084 (3)0.084 (3)0.109 (4)−0.013 (3)−0.009 (3)0.014 (3)
C90.130 (4)0.052 (2)0.074 (3)−0.001 (3)−0.005 (3)−0.006 (2)
C100.112 (4)0.049 (2)0.065 (3)−0.001 (2)−0.001 (2)−0.001 (2)
C110.079 (3)0.053 (2)0.053 (2)0.002 (2)0.0143 (19)0.002 (2)
C120.058 (2)0.054 (2)0.053 (2)−0.0043 (19)0.0102 (18)0.0073 (19)
C130.075 (3)0.047 (2)0.051 (2)−0.007 (2)0.009 (2)−0.0010 (18)
C140.072 (3)0.043 (2)0.061 (3)−0.009 (2)0.005 (2)−0.001 (2)
C150.069 (3)0.047 (2)0.077 (3)0.006 (2)0.011 (2)−0.003 (2)
C160.084 (3)0.055 (3)0.059 (3)−0.007 (2)0.021 (2)−0.011 (2)
C170.060 (2)0.049 (2)0.051 (2)−0.0067 (19)0.0063 (18)−0.0027 (17)
C180.060 (2)0.042 (2)0.054 (2)−0.0102 (19)0.0100 (18)0.0021 (18)
O1—C11.336 (5)C6—H100.9700
O1—C31.480 (4)C7—C81.535 (6)
O2—C11.238 (4)C8—C91.497 (7)
O3—C71.215 (5)C8—H120.9700
O4—C141.366 (4)C8—H110.9700
O4—H200.8200C9—C101.531 (6)
O5—C161.371 (4)C9—H130.9700
O5—H220.8200C9—H140.9700
C1—C171.485 (5)C10—C111.487 (6)
C2—C31.522 (6)C10—H160.9700
C2—H40.9600C10—H150.9700
C2—H20.9600C11—C121.334 (5)
C2—H30.9600C11—H170.9300
C3—C41.542 (6)C12—C181.488 (5)
C3—H10.9800C12—H180.9300
C4—C51.514 (6)C13—C181.398 (5)
C4—H50.9700C13—C141.401 (5)
C4—H60.9700C13—H190.9300
C5—C61.521 (6)C14—C151.373 (5)
C5—H80.9700C15—C161.397 (5)
C5—H70.9700C15—H210.9300
C6—C71.491 (6)C16—C171.422 (5)
C6—H90.9700C17—C181.432 (5)
C1—O1—C3119.0 (3)C7—C8—H12108.1
C14—O4—H20109.5C9—C8—H11108.1
C16—O5—H22109.5C7—C8—H11108.1
O2—C1—O1121.2 (4)H12—C8—H11107.3
O2—C1—C17123.9 (4)C8—C9—C10114.0 (4)
O1—C1—C17114.9 (3)C8—C9—H13108.7
C3—C2—H4109.5C10—C9—H13108.7
C3—C2—H2109.5C8—C9—H14108.7
H4—C2—H2109.5C10—C9—H14108.7
C3—C2—H3109.5H13—C9—H14107.6
H4—C2—H3109.5C11—C10—C9113.1 (4)
H2—C2—H3109.5C11—C10—H16109.0
O1—C3—C2109.3 (3)C9—C10—H16109.0
O1—C3—C4105.3 (3)C11—C10—H15109.0
C2—C3—C4111.7 (4)C9—C10—H15109.0
O1—C3—H1110.1H16—C10—H15107.8
C2—C3—H1110.1C12—C11—C10130.1 (4)
C4—C3—H1110.1C12—C11—H17115.0
C5—C4—C3117.4 (4)C10—C11—H17115.0
C5—C4—H5108.0C11—C12—C18128.5 (4)
C3—C4—H5108.0C11—C12—H18115.8
C5—C4—H6108.0C18—C12—H18115.8
C3—C4—H6108.0C18—C13—C14122.0 (3)
H5—C4—H6107.2C18—C13—H19119.0
C4—C5—C6115.4 (4)C14—C13—H19119.0
C4—C5—H8108.4O4—C14—C15121.8 (4)
C6—C5—H8108.4O4—C14—C13117.5 (3)
C4—C5—H7108.4C15—C14—C13120.6 (4)
C6—C5—H7108.4C14—C15—C16119.0 (4)
H8—C5—H7107.5C14—C15—H21120.5
C7—C6—C5118.6 (4)C16—C15—H21120.5
C7—C6—H9107.7O5—C16—C15116.7 (4)
C5—C6—H9107.7O5—C16—C17121.5 (4)
C7—C6—H10107.7C15—C16—C17121.8 (4)
C5—C6—H10107.7C16—C17—C18118.5 (3)
H9—C6—H10107.1C16—C17—C1117.0 (3)
O3—C7—C6123.8 (4)C18—C17—C1124.3 (3)
O3—C7—C8119.8 (4)C13—C18—C17118.0 (3)
C6—C7—C8116.4 (4)C13—C18—C12119.6 (3)
C9—C8—C7116.9 (4)C17—C18—C12122.2 (3)
C9—C8—H12108.1
C3—O1—C1—O2−0.7 (5)C13—C14—C15—C160.9 (6)
C3—O1—C1—C17175.9 (3)C14—C15—C16—O5−178.2 (3)
C1—O1—C3—C279.8 (4)C14—C15—C16—C172.2 (6)
C1—O1—C3—C4−160.1 (3)O5—C16—C17—C18177.2 (3)
O1—C3—C4—C569.7 (4)C15—C16—C17—C18−3.2 (6)
C2—C3—C4—C5−171.8 (4)O5—C16—C17—C1−7.7 (5)
C3—C4—C5—C6−80.4 (5)C15—C16—C17—C1171.9 (4)
C4—C5—C6—C7−72.6 (6)O2—C1—C17—C1617.5 (6)
C5—C6—C7—O35.5 (6)O1—C1—C17—C16−159.0 (3)
C5—C6—C7—C8−172.9 (4)O2—C1—C17—C18−167.7 (4)
O3—C7—C8—C953.2 (6)O1—C1—C17—C1815.8 (5)
C6—C7—C8—C9−128.3 (5)C14—C13—C18—C171.9 (5)
C7—C8—C9—C1080.1 (6)C14—C13—C18—C12176.4 (3)
C8—C9—C10—C11−77.0 (6)C16—C17—C18—C131.1 (5)
C9—C10—C11—C12132.8 (5)C1—C17—C18—C13−173.6 (3)
C10—C11—C12—C184.5 (7)C16—C17—C18—C12−173.3 (3)
C18—C13—C14—O4178.2 (3)C1—C17—C18—C1212.0 (5)
C18—C13—C14—C15−3.0 (6)C11—C12—C18—C1341.9 (6)
O4—C14—C15—C16179.7 (3)C11—C12—C18—C17−143.8 (4)
D—H···AD—HH···AD···AD—H···A
O5—H22···O20.821.842.569 (5)148
O4—H20···O3i0.822.012.824 (5)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H22⋯O20.821.842.569 (5)148
O4—H20⋯O3i0.822.012.824 (5)169

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Review on the toxicity, occurrence, metabolism, detoxification, regulations and intake of zearalenone: an oestrogenic mycotoxin.

Authors:  Abdellah Zinedine; Jose Miguel Soriano; Juan Carlos Moltó; Jordi Mañes
Journal:  Food Chem Toxicol       Date:  2006-08-30       Impact factor: 6.023

3.  (4S,8S,9R,12E)-8,9,16,18-Tetrahydroxy-4-methyl-3-oxabicyclo[12.4.0]octadeca-12,14,16,18-tetraen-2-one monohydrate.

Authors:  Ling-Ling Zhao; Yue Gai; Hisayoshi Kobayashi; Chang-Qi Hu; Hui-Ping Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-07
  3 in total
  2 in total

1.  UV-induced cis-trans isomerization of zearalenone in contaminated maize.

Authors:  Ulrike Brezina; Susanne Kersten; Hana Valenta; Peter Sperfeld; Juliane Riedel; Sven Dänicke
Journal:  Mycotoxin Res       Date:  2013-09-10       Impact factor: 3.833

2.  (3S,7R)-7,14,16-Trihy-droxy-3-methyl-3,4,5,6,7,8,9,10,11,12-deca-hydro-1H-2-benzoxacyclo-tetra-decin-1-one.

Authors:  Sarah Drzymala; Werner Kraus; Franziska Emmerling; Matthias Koch
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-06
  2 in total

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