| Literature DB >> 22412694 |
Robert Köppen1, Juliane Riedel, Franziska Emmerling, Matthias Koch.
Abstract
The title compound, also known as cis-zearalenone (cis-ZEN), C(18)H(22)O(5), has already been reported elsewhere [Griffin et al. (1981 ▶). ACA Ser.29, 35], but no atomic coordinates are publicly available. The mol-ecule is of inter-est with respect to its toxicity. In the crystal, intra-molecular O-H⋯O hydrogen bonds stabilize the mol-ecular conformation, while inter-molecular O-H⋯O hydrogen bonds link the mol-ecules to form infinite chains along the [110] and [1-10] directions. The absolute configuration has been assigned by reference to an unchanging chiral centre in the synthetic procedure.Entities:
Year: 2012 PMID: 22412694 PMCID: PMC3297891 DOI: 10.1107/S1600536812002735
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H22O5 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 56 reflections |
| θ = 4–25° | |
| µ = 0.09 mm−1 | |
| β = 98.91 (3)° | Plate, colourless |
| 0.3 × 0.1 × 0.05 mm | |
| Bruker APEX CCD area-detector diffractometer | 1976 independent reflections |
| Radiation source: fine-focus sealed tube | 1014 reflections with |
| Graphite monochromator | |
| ω/2θ scans | θmax = 27.0°, θmin = 1.3° |
| Absorption correction: ψ scan ( | |
| 20096 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1976 reflections | (Δ/σ)max < 0.001 |
| 209 parameters | Δρmax = 0.14 e Å−3 |
| 1 restraint | Δρmin = −0.11 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.7716 (4) | 0.4105 (3) | 0.15608 (15) | 0.0636 (7) | |
| O2 | 0.8395 (5) | 0.2441 (3) | 0.06309 (17) | 0.0829 (9) | |
| O3 | 0.7827 (6) | 0.8046 (4) | 0.30820 (19) | 0.0888 (10) | |
| O4 | 1.5275 (5) | 0.0183 (3) | 0.38175 (16) | 0.0758 (9) | |
| H20 | 1.6166 | −0.0360 | 0.3613 | 0.114* | |
| O5 | 1.1936 (6) | 0.0703 (4) | 0.10159 (17) | 0.0871 (9) | |
| H22 | 1.0861 | 0.1128 | 0.0719 | 0.131* | |
| C1 | 0.8686 (7) | 0.2863 (5) | 0.1351 (3) | 0.0606 (10) | |
| C2 | 0.3806 (8) | 0.4346 (7) | 0.0708 (3) | 0.0937 (15) | |
| H4 | 0.3069 | 0.4314 | 0.1192 | 0.141* | |
| H2 | 0.3917 | 0.3377 | 0.0498 | 0.141* | |
| H3 | 0.2863 | 0.4938 | 0.0301 | 0.141* | |
| C3 | 0.6293 (7) | 0.4994 (5) | 0.0915 (2) | 0.0691 (12) | |
| H1 | 0.7070 | 0.5021 | 0.0426 | 0.083* | |
| C4 | 0.6229 (8) | 0.6532 (5) | 0.1284 (3) | 0.0783 (13) | |
| H5 | 0.5046 | 0.7097 | 0.0930 | 0.094* | |
| H6 | 0.5681 | 0.6445 | 0.1809 | 0.094* | |
| C5 | 0.8534 (9) | 0.7391 (6) | 0.1412 (3) | 0.0888 (14) | |
| H8 | 0.8148 | 0.8417 | 0.1434 | 0.107* | |
| H7 | 0.9330 | 0.7245 | 0.0939 | 0.107* | |
| C6 | 1.0269 (8) | 0.7005 (6) | 0.2177 (3) | 0.0814 (13) | |
| H9 | 1.0458 | 0.5956 | 0.2189 | 0.098* | |
| H10 | 1.1806 | 0.7419 | 0.2120 | 0.098* | |
| C7 | 0.9691 (9) | 0.7467 (4) | 0.2989 (3) | 0.0684 (11) | |
| C8 | 1.1633 (9) | 0.7214 (6) | 0.3731 (3) | 0.0950 (15) | |
| H12 | 1.2920 | 0.6674 | 0.3547 | 0.114* | |
| H11 | 1.2269 | 0.8154 | 0.3922 | 0.114* | |
| C9 | 1.0909 (10) | 0.6422 (5) | 0.4445 (3) | 0.0876 (14) | |
| H13 | 0.9359 | 0.6776 | 0.4533 | 0.105* | |
| H14 | 1.2040 | 0.6649 | 0.4931 | 0.105* | |
| C10 | 1.0780 (9) | 0.4767 (4) | 0.4340 (3) | 0.0770 (13) | |
| H16 | 1.2174 | 0.4438 | 0.4119 | 0.092* | |
| H15 | 1.0820 | 0.4318 | 0.4873 | 0.092* | |
| C11 | 0.8601 (7) | 0.4273 (4) | 0.3791 (2) | 0.0613 (10) | |
| H17 | 0.7185 | 0.4688 | 0.3897 | 0.074* | |
| C12 | 0.8360 (7) | 0.3329 (4) | 0.3171 (2) | 0.0549 (10) | |
| H18 | 0.6828 | 0.3230 | 0.2881 | 0.066* | |
| C13 | 1.1930 (7) | 0.1716 (4) | 0.3452 (2) | 0.0578 (10) | |
| H19 | 1.1928 | 0.1882 | 0.4007 | 0.069* | |
| C14 | 1.3643 (7) | 0.0777 (4) | 0.3214 (2) | 0.0590 (10) | |
| C15 | 1.3633 (7) | 0.0455 (4) | 0.2402 (3) | 0.0643 (11) | |
| H21 | 1.4758 | −0.0179 | 0.2246 | 0.077* | |
| C16 | 1.1909 (8) | 0.1094 (4) | 0.1815 (2) | 0.0648 (11) | |
| C17 | 1.0217 (7) | 0.2105 (4) | 0.2032 (2) | 0.0535 (9) | |
| C18 | 1.0224 (6) | 0.2411 (4) | 0.2881 (2) | 0.0516 (9) |
| O1 | 0.0711 (17) | 0.0634 (17) | 0.0536 (15) | 0.0035 (16) | 0.0008 (12) | 0.0067 (14) |
| O2 | 0.097 (2) | 0.097 (2) | 0.0508 (17) | 0.0073 (19) | −0.0019 (15) | −0.0117 (16) |
| O3 | 0.093 (2) | 0.078 (2) | 0.097 (2) | 0.024 (2) | 0.0210 (19) | 0.0020 (18) |
| O4 | 0.0816 (19) | 0.0612 (18) | 0.0781 (19) | 0.0113 (15) | −0.0079 (15) | 0.0037 (15) |
| O5 | 0.110 (2) | 0.088 (2) | 0.0641 (18) | 0.018 (2) | 0.0173 (16) | −0.0149 (16) |
| C1 | 0.059 (2) | 0.064 (3) | 0.059 (3) | −0.004 (2) | 0.009 (2) | −0.002 (2) |
| C2 | 0.072 (3) | 0.110 (4) | 0.093 (3) | −0.001 (3) | −0.007 (2) | 0.004 (3) |
| C3 | 0.063 (3) | 0.082 (3) | 0.059 (2) | 0.002 (2) | 0.0022 (19) | 0.015 (2) |
| C4 | 0.077 (3) | 0.081 (3) | 0.076 (3) | 0.012 (3) | 0.012 (2) | 0.025 (3) |
| C5 | 0.101 (4) | 0.080 (3) | 0.089 (3) | −0.001 (3) | 0.028 (3) | 0.014 (3) |
| C6 | 0.075 (3) | 0.065 (3) | 0.103 (4) | −0.003 (2) | 0.009 (3) | −0.004 (3) |
| C7 | 0.085 (3) | 0.045 (2) | 0.076 (3) | −0.005 (2) | 0.015 (2) | 0.002 (2) |
| C8 | 0.084 (3) | 0.084 (3) | 0.109 (4) | −0.013 (3) | −0.009 (3) | 0.014 (3) |
| C9 | 0.130 (4) | 0.052 (2) | 0.074 (3) | −0.001 (3) | −0.005 (3) | −0.006 (2) |
| C10 | 0.112 (4) | 0.049 (2) | 0.065 (3) | −0.001 (2) | −0.001 (2) | −0.001 (2) |
| C11 | 0.079 (3) | 0.053 (2) | 0.053 (2) | 0.002 (2) | 0.0143 (19) | 0.002 (2) |
| C12 | 0.058 (2) | 0.054 (2) | 0.053 (2) | −0.0043 (19) | 0.0102 (18) | 0.0073 (19) |
| C13 | 0.075 (3) | 0.047 (2) | 0.051 (2) | −0.007 (2) | 0.009 (2) | −0.0010 (18) |
| C14 | 0.072 (3) | 0.043 (2) | 0.061 (3) | −0.009 (2) | 0.005 (2) | −0.001 (2) |
| C15 | 0.069 (3) | 0.047 (2) | 0.077 (3) | 0.006 (2) | 0.011 (2) | −0.003 (2) |
| C16 | 0.084 (3) | 0.055 (3) | 0.059 (3) | −0.007 (2) | 0.021 (2) | −0.011 (2) |
| C17 | 0.060 (2) | 0.049 (2) | 0.051 (2) | −0.0067 (19) | 0.0063 (18) | −0.0027 (17) |
| C18 | 0.060 (2) | 0.042 (2) | 0.054 (2) | −0.0102 (19) | 0.0100 (18) | 0.0021 (18) |
| O1—C1 | 1.336 (5) | C6—H10 | 0.9700 |
| O1—C3 | 1.480 (4) | C7—C8 | 1.535 (6) |
| O2—C1 | 1.238 (4) | C8—C9 | 1.497 (7) |
| O3—C7 | 1.215 (5) | C8—H12 | 0.9700 |
| O4—C14 | 1.366 (4) | C8—H11 | 0.9700 |
| O4—H20 | 0.8200 | C9—C10 | 1.531 (6) |
| O5—C16 | 1.371 (4) | C9—H13 | 0.9700 |
| O5—H22 | 0.8200 | C9—H14 | 0.9700 |
| C1—C17 | 1.485 (5) | C10—C11 | 1.487 (6) |
| C2—C3 | 1.522 (6) | C10—H16 | 0.9700 |
| C2—H4 | 0.9600 | C10—H15 | 0.9700 |
| C2—H2 | 0.9600 | C11—C12 | 1.334 (5) |
| C2—H3 | 0.9600 | C11—H17 | 0.9300 |
| C3—C4 | 1.542 (6) | C12—C18 | 1.488 (5) |
| C3—H1 | 0.9800 | C12—H18 | 0.9300 |
| C4—C5 | 1.514 (6) | C13—C18 | 1.398 (5) |
| C4—H5 | 0.9700 | C13—C14 | 1.401 (5) |
| C4—H6 | 0.9700 | C13—H19 | 0.9300 |
| C5—C6 | 1.521 (6) | C14—C15 | 1.373 (5) |
| C5—H8 | 0.9700 | C15—C16 | 1.397 (5) |
| C5—H7 | 0.9700 | C15—H21 | 0.9300 |
| C6—C7 | 1.491 (6) | C16—C17 | 1.422 (5) |
| C6—H9 | 0.9700 | C17—C18 | 1.432 (5) |
| C1—O1—C3 | 119.0 (3) | C7—C8—H12 | 108.1 |
| C14—O4—H20 | 109.5 | C9—C8—H11 | 108.1 |
| C16—O5—H22 | 109.5 | C7—C8—H11 | 108.1 |
| O2—C1—O1 | 121.2 (4) | H12—C8—H11 | 107.3 |
| O2—C1—C17 | 123.9 (4) | C8—C9—C10 | 114.0 (4) |
| O1—C1—C17 | 114.9 (3) | C8—C9—H13 | 108.7 |
| C3—C2—H4 | 109.5 | C10—C9—H13 | 108.7 |
| C3—C2—H2 | 109.5 | C8—C9—H14 | 108.7 |
| H4—C2—H2 | 109.5 | C10—C9—H14 | 108.7 |
| C3—C2—H3 | 109.5 | H13—C9—H14 | 107.6 |
| H4—C2—H3 | 109.5 | C11—C10—C9 | 113.1 (4) |
| H2—C2—H3 | 109.5 | C11—C10—H16 | 109.0 |
| O1—C3—C2 | 109.3 (3) | C9—C10—H16 | 109.0 |
| O1—C3—C4 | 105.3 (3) | C11—C10—H15 | 109.0 |
| C2—C3—C4 | 111.7 (4) | C9—C10—H15 | 109.0 |
| O1—C3—H1 | 110.1 | H16—C10—H15 | 107.8 |
| C2—C3—H1 | 110.1 | C12—C11—C10 | 130.1 (4) |
| C4—C3—H1 | 110.1 | C12—C11—H17 | 115.0 |
| C5—C4—C3 | 117.4 (4) | C10—C11—H17 | 115.0 |
| C5—C4—H5 | 108.0 | C11—C12—C18 | 128.5 (4) |
| C3—C4—H5 | 108.0 | C11—C12—H18 | 115.8 |
| C5—C4—H6 | 108.0 | C18—C12—H18 | 115.8 |
| C3—C4—H6 | 108.0 | C18—C13—C14 | 122.0 (3) |
| H5—C4—H6 | 107.2 | C18—C13—H19 | 119.0 |
| C4—C5—C6 | 115.4 (4) | C14—C13—H19 | 119.0 |
| C4—C5—H8 | 108.4 | O4—C14—C15 | 121.8 (4) |
| C6—C5—H8 | 108.4 | O4—C14—C13 | 117.5 (3) |
| C4—C5—H7 | 108.4 | C15—C14—C13 | 120.6 (4) |
| C6—C5—H7 | 108.4 | C14—C15—C16 | 119.0 (4) |
| H8—C5—H7 | 107.5 | C14—C15—H21 | 120.5 |
| C7—C6—C5 | 118.6 (4) | C16—C15—H21 | 120.5 |
| C7—C6—H9 | 107.7 | O5—C16—C15 | 116.7 (4) |
| C5—C6—H9 | 107.7 | O5—C16—C17 | 121.5 (4) |
| C7—C6—H10 | 107.7 | C15—C16—C17 | 121.8 (4) |
| C5—C6—H10 | 107.7 | C16—C17—C18 | 118.5 (3) |
| H9—C6—H10 | 107.1 | C16—C17—C1 | 117.0 (3) |
| O3—C7—C6 | 123.8 (4) | C18—C17—C1 | 124.3 (3) |
| O3—C7—C8 | 119.8 (4) | C13—C18—C17 | 118.0 (3) |
| C6—C7—C8 | 116.4 (4) | C13—C18—C12 | 119.6 (3) |
| C9—C8—C7 | 116.9 (4) | C17—C18—C12 | 122.2 (3) |
| C9—C8—H12 | 108.1 | ||
| C3—O1—C1—O2 | −0.7 (5) | C13—C14—C15—C16 | 0.9 (6) |
| C3—O1—C1—C17 | 175.9 (3) | C14—C15—C16—O5 | −178.2 (3) |
| C1—O1—C3—C2 | 79.8 (4) | C14—C15—C16—C17 | 2.2 (6) |
| C1—O1—C3—C4 | −160.1 (3) | O5—C16—C17—C18 | 177.2 (3) |
| O1—C3—C4—C5 | 69.7 (4) | C15—C16—C17—C18 | −3.2 (6) |
| C2—C3—C4—C5 | −171.8 (4) | O5—C16—C17—C1 | −7.7 (5) |
| C3—C4—C5—C6 | −80.4 (5) | C15—C16—C17—C1 | 171.9 (4) |
| C4—C5—C6—C7 | −72.6 (6) | O2—C1—C17—C16 | 17.5 (6) |
| C5—C6—C7—O3 | 5.5 (6) | O1—C1—C17—C16 | −159.0 (3) |
| C5—C6—C7—C8 | −172.9 (4) | O2—C1—C17—C18 | −167.7 (4) |
| O3—C7—C8—C9 | 53.2 (6) | O1—C1—C17—C18 | 15.8 (5) |
| C6—C7—C8—C9 | −128.3 (5) | C14—C13—C18—C17 | 1.9 (5) |
| C7—C8—C9—C10 | 80.1 (6) | C14—C13—C18—C12 | 176.4 (3) |
| C8—C9—C10—C11 | −77.0 (6) | C16—C17—C18—C13 | 1.1 (5) |
| C9—C10—C11—C12 | 132.8 (5) | C1—C17—C18—C13 | −173.6 (3) |
| C10—C11—C12—C18 | 4.5 (7) | C16—C17—C18—C12 | −173.3 (3) |
| C18—C13—C14—O4 | 178.2 (3) | C1—C17—C18—C12 | 12.0 (5) |
| C18—C13—C14—C15 | −3.0 (6) | C11—C12—C18—C13 | 41.9 (6) |
| O4—C14—C15—C16 | 179.7 (3) | C11—C12—C18—C17 | −143.8 (4) |
| H··· | ||||
| O5—H22···O2 | 0.82 | 1.84 | 2.569 (5) | 148 |
| O4—H20···O3i | 0.82 | 2.01 | 2.824 (5) | 169 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H22⋯O2 | 0.82 | 1.84 | 2.569 (5) | 148 |
| O4—H20⋯O3i | 0.82 | 2.01 | 2.824 (5) | 169 |
Symmetry code: (i) .