| Literature DB >> 22412643 |
Weiyan Yin1, Zhi Wang, Zi-Wen Yang.
Abstract
In the mol-ecule of the title compound, C(10)H(10)N(4)OS, the configuration about the C=N double bond is E. The dihedral angle between the thia-diazole and benzene rings is 81.1 (1)°. In the crystal, mol-ecules are linked by N-H⋯N and C-H⋯O hydrogen bonds to form a two-dimensional network parallel with the bc plane.Entities:
Year: 2012 PMID: 22412643 PMCID: PMC3295532 DOI: 10.1107/S1600536812003893
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H10N4OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 7867 reflections |
| θ = 2.2–31.8° | |
| µ = 0.28 mm−1 | |
| β = 106.75 (1)° | Block, colorless |
| 0.16 × 0.12 × 0.12 mm | |
| Bruker SMART APEX CCD diffractometer | 1808 independent reflections |
| Radiation source: fine-focus sealed tube | 1707 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.0°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 5840 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1808 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.61 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | −0.01298 (17) | 0.3905 (3) | 0.3290 (3) | 0.0184 (5) | |
| C2 | −0.03790 (18) | 0.4774 (3) | 0.1867 (3) | 0.0215 (6) | |
| H2 | 0.0110 | 0.5234 | 0.1502 | 0.026* | |
| C3 | −0.13385 (19) | 0.4967 (3) | 0.0985 (4) | 0.0252 (6) | |
| H3 | −0.1507 | 0.5548 | 0.0007 | 0.030* | |
| C4 | −0.20545 (19) | 0.4310 (3) | 0.1531 (4) | 0.0264 (6) | |
| H4 | −0.2712 | 0.4441 | 0.0925 | 0.032* | |
| C5 | −0.18121 (18) | 0.3468 (3) | 0.2954 (4) | 0.0253 (6) | |
| H5 | −0.2304 | 0.3018 | 0.3320 | 0.030* | |
| C6 | −0.08548 (18) | 0.3276 (3) | 0.3849 (3) | 0.0215 (6) | |
| H6 | −0.0692 | 0.2716 | 0.4843 | 0.026* | |
| C7 | 0.08712 (17) | 0.3580 (3) | 0.4188 (3) | 0.0196 (5) | |
| H7 | 0.1040 | 0.3320 | 0.5335 | 0.024* | |
| C8 | 0.30958 (17) | 0.3047 (3) | 0.3626 (3) | 0.0209 (6) | |
| H8A | 0.2771 | 0.2631 | 0.2517 | 0.025* | |
| H8B | 0.3607 | 0.2370 | 0.4222 | 0.025* | |
| C9 | 0.35421 (16) | 0.4469 (3) | 0.3404 (3) | 0.0178 (5) | |
| C12 | 0.42588 (16) | 0.6806 (3) | 0.3667 (3) | 0.0171 (5) | |
| N1 | 0.15225 (14) | 0.3645 (2) | 0.3424 (3) | 0.0208 (5) | |
| N2 | 0.39251 (14) | 0.4743 (2) | 0.2222 (3) | 0.0196 (5) | |
| N3 | 0.43442 (15) | 0.6105 (2) | 0.2357 (3) | 0.0201 (5) | |
| N4 | 0.45809 (15) | 0.8148 (2) | 0.4095 (3) | 0.0213 (5) | |
| H4A | 0.4876 | 0.8624 | 0.3475 | 0.026* | |
| H4B | 0.4498 | 0.8552 | 0.4995 | 0.026* | |
| O1 | 0.24135 (12) | 0.3211 (2) | 0.4548 (2) | 0.0230 (4) | |
| S1 | 0.36427 (4) | 0.58523 (7) | 0.48329 (8) | 0.0189 (2) |
| C1 | 0.0195 (12) | 0.0160 (12) | 0.0206 (14) | −0.0003 (9) | 0.0072 (10) | −0.0032 (10) |
| C2 | 0.0232 (13) | 0.0183 (13) | 0.0249 (14) | −0.0024 (10) | 0.0100 (11) | −0.0010 (10) |
| C3 | 0.0291 (14) | 0.0167 (13) | 0.0267 (15) | 0.0039 (10) | 0.0029 (11) | 0.0012 (11) |
| C4 | 0.0184 (12) | 0.0258 (14) | 0.0328 (16) | 0.0029 (10) | 0.0040 (11) | −0.0073 (12) |
| C5 | 0.0193 (12) | 0.0270 (14) | 0.0325 (16) | −0.0021 (11) | 0.0122 (11) | −0.0026 (12) |
| C6 | 0.0224 (12) | 0.0194 (13) | 0.0243 (14) | 0.0006 (10) | 0.0095 (11) | 0.0000 (10) |
| C7 | 0.0206 (12) | 0.0162 (12) | 0.0222 (14) | −0.0008 (10) | 0.0064 (10) | 0.0007 (10) |
| C8 | 0.0168 (11) | 0.0216 (13) | 0.0260 (15) | 0.0008 (10) | 0.0090 (10) | −0.0007 (10) |
| C9 | 0.0144 (11) | 0.0186 (12) | 0.0202 (13) | 0.0033 (9) | 0.0049 (10) | 0.0010 (10) |
| C12 | 0.0119 (10) | 0.0237 (13) | 0.0163 (13) | 0.0037 (9) | 0.0051 (9) | 0.0027 (10) |
| N1 | 0.0165 (10) | 0.0211 (11) | 0.0218 (12) | −0.0007 (8) | 0.0007 (9) | 0.0007 (9) |
| N2 | 0.0180 (10) | 0.0227 (11) | 0.0190 (11) | 0.0005 (8) | 0.0067 (8) | −0.0010 (9) |
| N3 | 0.0200 (10) | 0.0203 (11) | 0.0212 (12) | 0.0026 (8) | 0.0079 (9) | 0.0001 (9) |
| N4 | 0.0257 (11) | 0.0207 (11) | 0.0210 (12) | −0.0044 (9) | 0.0122 (9) | −0.0029 (9) |
| O1 | 0.0157 (8) | 0.0283 (10) | 0.0239 (10) | 0.0009 (7) | 0.0038 (7) | 0.0023 (8) |
| S1 | 0.0204 (3) | 0.0219 (3) | 0.0177 (4) | −0.0020 (2) | 0.0106 (2) | −0.0010 (2) |
| C1—C2 | 1.396 (4) | C8—O1 | 1.426 (3) |
| C1—C6 | 1.396 (4) | C8—C9 | 1.503 (3) |
| C1—C7 | 1.461 (3) | C8—H8A | 0.9900 |
| C2—C3 | 1.386 (4) | C8—H8B | 0.9900 |
| C2—H2 | 0.9500 | C9—N2 | 1.291 (3) |
| C3—C4 | 1.390 (4) | C9—S1 | 1.730 (3) |
| C3—H3 | 0.9500 | C12—N3 | 1.309 (3) |
| C4—C5 | 1.381 (4) | C12—N4 | 1.341 (3) |
| C4—H4 | 0.9500 | C12—S1 | 1.742 (2) |
| C5—C6 | 1.386 (4) | N1—O1 | 1.419 (3) |
| C5—H5 | 0.9500 | N2—N3 | 1.392 (3) |
| C6—H6 | 0.9500 | N4—H4A | 0.8800 |
| C7—N1 | 1.285 (3) | N4—H4B | 0.8800 |
| C7—H7 | 0.9500 | ||
| C2—C1—C6 | 119.5 (2) | O1—C8—C9 | 111.4 (2) |
| C2—C1—C7 | 122.2 (2) | O1—C8—H8A | 109.4 |
| C6—C1—C7 | 118.3 (2) | C9—C8—H8A | 109.4 |
| C3—C2—C1 | 120.1 (2) | O1—C8—H8B | 109.4 |
| C3—C2—H2 | 119.9 | C9—C8—H8B | 109.4 |
| C1—C2—H2 | 119.9 | H8A—C8—H8B | 108.0 |
| C2—C3—C4 | 120.0 (3) | N2—C9—C8 | 124.3 (2) |
| C2—C3—H3 | 120.0 | N2—C9—S1 | 114.39 (19) |
| C4—C3—H3 | 120.0 | C8—C9—S1 | 121.23 (19) |
| C5—C4—C3 | 120.1 (2) | N3—C12—N4 | 125.0 (2) |
| C5—C4—H4 | 119.9 | N3—C12—S1 | 113.79 (19) |
| C3—C4—H4 | 119.9 | N4—C12—S1 | 121.15 (19) |
| C4—C5—C6 | 120.3 (2) | C7—N1—O1 | 108.5 (2) |
| C4—C5—H5 | 119.9 | C9—N2—N3 | 113.0 (2) |
| C6—C5—H5 | 119.9 | C12—N3—N2 | 112.0 (2) |
| C5—C6—C1 | 120.0 (3) | C12—N4—H4A | 120.0 |
| C5—C6—H6 | 120.0 | C12—N4—H4B | 120.0 |
| C1—C6—H6 | 120.0 | H4A—N4—H4B | 120.0 |
| N1—C7—C1 | 119.9 (2) | N1—O1—C8 | 108.28 (19) |
| N1—C7—H7 | 120.0 | C9—S1—C12 | 86.84 (12) |
| C1—C7—H7 | 120.0 | ||
| C6—C1—C2—C3 | −2.3 (4) | C1—C7—N1—O1 | −177.0 (2) |
| C7—C1—C2—C3 | 175.2 (2) | C8—C9—N2—N3 | −176.0 (2) |
| C1—C2—C3—C4 | 0.9 (4) | S1—C9—N2—N3 | 0.3 (3) |
| C2—C3—C4—C5 | 0.1 (4) | N4—C12—N3—N2 | −178.9 (2) |
| C3—C4—C5—C6 | 0.2 (4) | S1—C12—N3—N2 | −0.6 (3) |
| C4—C5—C6—C1 | −1.6 (4) | C9—N2—N3—C12 | 0.2 (3) |
| C2—C1—C6—C5 | 2.6 (4) | C7—N1—O1—C8 | 170.3 (2) |
| C7—C1—C6—C5 | −175.0 (2) | C9—C8—O1—N1 | 83.4 (2) |
| C2—C1—C7—N1 | −24.1 (4) | N2—C9—S1—C12 | −0.50 (19) |
| C6—C1—C7—N1 | 153.4 (2) | C8—C9—S1—C12 | 175.9 (2) |
| O1—C8—C9—N2 | −156.5 (2) | N3—C12—S1—C9 | 0.63 (19) |
| O1—C8—C9—S1 | 27.5 (3) | N4—C12—S1—C9 | 179.0 (2) |
| H··· | ||||
| N4—H4 | 0.88 | 2.24 | 3.077 (3) | 159 |
| N4—H4 | 0.88 | 2.07 | 2.929 (3) | 164 |
| C8—H8 | 0.99 | 2.51 | 3.468 (3) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.88 | 2.24 | 3.077 (3) | 159 |
| N4—H4 | 0.88 | 2.07 | 2.929 (3) | 164 |
| C8—H8 | 0.99 | 2.51 | 3.468 (3) | 163 |
Symmetry codes: (i) ; (ii) ; (iii) .