Literature DB >> 22412557

(E)-4-Hy-droxy-N'-(2-hy-droxy-3,5-diiodo-benzyl-idene)-3-meth-oxy-benzohydrazide methanol monosolvate.

Xiao-Yan Li1.   

Abstract

In the title compound, C(15)H(12)I(2)N(2)O(4)·CH(3)OH, the hydrazone mol-ecule exists in an E conformation with respect to the C=N bond. The dihedral angle between the rings is 11.9 (2)°. There is one intra-molecular O-H⋯N hydrogen bond in the hydrazone mol-ecule. In the crystal, the hydrazone and methanol mol-ecules are linked through O-H⋯O and N-H⋯O hydrogen bonds and C-H⋯O inter-actions to form two-dimensional networks lying parallel to (001).

Entities:  

Year:  2012        PMID: 22412557      PMCID: PMC3295446          DOI: 10.1107/S1600536812004552

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the syntheses and crystal structures of hydrazone compounds, see: Hashemian et al. (2011 ▶); Lei (2011 ▶); Shalash et al. (2010 ▶). For the crystal structures of similar compounds, reported recently by the author, see: Li (2011a ▶,b ▶).

Experimental

Crystal data

C15H12I2N2O4·CH4O M = 570.11 Orthorhombic, a = 19.467 (3) Å b = 12.655 (2) Å c = 16.138 (2) Å V = 3975.5 (11) Å3 Z = 8 Mo Kα radiation μ = 3.19 mm−1 T = 298 K 0.23 × 0.20 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.527, T max = 0.568 22354 measured reflections 4315 independent reflections 3198 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.091 S = 1.02 4315 reflections 239 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.12 e Å−3 Δρmin = −1.35 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812004552/su2374sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812004552/su2374Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812004552/su2374Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12I2N2O4·CH4OF(000) = 2176
Mr = 570.11Dx = 1.905 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 6406 reflections
a = 19.467 (3) Åθ = 2.3–26.0°
b = 12.655 (2) ŵ = 3.19 mm1
c = 16.138 (2) ÅT = 298 K
V = 3975.5 (11) Å3Block, colourless
Z = 80.23 × 0.20 × 0.20 mm
Bruker SMART CCD area-detector diffractometer4315 independent reflections
Radiation source: fine-focus sealed tube3198 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
ω scansθmax = 27.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→24
Tmin = 0.527, Tmax = 0.568k = −15→15
22354 measured reflectionsl = −20→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.027P)2 + 9.4128P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
4315 reflectionsΔρmax = 1.12 e Å3
239 parametersΔρmin = −1.35 e Å3
3 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00222 (10)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.30599 (2)0.65273 (4)0.22384 (2)0.0780 (2)
I20.44485 (3)1.03076 (3)0.37750 (3)0.0875 (2)
O10.42798 (16)0.5423 (2)0.3180 (2)0.0600 (11)
O20.53658 (14)0.3091 (2)0.40531 (19)0.0511 (10)
O30.81379 (14)0.1047 (2)0.53841 (19)0.0469 (10)
O40.72081 (16)0.0227 (2)0.4401 (2)0.0579 (11)
N10.53819 (16)0.5213 (3)0.4091 (2)0.0435 (11)
N20.59137 (17)0.4611 (3)0.4418 (2)0.0430 (11)
C10.48852 (19)0.6898 (3)0.3790 (2)0.0400 (12)
C20.4343 (2)0.6470 (3)0.3315 (3)0.0430 (12)
C30.3854 (2)0.7157 (4)0.2971 (3)0.0480 (14)
C40.3886 (2)0.8237 (4)0.3112 (3)0.0550 (16)
C50.4420 (2)0.8658 (3)0.3584 (3)0.0527 (16)
C60.4916 (2)0.8002 (3)0.3918 (3)0.0480 (12)
C70.5422 (2)0.6220 (3)0.4159 (3)0.0427 (12)
C80.58719 (19)0.3537 (3)0.4359 (2)0.0378 (11)
C90.64765 (18)0.2924 (3)0.4669 (2)0.0337 (11)
C100.65308 (19)0.1866 (3)0.4410 (2)0.0393 (12)
C110.70893 (19)0.1254 (3)0.4644 (2)0.0378 (11)
C120.76007 (18)0.1695 (3)0.5169 (2)0.0349 (11)
C130.75389 (19)0.2734 (3)0.5434 (2)0.0382 (11)
C140.69824 (19)0.3345 (3)0.5188 (2)0.0383 (11)
C150.6690 (3)−0.0275 (4)0.3916 (4)0.074 (2)
O50.40228 (15)0.2948 (3)0.3656 (2)0.0545 (10)
C160.3918 (3)0.2952 (5)0.2788 (3)0.072 (2)
H10.459800.511000.340600.0900*
H20.6291 (17)0.493 (4)0.463 (3)0.0800*
H30.839 (2)0.136 (4)0.574 (3)0.0800*
H40.355100.868000.289200.0660*
H60.527300.828900.422900.0570*
H70.579000.652400.444000.0510*
H100.618900.157400.407900.0470*
H130.787200.302300.577900.0460*
H140.694600.404000.537000.0460*
H15A0.62660−0.028300.422000.1110*
H15B0.68270−0.098700.379500.1110*
H15C0.662800.010700.340800.1110*
H50.4435 (11)0.311 (4)0.376 (3)0.0800*
H16A0.393700.366600.258600.1080*
H16B0.347700.265400.266300.1080*
H16C0.427100.254100.252400.1080*
U11U22U33U12U13U23
I10.0504 (2)0.1183 (4)0.0653 (2)0.0102 (2)−0.0165 (2)−0.0126 (2)
I20.1299 (4)0.0430 (2)0.0895 (3)0.0164 (2)0.0026 (3)0.0088 (2)
O10.0545 (19)0.0484 (18)0.077 (2)0.0036 (14)−0.0186 (17)−0.0037 (16)
O20.0344 (15)0.0555 (18)0.0634 (19)0.0008 (13)−0.0115 (14)−0.0053 (15)
O30.0377 (16)0.0410 (15)0.0620 (19)0.0103 (12)−0.0107 (13)−0.0080 (14)
O40.0627 (19)0.0359 (16)0.075 (2)0.0051 (14)−0.0197 (17)−0.0150 (15)
N10.0366 (17)0.046 (2)0.0480 (19)0.0088 (15)−0.0006 (15)0.0069 (16)
N20.0347 (17)0.0403 (19)0.054 (2)0.0076 (14)−0.0071 (16)0.0050 (16)
C10.036 (2)0.043 (2)0.041 (2)0.0050 (17)0.0046 (17)0.0060 (18)
C20.038 (2)0.048 (2)0.043 (2)0.0048 (18)0.0014 (17)0.0007 (18)
C30.037 (2)0.068 (3)0.039 (2)0.010 (2)−0.0003 (17)0.005 (2)
C40.058 (3)0.059 (3)0.048 (2)0.023 (2)0.001 (2)0.014 (2)
C50.064 (3)0.040 (2)0.054 (3)0.012 (2)0.007 (2)0.011 (2)
C60.047 (2)0.047 (2)0.050 (2)−0.0020 (19)0.002 (2)0.002 (2)
C70.034 (2)0.049 (2)0.045 (2)0.0057 (17)−0.0022 (17)0.0046 (18)
C80.0325 (19)0.044 (2)0.037 (2)0.0020 (17)0.0008 (16)−0.0025 (17)
C90.0271 (17)0.0349 (19)0.039 (2)−0.0009 (15)0.0010 (15)0.0005 (16)
C100.037 (2)0.038 (2)0.043 (2)−0.0053 (16)−0.0061 (17)−0.0009 (17)
C110.039 (2)0.0323 (19)0.042 (2)−0.0013 (15)0.0000 (17)−0.0040 (16)
C120.0302 (18)0.0335 (19)0.041 (2)0.0017 (15)0.0013 (15)−0.0006 (16)
C130.0305 (18)0.038 (2)0.046 (2)−0.0033 (16)−0.0053 (17)−0.0059 (17)
C140.0365 (19)0.0314 (19)0.047 (2)0.0013 (16)−0.0014 (17)−0.0025 (17)
C150.087 (4)0.045 (3)0.090 (4)−0.004 (3)−0.028 (3)−0.026 (3)
O50.0357 (15)0.072 (2)0.0557 (19)−0.0057 (15)0.0036 (14)−0.0073 (16)
C160.082 (4)0.075 (4)0.060 (3)−0.011 (3)−0.007 (3)−0.009 (3)
I1—C32.103 (4)C5—C61.383 (6)
I2—C52.111 (4)C8—C91.496 (5)
O1—C21.348 (5)C9—C141.398 (5)
O2—C81.238 (5)C9—C101.407 (5)
O3—C121.374 (4)C10—C111.387 (5)
O4—C111.377 (5)C11—C121.421 (5)
O4—C151.426 (7)C12—C131.388 (5)
O1—H10.8200C13—C141.389 (5)
O3—H30.85 (5)C4—H40.9300
O5—C161.416 (6)C6—H60.9300
O5—H50.85 (3)C7—H70.9300
N1—C71.282 (5)C10—H100.9300
N1—N21.390 (5)C13—H130.9300
N2—C81.365 (5)C14—H140.9300
N2—H20.91 (4)C15—H15C0.9600
C1—C61.414 (5)C15—H15A0.9600
C1—C71.477 (5)C15—H15B0.9600
C1—C21.413 (6)C16—H16A0.9600
C2—C31.404 (6)C16—H16B0.9600
C3—C41.387 (7)C16—H16C0.9600
C4—C51.395 (6)
C11—O4—C15117.3 (3)C10—C11—C12119.5 (3)
C2—O1—H1109.00O4—C11—C10125.5 (3)
C12—O3—H3109 (3)O3—C12—C11116.7 (3)
C16—O5—H5109 (3)C11—C12—C13119.7 (3)
N2—N1—C7117.9 (3)O3—C12—C13123.6 (3)
N1—N2—C8118.4 (3)C12—C13—C14120.5 (3)
C8—N2—H2121 (3)C9—C14—C13120.6 (3)
N1—N2—H2120 (3)C5—C4—H4120.00
C2—C1—C7121.6 (3)C3—C4—H4120.00
C6—C1—C7119.0 (3)C1—C6—H6120.00
C2—C1—C6119.3 (3)C5—C6—H6120.00
O1—C2—C3118.9 (4)C1—C7—H7120.00
C1—C2—C3118.9 (4)N1—C7—H7120.00
O1—C2—C1122.2 (4)C9—C10—H10120.00
I1—C3—C4119.9 (3)C11—C10—H10120.00
C2—C3—C4121.0 (4)C14—C13—H13120.00
I1—C3—C2119.1 (3)C12—C13—H13120.00
C3—C4—C5120.0 (4)C9—C14—H14120.00
C4—C5—C6120.3 (4)C13—C14—H14120.00
I2—C5—C4118.5 (3)O4—C15—H15B109.00
I2—C5—C6121.2 (3)O4—C15—H15C109.00
C1—C6—C5120.5 (4)O4—C15—H15A109.00
N1—C7—C1120.0 (4)H15A—C15—H15C109.00
N2—C8—C9116.5 (3)H15B—C15—H15C110.00
O2—C8—N2122.0 (3)H15A—C15—H15B109.00
O2—C8—C9121.5 (3)O5—C16—H16A109.00
C8—C9—C14123.8 (3)O5—C16—H16B110.00
C10—C9—C14119.2 (3)O5—C16—H16C109.00
C8—C9—C10117.0 (3)H16A—C16—H16B109.00
C9—C10—C11120.6 (3)H16A—C16—H16C109.00
O4—C11—C12115.0 (3)H16B—C16—H16C110.00
C15—O4—C11—C10−4.7 (6)C3—C4—C5—C6−0.5 (7)
C15—O4—C11—C12176.2 (4)I2—C5—C6—C1179.4 (3)
C7—N1—N2—C8179.1 (4)C4—C5—C6—C1−0.4 (7)
N2—N1—C7—C1177.4 (3)O2—C8—C9—C1016.1 (5)
N1—N2—C8—O2−2.8 (5)O2—C8—C9—C14−164.4 (3)
N1—N2—C8—C9176.1 (3)N2—C8—C9—C10−162.8 (3)
C6—C1—C2—O1−179.1 (4)N2—C8—C9—C1416.8 (5)
C6—C1—C2—C31.0 (6)C8—C9—C10—C11177.6 (3)
C7—C1—C2—O10.8 (6)C14—C9—C10—C11−2.0 (5)
C7—C1—C2—C3−179.1 (4)C8—C9—C14—C13−178.4 (3)
C2—C1—C6—C50.2 (6)C10—C9—C14—C131.2 (5)
C7—C1—C6—C5−179.7 (4)C9—C10—C11—O4−177.3 (3)
C2—C1—C7—N1−3.9 (6)C9—C10—C11—C121.7 (5)
C6—C1—C7—N1176.0 (4)O4—C11—C12—O3−1.4 (5)
O1—C2—C3—I1−1.5 (6)O4—C11—C12—C13178.5 (3)
O1—C2—C3—C4178.2 (4)C10—C11—C12—O3179.5 (3)
C1—C2—C3—I1178.5 (3)C10—C11—C12—C13−0.7 (5)
C1—C2—C3—C4−1.9 (7)O3—C12—C13—C14179.7 (3)
I1—C3—C4—C5−178.7 (3)C11—C12—C13—C14−0.2 (5)
C2—C3—C4—C51.7 (7)C12—C13—C14—C9−0.1 (5)
C3—C4—C5—I2179.7 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.892.614 (4)147
O5—H5···O20.85 (3)1.87 (2)2.698 (4)165 (5)
N2—H2···O3i0.91 (4)2.17 (5)3.024 (4)157 (3)
O3—H3···O5ii0.85 (5)1.80 (4)2.643 (4)170 (4)
C14—H14···O3i0.932.553.442 (5)162
C16—H16A···O10.962.513.267 (7)135
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.892.614 (4)147
O5—H5⋯O20.85 (3)1.87 (2)2.698 (4)165 (5)
N2—H2⋯O3i0.91 (4)2.17 (5)3.024 (4)157 (3)
O3—H3⋯O5ii0.85 (5)1.80 (4)2.643 (4)170 (4)
C14—H14⋯O3i0.932.553.442 (5)162
C16—H16A⋯O10.962.513.267 (7)135

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-4-Hy-droxy-N'-(4-hy-droxy-3-meth-oxy-benzyl-idene)benzohydrazide.

Authors:  Marwan Shalash; Abdussalam Salhin; Rohana Adnan; Chin Sing Yeap; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13

3.  N'-(3,4-Dimeth-oxy-benzyl-idene)benzo-hydrazide.

Authors:  Saeedeh Hashemian; Vahideh Ghaeinee; Behrouz Notash
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

4.  3-Chloro-N'-(2,4-dichloro-benzyl-idene)benzohydrazide.

Authors:  Yan Lei
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

5.  (E)-N'-(3,5-Dichloro-2-hy-droxy-benzyl-idene)-2-meth-oxy-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-25

6.  (E)-N'-(5-Bromo-2-meth-oxy-benzyl-idene)-2-chloro-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27
  6 in total
  1 in total

1.  (E)-4-Nitro-N'-(3-nitro-benzyl-idene)benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10
  1 in total

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