| Literature DB >> 22412659 |
Gemma E Craig1, Carla Johnson, Alan R Kennedy.
Abstract
The reaction of 1,4-dimethyl-piperazine and 3-hy-droxy-2-naphthoic acid gives the title 1:1 salt, C(6)H(15)N(2) (+)·C(11)H(7)O(3) (-), with a singly protonated piperazinium cation. In the crystal, a single N-H⋯O hydrogen bond links the cations and anions into discrete pairs and the aromatic anions stack along the crystallographic a-axis direction. This results in layers of cations and anions alternating along the crystallographic c-axis direction. An intra-molecular O-H⋯O hydrogen bond is also present.Entities:
Year: 2012 PMID: 22412659 PMCID: PMC3297856 DOI: 10.1107/S1600536812005375
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H15N2+·C11H7O3− | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1466 reflections |
| θ = 2.5–31.3° | |
| µ = 0.09 mm−1 | |
| β = 100.29 (2)° | Fragment, colourless |
| 0.20 × 0.15 × 0.08 mm | |
| Oxford Diffraction Xcaliber S diffractometer | 1608 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 26.0°, θmin = 2.5° |
| Detector resolution: 16.0268 pixels mm-1 | |
| ω scans | |
| 7855 measured reflections | |
| 2996 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2996 reflections | Δρmax = 0.14 e Å−3 |
| 203 parameters | Δρmin = −0.16 e Å−3 |
| 1 restraint | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.046 (5) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.4807 (4) | 0.4173 (2) | 0.83756 (18) | 0.0698 (7) | |
| O2 | 0.7191 (4) | 0.2587 (2) | 0.86723 (18) | 0.0693 (7) | |
| O3 | 0.6220 (4) | 0.0581 (2) | 0.7662 (2) | 0.0713 (7) | |
| H3 | 0.6909 | 0.1050 | 0.8120 | 0.107* | |
| N1 | 0.0615 (5) | 0.2188 (2) | 0.18076 (18) | 0.0540 (7) | |
| N2 | 0.2028 (4) | 0.0436 (2) | 0.03575 (18) | 0.0485 (6) | |
| H2 | 0.3079 | 0.0004 | 0.0834 | 0.058* | |
| C1 | 0.5324 (6) | 0.3081 (3) | 0.8212 (2) | 0.0499 (8) | |
| C2 | 0.3691 (5) | 0.2334 (2) | 0.7444 (2) | 0.0421 (7) | |
| C3 | 0.4223 (5) | 0.1106 (3) | 0.7177 (2) | 0.0492 (8) | |
| C4 | 0.2712 (6) | 0.0446 (3) | 0.6450 (2) | 0.0577 (8) | |
| H4 | 0.3089 | −0.0353 | 0.6286 | 0.069* | |
| C5 | 0.0600 (6) | 0.0946 (3) | 0.5943 (2) | 0.0511 (8) | |
| C6 | 0.0011 (5) | 0.2159 (3) | 0.6212 (2) | 0.0481 (8) | |
| C7 | 0.1630 (5) | 0.2818 (2) | 0.6959 (2) | 0.0460 (7) | |
| H7 | 0.1275 | 0.3618 | 0.7128 | 0.055* | |
| C8 | −0.1018 (7) | 0.0297 (3) | 0.5177 (3) | 0.0691 (10) | |
| H8 | −0.0694 | −0.0504 | 0.4995 | 0.083* | |
| C9 | −0.3021 (7) | 0.0825 (4) | 0.4708 (3) | 0.0819 (12) | |
| H9 | −0.4035 | 0.0387 | 0.4192 | 0.098* | |
| C10 | −0.3613 (7) | 0.2015 (4) | 0.4978 (3) | 0.0815 (12) | |
| H10 | −0.5014 | 0.2359 | 0.4653 | 0.098* | |
| C11 | −0.2116 (6) | 0.2662 (3) | 0.5721 (3) | 0.0642 (9) | |
| H11 | −0.2509 | 0.3450 | 0.5907 | 0.077* | |
| C12 | 0.2864 (6) | 0.2257 (3) | 0.1499 (3) | 0.0621 (9) | |
| H12A | 0.3974 | 0.1803 | 0.2017 | 0.074* | |
| H12B | 0.3362 | 0.3107 | 0.1514 | 0.074* | |
| C13 | 0.2821 (6) | 0.1748 (3) | 0.0404 (3) | 0.0582 (9) | |
| H13A | 0.4357 | 0.1793 | 0.0224 | 0.070* | |
| H13B | 0.1784 | 0.2230 | −0.0123 | 0.070* | |
| C14 | −0.0210 (5) | 0.0334 (3) | 0.0721 (2) | 0.0559 (8) | |
| H14A | −0.0635 | −0.0524 | 0.0751 | 0.067* | |
| H14B | −0.1396 | 0.0745 | 0.0208 | 0.067* | |
| C15 | −0.0076 (6) | 0.0901 (3) | 0.1817 (2) | 0.0572 (9) | |
| H15A | −0.1573 | 0.0843 | 0.2036 | 0.069* | |
| H15B | 0.1034 | 0.0454 | 0.2339 | 0.069* | |
| C16 | 0.0568 (7) | 0.2757 (3) | 0.2852 (3) | 0.0778 (11) | |
| H16A | 0.1569 | 0.2313 | 0.3408 | 0.117* | |
| H16B | −0.0983 | 0.2742 | 0.2995 | 0.117* | |
| H16C | 0.1086 | 0.3592 | 0.2841 | 0.117* | |
| C17 | 0.1976 (6) | −0.0108 (3) | −0.0721 (2) | 0.0694 (10) | |
| H17A | 0.1472 | −0.0946 | −0.0717 | 0.104* | |
| H17B | 0.3498 | −0.0079 | −0.0898 | 0.104* | |
| H17C | 0.0926 | 0.0347 | −0.1249 | 0.104* |
| O1 | 0.0622 (15) | 0.0473 (14) | 0.0920 (16) | 0.0018 (12) | −0.0080 (11) | −0.0174 (12) |
| O2 | 0.0633 (17) | 0.0680 (15) | 0.0704 (14) | 0.0035 (13) | −0.0053 (12) | −0.0016 (12) |
| O3 | 0.0711 (16) | 0.0539 (14) | 0.0857 (16) | 0.0150 (13) | 0.0058 (12) | 0.0047 (12) |
| N1 | 0.0617 (18) | 0.0417 (15) | 0.0584 (15) | 0.0002 (14) | 0.0099 (12) | 0.0000 (12) |
| N2 | 0.0493 (15) | 0.0434 (14) | 0.0510 (14) | 0.0044 (12) | 0.0042 (10) | 0.0066 (12) |
| C1 | 0.049 (2) | 0.047 (2) | 0.0516 (18) | −0.0045 (16) | 0.0016 (15) | 0.0030 (15) |
| C2 | 0.0478 (18) | 0.0365 (15) | 0.0419 (15) | −0.0003 (14) | 0.0074 (13) | 0.0016 (13) |
| C3 | 0.055 (2) | 0.0392 (17) | 0.0534 (17) | 0.0029 (15) | 0.0085 (15) | 0.0040 (15) |
| C4 | 0.079 (2) | 0.0358 (16) | 0.062 (2) | 0.0007 (18) | 0.0225 (17) | −0.0012 (15) |
| C5 | 0.066 (2) | 0.0445 (19) | 0.0440 (16) | −0.0126 (16) | 0.0121 (15) | −0.0028 (14) |
| C6 | 0.0483 (19) | 0.0502 (19) | 0.0452 (15) | −0.0061 (15) | 0.0069 (14) | 0.0008 (15) |
| C7 | 0.057 (2) | 0.0347 (15) | 0.0462 (15) | 0.0011 (15) | 0.0089 (14) | −0.0039 (12) |
| C8 | 0.086 (3) | 0.062 (2) | 0.059 (2) | −0.021 (2) | 0.0122 (19) | −0.0126 (18) |
| C9 | 0.078 (3) | 0.101 (3) | 0.061 (2) | −0.034 (3) | −0.0001 (19) | −0.008 (2) |
| C10 | 0.068 (3) | 0.105 (3) | 0.065 (2) | −0.015 (2) | −0.0048 (19) | 0.013 (2) |
| C11 | 0.061 (2) | 0.065 (2) | 0.0631 (19) | 0.0012 (19) | 0.0015 (16) | 0.0026 (17) |
| C12 | 0.065 (2) | 0.0412 (18) | 0.078 (2) | −0.0092 (17) | 0.0058 (17) | 0.0020 (17) |
| C13 | 0.063 (2) | 0.0390 (17) | 0.074 (2) | −0.0047 (16) | 0.0165 (16) | 0.0120 (15) |
| C14 | 0.0497 (19) | 0.0503 (18) | 0.067 (2) | −0.0031 (15) | 0.0078 (15) | 0.0032 (16) |
| C15 | 0.064 (2) | 0.050 (2) | 0.0585 (19) | −0.0035 (16) | 0.0110 (16) | 0.0051 (15) |
| C16 | 0.098 (3) | 0.067 (2) | 0.067 (2) | 0.004 (2) | 0.0124 (19) | −0.0089 (18) |
| C17 | 0.082 (3) | 0.068 (2) | 0.058 (2) | 0.013 (2) | 0.0097 (17) | 0.0025 (18) |
| O1—C1 | 1.253 (4) | C8—H8 | 0.9300 |
| O2—C1 | 1.265 (4) | C9—C10 | 1.399 (6) |
| O3—C3 | 1.349 (4) | C9—H9 | 0.9300 |
| O3—H3 | 0.8200 | C10—C11 | 1.360 (5) |
| N1—C12 | 1.445 (4) | C10—H10 | 0.9300 |
| N1—C16 | 1.455 (4) | C11—H11 | 0.9300 |
| N1—C15 | 1.460 (4) | C12—C13 | 1.479 (5) |
| N2—C14 | 1.472 (4) | C12—H12A | 0.9700 |
| N2—C17 | 1.474 (4) | C12—H12B | 0.9700 |
| N2—C13 | 1.501 (4) | C13—H13A | 0.9700 |
| N2—H2 | 0.9100 | C13—H13B | 0.9700 |
| C1—C2 | 1.479 (4) | C14—C15 | 1.497 (4) |
| C2—C7 | 1.361 (4) | C14—H14A | 0.9700 |
| C2—C3 | 1.427 (4) | C14—H14B | 0.9700 |
| C3—C4 | 1.360 (4) | C15—H15A | 0.9700 |
| C4—C5 | 1.400 (4) | C15—H15B | 0.9700 |
| C4—H4 | 0.9300 | C16—H16A | 0.9600 |
| C5—C8 | 1.416 (4) | C16—H16B | 0.9600 |
| C5—C6 | 1.421 (4) | C16—H16C | 0.9600 |
| C6—C11 | 1.403 (4) | C17—H17A | 0.9600 |
| C6—C7 | 1.408 (4) | C17—H17B | 0.9600 |
| C7—H7 | 0.9300 | C17—H17C | 0.9600 |
| C8—C9 | 1.348 (5) | ||
| C3—O3—H3 | 109.5 | C10—C11—C6 | 121.1 (4) |
| C12—N1—C16 | 112.7 (3) | C10—C11—H11 | 119.5 |
| C12—N1—C15 | 108.7 (2) | C6—C11—H11 | 119.5 |
| C16—N1—C15 | 110.6 (3) | N1—C12—C13 | 111.5 (3) |
| C14—N2—C17 | 112.5 (2) | N1—C12—H12A | 109.3 |
| C14—N2—C13 | 110.4 (2) | C13—C12—H12A | 109.3 |
| C17—N2—C13 | 111.9 (2) | N1—C12—H12B | 109.3 |
| C14—N2—H2 | 107.2 | C13—C12—H12B | 109.3 |
| C17—N2—H2 | 107.2 | H12A—C12—H12B | 108.0 |
| C13—N2—H2 | 107.2 | C12—C13—N2 | 110.3 (3) |
| O1—C1—O2 | 123.0 (3) | C12—C13—H13A | 109.6 |
| O1—C1—C2 | 118.8 (3) | N2—C13—H13A | 109.6 |
| O2—C1—C2 | 118.2 (3) | C12—C13—H13B | 109.6 |
| C7—C2—C3 | 118.2 (3) | N2—C13—H13B | 109.6 |
| C7—C2—C1 | 120.1 (3) | H13A—C13—H13B | 108.1 |
| C3—C2—C1 | 121.7 (3) | N2—C14—C15 | 110.6 (2) |
| O3—C3—C4 | 119.4 (3) | N2—C14—H14A | 109.5 |
| O3—C3—C2 | 120.1 (3) | C15—C14—H14A | 109.5 |
| C4—C3—C2 | 120.6 (3) | N2—C14—H14B | 109.5 |
| C3—C4—C5 | 121.3 (3) | C15—C14—H14B | 109.5 |
| C3—C4—H4 | 119.4 | H14A—C14—H14B | 108.1 |
| C5—C4—H4 | 119.4 | N1—C15—C14 | 111.0 (2) |
| C4—C5—C8 | 123.2 (3) | N1—C15—H15A | 109.4 |
| C4—C5—C6 | 119.2 (3) | C14—C15—H15A | 109.4 |
| C8—C5—C6 | 117.6 (3) | N1—C15—H15B | 109.4 |
| C11—C6—C7 | 122.5 (3) | C14—C15—H15B | 109.4 |
| C11—C6—C5 | 119.6 (3) | H15A—C15—H15B | 108.0 |
| C7—C6—C5 | 117.9 (3) | N1—C16—H16A | 109.5 |
| C2—C7—C6 | 122.8 (3) | N1—C16—H16B | 109.5 |
| C2—C7—H7 | 118.6 | H16A—C16—H16B | 109.5 |
| C6—C7—H7 | 118.6 | N1—C16—H16C | 109.5 |
| C9—C8—C5 | 120.8 (4) | H16A—C16—H16C | 109.5 |
| C9—C8—H8 | 119.6 | H16B—C16—H16C | 109.5 |
| C5—C8—H8 | 119.6 | N2—C17—H17A | 109.5 |
| C8—C9—C10 | 121.7 (3) | N2—C17—H17B | 109.5 |
| C8—C9—H9 | 119.2 | H17A—C17—H17B | 109.5 |
| C10—C9—H9 | 119.2 | N2—C17—H17C | 109.5 |
| C11—C10—C9 | 119.2 (4) | H17A—C17—H17C | 109.5 |
| C11—C10—H10 | 120.4 | H17B—C17—H17C | 109.5 |
| C9—C10—H10 | 120.4 | ||
| O1—C1—C2—C7 | −2.5 (5) | C5—C6—C7—C2 | −1.4 (4) |
| O2—C1—C2—C7 | 177.8 (3) | C4—C5—C8—C9 | −179.6 (3) |
| O1—C1—C2—C3 | 176.7 (3) | C6—C5—C8—C9 | 1.2 (5) |
| O2—C1—C2—C3 | −3.0 (4) | C5—C8—C9—C10 | −1.8 (6) |
| C7—C2—C3—O3 | −178.2 (3) | C8—C9—C10—C11 | 0.9 (6) |
| C1—C2—C3—O3 | 2.6 (4) | C9—C10—C11—C6 | 0.5 (6) |
| C7—C2—C3—C4 | 0.6 (4) | C7—C6—C11—C10 | 178.0 (3) |
| C1—C2—C3—C4 | −178.6 (3) | C5—C6—C11—C10 | −1.0 (5) |
| O3—C3—C4—C5 | 178.8 (3) | C16—N1—C12—C13 | −176.1 (3) |
| C2—C3—C4—C5 | −0.1 (4) | C15—N1—C12—C13 | 60.9 (3) |
| C3—C4—C5—C8 | 179.6 (3) | N1—C12—C13—N2 | −58.3 (4) |
| C3—C4—C5—C6 | −1.2 (4) | C14—N2—C13—C12 | 54.3 (3) |
| C4—C5—C6—C11 | −179.0 (3) | C17—N2—C13—C12 | −179.6 (3) |
| C8—C5—C6—C11 | 0.2 (4) | C17—N2—C14—C15 | −179.8 (3) |
| C4—C5—C6—C7 | 1.9 (4) | C13—N2—C14—C15 | −54.0 (3) |
| C8—C5—C6—C7 | −178.9 (3) | C12—N1—C15—C14 | −60.2 (3) |
| C3—C2—C7—C6 | 0.1 (4) | C16—N1—C15—C14 | 175.6 (3) |
| C1—C2—C7—C6 | 179.3 (3) | N2—C14—C15—N1 | 57.8 (3) |
| C11—C6—C7—C2 | 179.6 (3) |
| H··· | ||||
| O3—H3···O2 | 0.82 | 1.81 | 2.541 (3) | 148 |
| N2—H2···O1i | 0.91 | 1.71 | 2.613 (3) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O2 | 0.82 | 1.81 | 2.541 (3) | 148 |
| N2—H2⋯O1i | 0.91 | 1.71 | 2.613 (3) | 174 |
Symmetry code: (i) .