Literature DB >> 21522678

N'-(3,4-Dimeth-oxy-benzyl-idene)benzo-hydrazide.

Saeedeh Hashemian, Vahideh Ghaeinee, Behrouz Notash.   

Abstract

The crystal structure of the title Schiff base compound, C(16)H(16)N(2)O(3), is characterized by chains of mol-ecules linked by inter-molecular N-H⋯O hydrogen bonds running along the c axis. Further stabilization is provided by weak C-H⋯O contacts. The dihedral angle between the aromatic rings is 38.31 (7)°.

Entities:  

Year:  2010        PMID: 21522678      PMCID: PMC3050232          DOI: 10.1107/S1600536810052128

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures see: Alhadi et al. (2009 ▶); Das & Pal (2004 ▶); Tamboura et al. (2009 ▶); Zhou et al. (2009 ▶).

Experimental

Crystal data

C16H16N2O3 M = 284.31 Monoclinic, a = 12.612 (3) Å b = 11.291 (2) Å c = 9.892 (2) Å β = 95.46 (3)° V = 1402.3 (5) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 120 K 0.5 × 0.4 × 0.15 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: numerical shape of crystal determined optically T min = 0.954, T max = 0.984 9840 measured reflections 3758 independent reflections 3054 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.131 S = 1.03 3758 reflections 200 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.24 e Å−3 Data collection: X-AREA (Stoe & Cie, 2005 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810052128/bt5434sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052128/bt5434Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O3F(000) = 600
Mr = 284.31Dx = 1.347 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3758 reflections
a = 12.612 (3) Åθ = 2.4–29.2°
b = 11.291 (2) ŵ = 0.09 mm1
c = 9.892 (2) ÅT = 120 K
β = 95.46 (3)°Plate, colorless
V = 1402.3 (5) Å30.5 × 0.4 × 0.15 mm
Z = 4
Stoe IPDS II diffractometer3758 independent reflections
Radiation source: fine-focus sealed tube3054 reflections with I > 2σ(I)
graphiteRint = 0.052
Detector resolution: 0.15 mm pixels mm-1θmax = 29.2°, θmin = 2.4°
rotation method scansh = −17→17
Absorption correction: numerical shape of crystal determined opticallyk = −13→15
Tmin = 0.954, Tmax = 0.984l = −13→13
9840 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.131H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.068P)2 + 0.4464P] where P = (Fo2 + 2Fc2)/3
3758 reflections(Δ/σ)max = 0.001
200 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N20.77928 (9)0.23464 (11)0.31038 (12)0.0204 (2)
O20.21028 (8)0.00051 (9)0.36444 (11)0.0261 (2)
C100.84378 (10)0.23202 (11)0.20934 (13)0.0184 (2)
N10.67552 (9)0.19349 (11)0.28696 (12)0.0213 (2)
O10.30865 (8)−0.00086 (9)0.14959 (10)0.0241 (2)
C20.46487 (10)0.09658 (12)0.26416 (13)0.0205 (3)
H20.50130.09410.18670.025*
C110.95522 (10)0.27473 (12)0.24654 (13)0.0185 (3)
C90.62290 (10)0.19298 (12)0.39172 (14)0.0213 (3)
C10.51348 (10)0.14808 (12)0.38429 (14)0.0205 (3)
C40.30798 (10)0.05297 (12)0.37871 (14)0.0216 (3)
C30.36354 (10)0.04990 (12)0.26093 (14)0.0208 (3)
C60.45799 (11)0.15271 (13)0.49842 (14)0.0232 (3)
H60.48950.18710.57770.028*
C121.03648 (11)0.21544 (13)0.18854 (14)0.0229 (3)
H121.02000.15240.12980.028*
C50.35478 (11)0.10607 (13)0.49557 (14)0.0233 (3)
H50.31770.11080.57230.028*
C160.97968 (11)0.37076 (13)0.33195 (14)0.0242 (3)
H160.92580.41130.37020.029*
C151.08551 (12)0.40592 (14)0.35984 (15)0.0286 (3)
H151.10210.47060.41620.034*
C131.14179 (11)0.24953 (13)0.21765 (15)0.0264 (3)
H131.19580.20890.17970.032*
C70.36427 (11)−0.00915 (13)0.03132 (14)0.0246 (3)
H7A0.38180.06890.00210.037*
H7B0.3200−0.0479−0.03960.037*
H7C0.4285−0.05400.05180.037*
C141.16611 (11)0.34472 (14)0.30382 (15)0.0278 (3)
H141.23670.36760.32410.033*
C80.14420 (12)0.01622 (15)0.47217 (16)0.0305 (3)
H8A0.1791−0.01610.55450.046*
H8B0.0776−0.02380.45020.046*
H8C0.13130.09920.48440.046*
O30.81626 (8)0.19329 (9)0.09466 (10)0.0229 (2)
H90.6538 (15)0.2201 (17)0.4783 (19)0.030 (5)*
H2A0.8042 (16)0.2565 (18)0.392 (2)0.036 (5)*
U11U22U33U12U13U23
N20.0185 (5)0.0237 (6)0.0189 (5)−0.0038 (4)0.0007 (4)−0.0015 (4)
O20.0212 (5)0.0279 (5)0.0304 (5)−0.0057 (4)0.0089 (4)−0.0066 (4)
C100.0200 (5)0.0165 (6)0.0187 (6)0.0008 (4)0.0010 (4)0.0011 (5)
N10.0183 (5)0.0223 (6)0.0231 (5)−0.0025 (4)0.0001 (4)−0.0003 (4)
O10.0200 (4)0.0283 (5)0.0240 (5)−0.0045 (4)0.0025 (4)−0.0055 (4)
C20.0198 (6)0.0214 (6)0.0207 (6)−0.0003 (5)0.0032 (5)−0.0005 (5)
C110.0194 (6)0.0182 (6)0.0177 (6)−0.0011 (4)0.0009 (4)0.0031 (5)
C90.0202 (6)0.0205 (6)0.0230 (6)−0.0016 (5)0.0004 (5)−0.0016 (5)
C10.0196 (6)0.0188 (6)0.0230 (6)−0.0005 (5)0.0014 (5)−0.0004 (5)
C40.0194 (6)0.0190 (6)0.0267 (6)−0.0009 (5)0.0042 (5)−0.0007 (5)
C30.0207 (6)0.0193 (6)0.0224 (6)0.0000 (5)0.0013 (5)−0.0007 (5)
C60.0236 (6)0.0233 (7)0.0226 (6)−0.0007 (5)0.0013 (5)−0.0021 (5)
C120.0229 (6)0.0211 (6)0.0248 (6)0.0010 (5)0.0023 (5)−0.0004 (5)
C50.0231 (6)0.0247 (7)0.0230 (6)0.0001 (5)0.0067 (5)−0.0013 (5)
C160.0240 (6)0.0237 (7)0.0252 (6)−0.0021 (5)0.0047 (5)−0.0036 (5)
C150.0294 (7)0.0306 (7)0.0257 (7)−0.0101 (6)0.0025 (6)−0.0053 (6)
C130.0215 (6)0.0267 (7)0.0315 (7)0.0029 (5)0.0041 (5)0.0020 (6)
C70.0227 (6)0.0274 (7)0.0239 (6)−0.0035 (5)0.0029 (5)−0.0044 (5)
C140.0196 (6)0.0359 (8)0.0274 (7)−0.0068 (5)−0.0004 (5)0.0032 (6)
C80.0253 (7)0.0340 (8)0.0340 (8)−0.0067 (6)0.0127 (6)−0.0073 (6)
O30.0236 (5)0.0257 (5)0.0188 (4)−0.0011 (4)−0.0005 (4)−0.0013 (4)
N2—C101.3477 (18)C4—C31.416 (2)
N2—N11.3872 (15)C6—C51.4020 (19)
N2—H2A0.87 (2)C6—H60.9300
O2—C41.3624 (16)C12—C131.3865 (19)
O2—C81.4250 (18)C12—H120.9300
C10—O31.2344 (16)C5—H50.9300
C10—C111.4983 (17)C16—C151.3947 (19)
N1—C91.2826 (19)C16—H160.9300
O1—C31.3695 (16)C15—C141.387 (2)
O1—C71.4233 (17)C15—H150.9300
C2—C31.3800 (18)C13—C141.388 (2)
C2—C11.4098 (18)C13—H130.9300
C2—H20.9300C7—H7A0.9600
C11—C161.3910 (19)C7—H7B0.9600
C11—C121.3927 (19)C7—H7C0.9600
C9—C11.4655 (18)C14—H140.9300
C9—H90.957 (19)C8—H8A0.9600
C1—C61.385 (2)C8—H8B0.9600
C4—C51.3836 (19)C8—H8C0.9600
C10—N2—N1119.69 (11)C13—C12—C11120.60 (13)
C10—N2—H2A120.2 (13)C13—C12—H12119.7
N1—N2—H2A119.9 (13)C11—C12—H12119.7
C4—O2—C8117.13 (11)C4—C5—C6120.07 (13)
O3—C10—N2123.54 (12)C4—C5—H5120.0
O3—C10—C11120.99 (12)C6—C5—H5120.0
N2—C10—C11115.41 (11)C11—C16—C15119.66 (13)
C9—N1—N2114.77 (11)C11—C16—H16120.2
C3—O1—C7115.95 (10)C15—C16—H16120.2
C3—C2—C1120.30 (13)C14—C15—C16120.20 (14)
C3—C2—H2119.9C14—C15—H15119.9
C1—C2—H2119.9C16—C15—H15119.9
C16—C11—C12119.70 (12)C12—C13—C14119.60 (14)
C16—C11—C10123.28 (12)C12—C13—H13120.2
C12—C11—C10117.00 (12)C14—C13—H13120.2
N1—C9—C1121.22 (12)O1—C7—H7A109.5
N1—C9—H9121.5 (11)O1—C7—H7B109.5
C1—C9—H9117.2 (11)H7A—C7—H7B109.5
C6—C1—C2119.33 (12)O1—C7—H7C109.5
C6—C1—C9119.52 (12)H7A—C7—H7C109.5
C2—C1—C9121.11 (12)H7B—C7—H7C109.5
O2—C4—C5125.78 (13)C15—C14—C13120.23 (13)
O2—C4—C3114.69 (12)C15—C14—H14119.9
C5—C4—C3119.53 (12)C13—C14—H14119.9
O1—C3—C2125.07 (13)O2—C8—H8A109.5
O1—C3—C4114.84 (12)O2—C8—H8B109.5
C2—C3—C4120.09 (12)H8A—C8—H8B109.5
C1—C6—C5120.65 (13)O2—C8—H8C109.5
C1—C6—H6119.7H8A—C8—H8C109.5
C5—C6—H6119.7H8B—C8—H8C109.5
N1—N2—C10—O3−0.8 (2)O2—C4—C3—O12.59 (17)
N1—N2—C10—C11−178.05 (11)C5—C4—C3—O1−177.78 (12)
C10—N2—N1—C9175.87 (12)O2—C4—C3—C2−177.78 (13)
O3—C10—C11—C16143.82 (14)C5—C4—C3—C21.9 (2)
N2—C10—C11—C16−38.82 (18)C2—C1—C6—C50.5 (2)
O3—C10—C11—C12−34.55 (18)C9—C1—C6—C5−177.44 (13)
N2—C10—C11—C12142.80 (13)C16—C11—C12—C131.5 (2)
N2—N1—C9—C1−177.84 (12)C10—C11—C12—C13179.95 (12)
C3—C2—C1—C6−0.8 (2)O2—C4—C5—C6177.36 (13)
C3—C2—C1—C9177.03 (12)C3—C4—C5—C6−2.2 (2)
N1—C9—C1—C6−177.81 (13)C1—C6—C5—C41.1 (2)
N1—C9—C1—C24.3 (2)C12—C11—C16—C15−0.7 (2)
C8—O2—C4—C59.6 (2)C10—C11—C16—C15−179.04 (13)
C8—O2—C4—C3−170.84 (13)C11—C16—C15—C14−0.6 (2)
C7—O1—C3—C22.7 (2)C11—C12—C13—C14−1.0 (2)
C7—O1—C3—C4−177.68 (12)C16—C15—C14—C131.2 (2)
C1—C2—C3—O1179.27 (13)C12—C13—C14—C15−0.4 (2)
C1—C2—C3—C4−0.3 (2)
D—H···AD—HH···AD···AD—H···A
C9—H9···O3i0.957 (19)2.455 (19)3.2702 (18)142.9 (15)
C7—H7B···O3ii0.962.403.2434 (18)146.
N2—H2A···O3i0.87 (2)2.07 (2)2.9219 (16)163.2 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9⋯O3i0.957 (19)2.455 (19)3.2702 (18)142.9 (15)
C7—H7B⋯O3ii0.962.403.2434 (18)146
N2—H2A⋯O3i0.87 (2)2.07 (2)2.9219 (16)163.2 (18)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N'-(3,4-Dimethoxy-benzyl-idene)aceto-hydrazide.

Authors:  Bao-Cheng Zhou; Lu-Ping Lv; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25

3.  N'-(2,4-Dimethoxy-benzyl-idene)-3,4,5-trihydroxy-benzohydrazide ethanol solvate.

Authors:  Abeer A Alhadi; Siti Munirah Saharin; Hapipah Mohd Ali; Ward T Robinson; Mahmood A Abdulla
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-23

4.  Chlorido[N'-(2-oxidobenzil-idene)acetohydrazide-κO,N',O']copper(II) dihydrate.

Authors:  Farba Bouyagui Tamboura; Mohamed Gaye; Abdou Salam Sall; Aliou Hamady Barry; Youssouph Bah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08
  4 in total
  16 in total

1.  (E)-N'-(3,5-Dichloro-2-hy-droxy-benzyl-idene)-2-meth-oxy-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-25

2.  2-Cyano-N'-[1-(2-hy-droxy-phen-yl)ethyl-idene]acetohydrazide monohydrate.

Authors:  Hongbo Li; Peng Chen; Zhonglu You
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22

3.  N'-(2-Hy-droxy-benzyl-idene)-3-methyl-benzohydrazide.

Authors:  Zeng-Xin Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-25

4.  2-Cyano-N'-(2-hy-droxy-3-meth-oxy-benzyl-idene)acetohydrazide.

Authors:  Hongbo Li; Peng Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

5.  2-Cyano-N'-(5-hy-droxy-2-nitro-benzyl-idene)acetohydrazide monohydrate.

Authors:  Hongbo Li; Xiaocheng Ni
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

6.  (E)-N'-(5-Bromo-2-hy-droxy-3-meth-oxy-benzyl-idene)-1H-indole-3-carbo-hydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

7.  (E)-N'-(3-Fluoro-benzyl-idene)-3-nitro-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17

8.  (E)-N'-(2-Meth-oxy-benzyl-idene)-3-nitro-benzohydrazide.

Authors:  Jin-Wu Guo; Jun-Ying Ma; Chao-Wei Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-02

9.  (E)-2-Chloro-N'-(4-hy-droxy-benzyl-idene)-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17

10.  N'-[(1E)-(2-Hy-droxy-naphthalen-1-yl)methyl-idene]-2-meth-oxy-benzohydrazide.

Authors:  Xiao-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30
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