| Literature DB >> 21202724 |
Ling-Ling Zhao, Yue Gai, Hisayoshi Kobayashi, Chang-Qi Hu, Hui-Ping Zhang.
Abstract
The asymmetric unit of the title compound, C(18)H(24)O(6)·H(2)O, contains a 14-membered macrolide mol-ecule and a water mol-ecule. In the crystal structure, intra-molecular C-H⋯O and O-H⋯O hydrogen bonds help to stabilize the mol-ecular conformation, while inter-molecular O-H⋯O hydrogen bonds link the mol-ecules, forming an infinite network. The absolute configuration was assigned by comparison with related zearalenone compounds, but needs verification.Entities:
Year: 2008 PMID: 21202724 PMCID: PMC2961568 DOI: 10.1107/S1600536808010258
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H24O6·H2O | |
| Monoclinic, | Mo |
| Hall symbol: C 2y | Cell parameters from 687 reflections |
| θ = 2.3–26.4° | |
| µ = 0.10 mm−1 | |
| β = 118.441 (7)° | Prismatic, colorless |
| 0.20 × 0.15 × 0.05 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 2076 independent reflections |
| Radiation source: fine-focus sealed tube | 1804 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.0°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 4458 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2076 reflections | (Δ/σ)max < 0.001 |
| 239 parameters | Δρmax = 0.28 e Å−3 |
| 4 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.87040 (13) | 0.9829 (4) | 0.35095 (16) | 0.0406 (6) | |
| H1 | 0.9091 | 0.9490 | 0.4085 | 0.061* | |
| O2 | 0.57709 (13) | 1.0102 (4) | 0.17058 (17) | 0.0424 (6) | |
| H2 | 0.5857 | 1.0188 | 0.1179 | 0.064* | |
| O3 | 0.94597 (14) | 0.9208 (5) | 0.55690 (19) | 0.0555 (9) | |
| O4 | 0.88077 (12) | 0.9851 (4) | 0.65316 (15) | 0.0393 (6) | |
| O5 | 0.72723 (16) | 1.0005 (5) | 0.9735 (2) | 0.0633 (10) | |
| H5 | 0.7609 | 0.9364 | 1.0189 | 0.095* | |
| O6 | 0.66693 (14) | 1.3026 (3) | 0.84561 (17) | 0.0397 (6) | |
| H6 | 0.6404 | 1.3623 | 0.7923 | 0.060* | |
| C1 | 0.79948 (18) | 0.9669 (4) | 0.4619 (2) | 0.0303 (7) | |
| C2 | 0.79927 (18) | 0.9842 (4) | 0.3594 (2) | 0.0323 (6) | |
| C3 | 0.72615 (18) | 1.0056 (4) | 0.2630 (2) | 0.0325 (7) | |
| H3 | 0.7275 | 1.0229 | 0.1975 | 0.039* | |
| C4 | 0.65057 (18) | 1.0013 (4) | 0.2639 (2) | 0.0329 (7) | |
| C5 | 0.64859 (18) | 0.9820 (5) | 0.3630 (2) | 0.0339 (7) | |
| H5A | 0.5974 | 0.9807 | 0.3626 | 0.041* | |
| C6 | 0.72118 (18) | 0.9649 (4) | 0.4615 (2) | 0.0307 (6) | |
| C7 | 0.88176 (18) | 0.9540 (5) | 0.5598 (2) | 0.0348 (8) | |
| C8 | 0.95973 (17) | 0.9717 (5) | 0.7566 (2) | 0.0371 (8) | |
| H8 | 0.9929 | 0.8813 | 0.7501 | 0.044* | |
| C9 | 1.0079 (2) | 1.1292 (6) | 0.7784 (3) | 0.0518 (10) | |
| H9A | 0.9748 | 1.2192 | 0.7817 | 0.078* | |
| H9B | 1.0214 | 1.1488 | 0.7204 | 0.078* | |
| H9C | 1.0583 | 1.1207 | 0.8470 | 0.078* | |
| C10 | 0.9324 (2) | 0.9239 (5) | 0.8403 (3) | 0.0403 (8) | |
| H10A | 0.9817 | 0.9075 | 0.9107 | 0.048* | |
| H10B | 0.9031 | 0.8190 | 0.8186 | 0.048* | |
| C11 | 0.8761 (2) | 1.0503 (5) | 0.8547 (3) | 0.0390 (8) | |
| H11A | 0.8391 | 1.0999 | 0.7843 | 0.047* | |
| H11B | 0.9100 | 1.1376 | 0.9037 | 0.047* | |
| C12 | 0.8244 (2) | 0.9678 (5) | 0.9017 (3) | 0.0384 (8) | |
| H12A | 0.7921 | 0.8786 | 0.8531 | 0.046* | |
| H12B | 0.8621 | 0.9189 | 0.9721 | 0.046* | |
| C13 | 0.76515 (19) | 1.0832 (5) | 0.9174 (2) | 0.0372 (8) | |
| H13 | 0.7985 | 1.1746 | 0.9643 | 0.045* | |
| C14 | 0.69633 (19) | 1.1591 (4) | 0.8122 (2) | 0.0319 (7) | |
| H14 | 0.7218 | 1.1976 | 0.7680 | 0.038* | |
| C15 | 0.6218 (2) | 1.0502 (5) | 0.7392 (3) | 0.0402 (8) | |
| H15A | 0.6040 | 0.9934 | 0.7861 | 0.048* | |
| H15B | 0.5766 | 1.1225 | 0.6914 | 0.048* | |
| C16 | 0.6333 (2) | 0.9202 (5) | 0.6675 (3) | 0.0394 (8) | |
| H16A | 0.6779 | 0.8464 | 0.7150 | 0.047* | |
| H16B | 0.5826 | 0.8549 | 0.6320 | 0.047* | |
| C17 | 0.65289 (19) | 0.9846 (5) | 0.5803 (2) | 0.0365 (7) | |
| H17 | 0.6211 | 1.0723 | 0.5372 | 0.044* | |
| C18 | 0.71206 (18) | 0.9253 (4) | 0.5608 (2) | 0.0320 (7) | |
| H18 | 0.7509 | 0.8537 | 0.6124 | 0.038* | |
| O7 | 0.58905 (17) | 1.0465 (9) | −0.0084 (2) | 0.104 (2) | |
| H7X | 0.6347 (15) | 1.031 (7) | −0.011 (3) | 0.065 (14)* | |
| H7Y | 0.5433 (15) | 1.057 (9) | −0.067 (3) | 0.084 (17)* |
| O1 | 0.0283 (10) | 0.0658 (18) | 0.0285 (10) | 0.0009 (12) | 0.0143 (9) | −0.0025 (13) |
| O2 | 0.0303 (10) | 0.0656 (19) | 0.0266 (10) | 0.0022 (12) | 0.0099 (9) | 0.0024 (12) |
| O3 | 0.0308 (11) | 0.105 (3) | 0.0311 (11) | 0.0088 (14) | 0.0150 (10) | −0.0045 (14) |
| O4 | 0.0271 (9) | 0.0652 (16) | 0.0222 (10) | 0.0050 (12) | 0.0088 (8) | −0.0037 (12) |
| O5 | 0.0505 (15) | 0.096 (3) | 0.0577 (16) | 0.0275 (17) | 0.0372 (14) | 0.0453 (18) |
| O6 | 0.0403 (13) | 0.0473 (14) | 0.0316 (11) | 0.0104 (11) | 0.0172 (11) | 0.0001 (11) |
| C1 | 0.0296 (13) | 0.0349 (18) | 0.0239 (12) | 0.0002 (13) | 0.0108 (11) | −0.0028 (13) |
| C2 | 0.0337 (14) | 0.0363 (17) | 0.0280 (13) | −0.0036 (15) | 0.0156 (12) | −0.0052 (15) |
| C3 | 0.0355 (15) | 0.0392 (18) | 0.0258 (12) | 0.0005 (14) | 0.0170 (12) | −0.0004 (13) |
| C4 | 0.0308 (14) | 0.0371 (18) | 0.0265 (13) | 0.0024 (14) | 0.0102 (12) | −0.0022 (13) |
| C5 | 0.0271 (13) | 0.0457 (18) | 0.0303 (14) | 0.0007 (14) | 0.0147 (12) | −0.0017 (15) |
| C6 | 0.0328 (14) | 0.0345 (17) | 0.0261 (13) | 0.0015 (13) | 0.0150 (12) | −0.0022 (12) |
| C7 | 0.0297 (14) | 0.048 (2) | 0.0275 (14) | 0.0016 (14) | 0.0139 (12) | −0.0025 (14) |
| C8 | 0.0240 (13) | 0.057 (2) | 0.0248 (13) | 0.0109 (15) | 0.0072 (12) | 0.0000 (15) |
| C9 | 0.0408 (19) | 0.071 (3) | 0.047 (2) | −0.0069 (19) | 0.0238 (18) | −0.013 (2) |
| C10 | 0.0356 (16) | 0.053 (2) | 0.0302 (15) | 0.0129 (16) | 0.0139 (13) | 0.0081 (15) |
| C11 | 0.0377 (16) | 0.045 (2) | 0.0397 (16) | 0.0036 (15) | 0.0230 (15) | 0.0020 (15) |
| C12 | 0.0326 (14) | 0.045 (2) | 0.0354 (15) | 0.0080 (15) | 0.0141 (13) | 0.0100 (15) |
| C13 | 0.0317 (15) | 0.054 (2) | 0.0304 (15) | 0.0018 (15) | 0.0182 (14) | 0.0059 (14) |
| C14 | 0.0310 (14) | 0.0415 (18) | 0.0287 (14) | 0.0015 (13) | 0.0187 (13) | 0.0002 (13) |
| C15 | 0.0379 (16) | 0.053 (2) | 0.0370 (16) | −0.0036 (16) | 0.0234 (15) | −0.0040 (16) |
| C16 | 0.0408 (17) | 0.0452 (19) | 0.0349 (16) | −0.0130 (16) | 0.0202 (15) | −0.0087 (15) |
| C17 | 0.0375 (15) | 0.0431 (18) | 0.0295 (14) | −0.0029 (15) | 0.0165 (13) | −0.0035 (15) |
| C18 | 0.0291 (14) | 0.0382 (17) | 0.0247 (14) | −0.0044 (13) | 0.0096 (12) | −0.0011 (12) |
| O7 | 0.0298 (13) | 0.252 (6) | 0.0303 (13) | 0.005 (3) | 0.0133 (12) | 0.005 (3) |
| O1—C2 | 1.356 (4) | C9—H9C | 0.9599 |
| O1—H1 | 0.8200 | C10—C11 | 1.526 (5) |
| O2—C4 | 1.349 (4) | C10—H10A | 0.9700 |
| O2—H2 | 0.8200 | C10—H10B | 0.9700 |
| O3—C7 | 1.220 (4) | C11—C12 | 1.532 (5) |
| O4—C7 | 1.327 (4) | C11—H11A | 0.9700 |
| O4—C8 | 1.474 (3) | C11—H11B | 0.9700 |
| O5—C13 | 1.429 (4) | C12—C13 | 1.518 (5) |
| O5—H5 | 0.8200 | C12—H12A | 0.9700 |
| O6—C14 | 1.443 (4) | C12—H12B | 0.9700 |
| O6—H6 | 0.8200 | C13—C14 | 1.527 (4) |
| C1—C6 | 1.424 (4) | C13—H13 | 0.9800 |
| C1—C2 | 1.426 (4) | C14—C15 | 1.528 (5) |
| C1—C7 | 1.470 (4) | C14—H14 | 0.9800 |
| C2—C3 | 1.377 (4) | C15—C16 | 1.526 (5) |
| C3—C4 | 1.384 (4) | C15—H15A | 0.9700 |
| C3—H3 | 0.9300 | C15—H15B | 0.9700 |
| C4—C5 | 1.400 (4) | C16—C17 | 1.507 (4) |
| C5—C6 | 1.383 (4) | C16—H16A | 0.9700 |
| C5—H5A | 0.9300 | C16—H16B | 0.9700 |
| C6—C18 | 1.497 (4) | C17—C18 | 1.321 (5) |
| C8—C9 | 1.492 (6) | C17—H17 | 0.9300 |
| C8—C10 | 1.514 (5) | C18—H18 | 0.9300 |
| C8—H8 | 0.9800 | O7—H7X | 0.857 (18) |
| C9—H9A | 0.9599 | O7—H7Y | 0.844 (18) |
| C9—H9B | 0.9599 | ||
| C2—O1—H1 | 109.5 | C10—C11—C12 | 110.7 (3) |
| C4—O2—H2 | 109.5 | C10—C11—H11A | 109.5 |
| C7—O4—C8 | 118.3 (2) | C12—C11—H11A | 109.5 |
| C13—O5—H5 | 109.5 | C10—C11—H11B | 109.5 |
| C14—O6—H6 | 109.5 | C12—C11—H11B | 109.5 |
| C6—C1—C2 | 118.0 (3) | H11A—C11—H11B | 108.1 |
| C6—C1—C7 | 125.7 (3) | C13—C12—C11 | 114.7 (3) |
| C2—C1—C7 | 116.3 (3) | C13—C12—H12A | 108.6 |
| O1—C2—C3 | 116.2 (2) | C11—C12—H12A | 108.6 |
| O1—C2—C1 | 122.4 (3) | C13—C12—H12B | 108.6 |
| C3—C2—C1 | 121.4 (3) | C11—C12—H12B | 108.6 |
| C2—C3—C4 | 119.8 (3) | H12A—C12—H12B | 107.6 |
| C2—C3—H3 | 120.1 | O5—C13—C12 | 110.6 (3) |
| C4—C3—H3 | 120.1 | O5—C13—C14 | 108.5 (2) |
| O2—C4—C3 | 121.9 (3) | C12—C13—C14 | 115.3 (3) |
| O2—C4—C5 | 117.9 (3) | O5—C13—H13 | 107.4 |
| C3—C4—C5 | 120.1 (3) | C12—C13—H13 | 107.4 |
| C6—C5—C4 | 121.3 (3) | C14—C13—H13 | 107.4 |
| C6—C5—H5A | 119.3 | O6—C14—C13 | 106.2 (2) |
| C4—C5—H5A | 119.3 | O6—C14—C15 | 109.1 (3) |
| C5—C6—C1 | 119.3 (3) | C13—C14—C15 | 117.9 (3) |
| C5—C6—C18 | 117.1 (3) | O6—C14—H14 | 107.8 |
| C1—C6—C18 | 123.2 (3) | C13—C14—H14 | 107.8 |
| O3—C7—O4 | 122.2 (3) | C15—C14—H14 | 107.8 |
| O3—C7—C1 | 124.0 (3) | C16—C15—C14 | 118.3 (3) |
| O4—C7—C1 | 113.9 (2) | C16—C15—H15A | 107.7 |
| O4—C8—C9 | 110.0 (3) | C14—C15—H15A | 107.7 |
| O4—C8—C10 | 103.8 (2) | C16—C15—H15B | 107.7 |
| C9—C8—C10 | 116.0 (3) | C14—C15—H15B | 107.7 |
| O4—C8—H8 | 108.9 | H15A—C15—H15B | 107.1 |
| C9—C8—H8 | 108.9 | C17—C16—C15 | 116.3 (3) |
| C10—C8—H8 | 108.9 | C17—C16—H16A | 108.2 |
| C8—C9—H9A | 109.5 | C15—C16—H16A | 108.2 |
| C8—C9—H9B | 109.5 | C17—C16—H16B | 108.2 |
| H9A—C9—H9B | 109.5 | C15—C16—H16B | 108.2 |
| C8—C9—H9C | 109.5 | H16A—C16—H16B | 107.4 |
| H9A—C9—H9C | 109.5 | C18—C17—C16 | 124.6 (3) |
| H9B—C9—H9C | 109.5 | C18—C17—H17 | 117.7 |
| C8—C10—C11 | 114.6 (3) | C16—C17—H17 | 117.7 |
| C8—C10—H10A | 108.6 | C17—C18—C6 | 124.7 (3) |
| C11—C10—H10A | 108.6 | C17—C18—H18 | 117.6 |
| C8—C10—H10B | 108.6 | C6—C18—H18 | 117.6 |
| C11—C10—H10B | 108.6 | H7X—O7—H7Y | 121 (3) |
| H10A—C10—H10B | 107.6 | ||
| C6—C1—C2—O1 | −178.2 (3) | C2—C1—C7—O4 | 161.9 (3) |
| C7—C1—C2—O1 | 2.4 (5) | C7—O4—C8—C9 | 84.2 (4) |
| C6—C1—C2—C3 | 2.7 (5) | C7—O4—C8—C10 | −151.0 (3) |
| C7—C1—C2—C3 | −176.7 (3) | O4—C8—C10—C11 | −61.1 (4) |
| O1—C2—C3—C4 | 177.3 (3) | C9—C8—C10—C11 | 59.7 (4) |
| C1—C2—C3—C4 | −3.6 (5) | C8—C10—C11—C12 | 157.2 (3) |
| C2—C3—C4—O2 | −175.3 (3) | C10—C11—C12—C13 | −179.1 (3) |
| C2—C3—C4—C5 | 2.6 (5) | C11—C12—C13—O5 | −173.0 (3) |
| O2—C4—C5—C6 | 177.2 (3) | C11—C12—C13—C14 | 63.5 (4) |
| C3—C4—C5—C6 | −0.8 (6) | O5—C13—C14—O6 | 74.9 (4) |
| C4—C5—C6—C1 | −0.1 (6) | C12—C13—C14—O6 | −160.5 (3) |
| C4—C5—C6—C18 | −173.1 (3) | O5—C13—C14—C15 | −47.6 (4) |
| C2—C1—C6—C5 | −0.9 (5) | C12—C13—C14—C15 | 77.0 (4) |
| C7—C1—C6—C5 | 178.5 (3) | O6—C14—C15—C16 | 162.4 (3) |
| C2—C1—C6—C18 | 171.7 (3) | C13—C14—C15—C16 | −76.5 (4) |
| C7—C1—C6—C18 | −8.9 (5) | C14—C15—C16—C17 | −63.5 (4) |
| C8—O4—C7—O3 | −2.6 (6) | C15—C16—C17—C18 | 133.7 (4) |
| C8—O4—C7—C1 | 178.6 (3) | C16—C17—C18—C6 | 167.4 (3) |
| C6—C1—C7—O3 | 163.7 (4) | C5—C6—C18—C17 | −37.0 (5) |
| C2—C1—C7—O3 | −16.9 (5) | C1—C6—C18—C17 | 150.3 (4) |
| C6—C1—C7—O4 | −17.5 (5) |
| H··· | ||||
| O1—H1···O3 | 0.82 | 1.85 | 2.560 (4) | 144. |
| O2—H2···O7 | 0.82 | 1.79 | 2.608 (4) | 172. |
| C3—H3···O7 | 0.93 | 2.77 | 3.398 (4) | 125. |
| C9—H9B···O3 | 0.96 | 2.73 | 3.198 (5) | 111. |
| O1—H1···O3i | 0.82 | 2.46 | 3.003 (4) | 125. |
| O7—H7Y···O2ii | 0.84 (2) | 2.01 (3) | 2.798 (4) | 156 (6) |
| O5—H5···O6iii | 0.82 | 2.02 | 2.821 (4) | 166. |
| O6—H6···O1iv | 0.82 | 2.13 | 2.871 (4) | 149. |
| C3—H3···O6v | 0.93 | 2.88 | 3.398 (4) | 116. |
| C10—H10B···O2v | 0.97 | 2.52 | 3.346 (6) | 144. |
| O7—H7X···O5vi | 0.86 (2) | 1.82 (2) | 2.674 (4) | 176 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O3 | 0.82 | 1.85 | 2.560 (4) | 144 |
| O2—H2⋯O7 | 0.82 | 1.79 | 2.608 (4) | 172 |
| C3—H3⋯O7 | 0.93 | 2.77 | 3.398 (4) | 125 |
| C9—H9 | 0.96 | 2.73 | 3.198 (5) | 111 |
| O1—H1⋯O3i | 0.82 | 2.46 | 3.003 (4) | 125 |
| O7—H7 | 0.844 (18) | 2.01 (3) | 2.798 (4) | 156 (6) |
| O5—H5⋯O6iii | 0.82 | 2.02 | 2.821 (4) | 166 |
| O6—H6⋯O1iv | 0.82 | 2.13 | 2.871 (4) | 149 |
| C3—H3⋯O6v | 0.93 | 2.88 | 3.398 (4) | 116 |
| C10—H10 | 0.97 | 2.52 | 3.346 (6) | 144 |
| O7—H7 | 0.857 (18) | 1.818 (19) | 2.674 (4) | 176 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .