Literature DB >> 22407334

Acoustic deposition with NIMS as a high-throughput enzyme activity assay.

Matthew Greving1, Xiaoliang Cheng, Wolfgang Reindl, Benjamin Bowen, Kai Deng, Katherine Louie, Michael Nyman, Joseph Cohen, Anup Singh, Blake Simmons, Paul Adams, Gary Siuzdak, Trent Northen.   

Abstract

Mass spectrometry (MS)-based enzyme assay has been shown to be a useful tool for screening enzymatic activities from environmental samples. Recently, reported approaches for high-specificity multiplexed characterization of enzymatic activities allow for providing detailed information on the range of enzymatic products and monitoring multiple enzymatic reactions. However, the throughput has been limited by the slow liquid-liquid handling and manual analysis. This rapid communication demonstrates the integration of acoustic sample deposition with nanostructure initiator mass spectrometry (NIMS) imaging to provide reproducible measurements of multiple enzymatic reactions at a throughput that is tenfold to 100-fold faster than conventional MS-based enzyme assay. It also provides a simple means for the visualization of multiple reactions and reaction pathways.

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Year:  2012        PMID: 22407334     DOI: 10.1007/s00216-012-5908-8

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  10 in total

1.  A High-Throughput Mass Spectrometric Enzyme Activity Assay Enabling the Discovery of Cytochrome P450 Biocatalysts.

Authors:  Tristan de Rond; Jian Gao; Amin Zargar; Markus de Raad; Jack Cunha; Trent R Northen; Jay D Keasling
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-13       Impact factor: 15.336

Review 2.  Activity-based proteomic and metabolomic approaches for understanding metabolism.

Authors:  Devon Hunerdosse; Daniel K Nomura
Journal:  Curr Opin Biotechnol       Date:  2014-03-13       Impact factor: 9.740

3.  macroMS: Image-Guided Analysis of Random Objects by Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry.

Authors:  Kisurb Choe; Pu Xue; Huimin Zhao; Jonathan V Sweedler
Journal:  J Am Soc Mass Spectrom       Date:  2021-04-06       Impact factor: 3.109

4.  Phylogenomically guided identification of industrially relevant GH1 β-glucosidases through DNA synthesis and nanostructure-initiator mass spectrometry.

Authors:  Richard A Heins; Xiaoliang Cheng; Sangeeta Nath; Kai Deng; Benjamin P Bowen; Dylan C Chivian; Supratim Datta; Gregory D Friedland; Patrik D'Haeseleer; Dongying Wu; Mary Tran-Gyamfi; Chessa S Scullin; Seema Singh; Weibing Shi; Matthew G Hamilton; Matthew L Bendall; Alexander Sczyrba; John Thompson; Taya Feldman; Joel M Guenther; John M Gladden; Jan-Fang Cheng; Paul D Adams; Edward M Rubin; Blake A Simmons; Kenneth L Sale; Trent R Northen; Samuel Deutsch
Journal:  ACS Chem Biol       Date:  2014-07-17       Impact factor: 5.100

5.  Toward a Predictive Understanding of Earth's Microbiomes to Address 21st Century Challenges.

Authors:  Martin J Blaser; Zoe G Cardon; Mildred K Cho; Jeffrey L Dangl; Timothy J Donohue; Jessica L Green; Rob Knight; Mary E Maxon; Trent R Northen; Katherine S Pollard; Eoin L Brodie
Journal:  mBio       Date:  2016-05-13       Impact factor: 7.867

6.  Profiling of Microbial Colonies for High-Throughput Engineering of Multistep Enzymatic Reactions via Optically Guided Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.

Authors:  Tong Si; Bin Li; Troy J Comi; Yuwei Wu; Pingfan Hu; Yuying Wu; Yuhao Min; Douglas A Mitchell; Huimin Zhao; Jonathan V Sweedler
Journal:  J Am Chem Soc       Date:  2017-08-30       Impact factor: 15.419

7.  Rapid characterization of the activities of lignin-modifying enzymes based on nanostructure-initiator mass spectrometry (NIMS).

Authors:  Kai Deng; Jijiao Zeng; Gang Cheng; Jian Gao; Kenneth L Sale; Blake A Simmons; Anup K Singh; Paul D Adams; Trent R Northen
Journal:  Biotechnol Biofuels       Date:  2018-09-27       Impact factor: 6.040

8.  Versatile synthesis of probes for high-throughput enzyme activity screening.

Authors:  Tristan de Rond; Pamela Peralta-Yahya; Xiaoliang Cheng; Trent R Northen; Jay D Keasling
Journal:  Anal Bioanal Chem       Date:  2013-04-10       Impact factor: 4.142

9.  Development of a High Throughput Platform for Screening Glycoside Hydrolases Based on Oxime-NIMS.

Authors:  Kai Deng; Joel M Guenther; Jian Gao; Benjamin P Bowen; Huu Tran; Vimalier Reyes-Ortiz; Xiaoliang Cheng; Noppadon Sathitsuksanoh; Richard Heins; Taichi E Takasuka; Lai F Bergeman; Henrik Geertz-Hansen; Samuel Deutsch; Dominique Loqué; Kenneth L Sale; Blake A Simmons; Paul D Adams; Anup K Singh; Brian G Fox; Trent R Northen
Journal:  Front Bioeng Biotechnol       Date:  2015-10-13

10.  High throughput nanostructure-initiator mass spectrometry screening of microbial growth conditions for maximal β-glucosidase production.

Authors:  Xiaoliang Cheng; Jennifer Hiras; Kai Deng; Benjamin Bowen; Blake A Simmons; Paul D Adams; Steven W Singer; Trent R Northen
Journal:  Front Microbiol       Date:  2013-12-06       Impact factor: 5.640

  10 in total

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