Literature DB >> 22398613

BLUEPRINT to decode the epigenetic signature written in blood.

David Adams, Lucia Altucci, Stylianos E Antonarakis, Juan Ballesteros, Stephan Beck, Adrian Bird, Christoph Bock, Bernhard Boehm, Elias Campo, Andrea Caricasole, Fredrik Dahl, Emmanouil T Dermitzakis, Tariq Enver, Manel Esteller, Xavier Estivill, Anne Ferguson-Smith, Jude Fitzgibbon, Paul Flicek, Claudia Giehl, Thomas Graf, Frank Grosveld, Roderic Guigo, Ivo Gut, Kristian Helin, Jonas Jarvius, Ralf Küppers, Hans Lehrach, Thomas Lengauer, Åke Lernmark, David Leslie, Markus Loeffler, Elizabeth Macintyre, Antonello Mai, Joost H A Martens, Saverio Minucci, Willem H Ouwehand, Pier Giuseppe Pelicci, Hèléne Pendeville, Bo Porse, Vardhman Rakyan, Wolf Reik, Martin Schrappe, Dirk Schübeler, Martin Seifert, Reiner Siebert, David Simmons, Nicole Soranzo, Salvatore Spicuglia, Michael Stratton, Hendrik G Stunnenberg, Amos Tanay, David Torrents, Alfonso Valencia, Edo Vellenga, Martin Vingron, Jörn Walter, Spike Willcocks.   

Abstract

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Year:  2012        PMID： 22398613     DOI： 10.1038/nbt.2153

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  3 in total

1.  Cancer-gene testing ramps up.

Authors:  Ewen Callaway
Journal:  Nature       Date:  2010-10-14       Impact factor: 49.962

2.  Chemoproteomics profiling of HDAC inhibitors reveals selective targeting of HDAC complexes.

Authors:  Marcus Bantscheff; Carsten Hopf; Mikhail M Savitski; Antje Dittmann; Paola Grandi; Anne-Marie Michon; Judith Schlegl; Yann Abraham; Isabelle Becher; Giovanna Bergamini; Markus Boesche; Manja Delling; Birgit Dümpelfeld; Dirk Eberhard; Carola Huthmacher; Toby Mathieson; Daniel Poeckel; Valérie Reader; Katja Strunk; Gavain Sweetman; Ulrich Kruse; Gitte Neubauer; Nigel G Ramsden; Gerard Drewes
Journal:  Nat Biotechnol       Date:  2011-01-23       Impact factor: 54.908

3.  Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis.

Authors:  Vardhman K Rakyan; Huriya Beyan; Thomas A Down; Mohammed I Hawa; Siarhei Maslau; Deeqo Aden; Antoine Daunay; Florence Busato; Charles A Mein; Burkhard Manfras; Kerith-Rae M Dias; Christopher G Bell; Jörg Tost; Bernhard O Boehm; Stephan Beck; R David Leslie
Journal:  PLoS Genet       Date:  2011-09-29       Impact factor: 5.917
  3 in total
  175 in total

Review 1.  Making the case for chromatin profiling: a new tool to investigate the immune-regulatory landscape.

Authors:  Deborah R Winter; Steffen Jung; Ido Amit
Journal:  Nat Rev Immunol       Date:  2015-08-14       Impact factor: 53.106

2.  Genome-wide Association Study of Platelet Count Identifies Ancestry-Specific Loci in Hispanic/Latino Americans.

Authors:  Ursula M Schick; Deepti Jain; Chani J Hodonsky; Jean V Morrison; James P Davis; Lisa Brown; Tamar Sofer; Matthew P Conomos; Claudia Schurmann; Caitlin P McHugh; Sarah C Nelson; Swarooparani Vadlamudi; Adrienne Stilp; Anna Plantinga; Leslie Baier; Stephanie A Bien; Stephanie M Gogarten; Cecelia A Laurie; Kent D Taylor; Yongmei Liu; Paul L Auer; Nora Franceschini; Adam Szpiro; Ken Rice; Kathleen F Kerr; Jerome I Rotter; Robert L Hanson; George Papanicolaou; Stephen S Rich; Ruth J F Loos; Brian L Browning; Sharon R Browning; Bruce S Weir; Cathy C Laurie; Karen L Mohlke; Kari E North; Timothy A Thornton; Alex P Reiner
Journal:  Am J Hum Genet       Date:  2016-01-21       Impact factor: 11.025

3.  Improving reference epigenome catalogs by computational prediction.

Authors:  Peter Ebert; Christoph Bock
Journal:  Nat Biotechnol       Date:  2015-04       Impact factor: 54.908

Review 4.  Characterising the epigenome as a key component of the fetal exposome in evaluating in utero exposures and childhood cancer risk.

Authors:  Akram Ghantous; Hector Hernandez-Vargas; Graham Byrnes; Terence Dwyer; Zdenko Herceg
Journal:  Mutagenesis       Date:  2015-02-26       Impact factor: 3.000

5.  BLUEPRINT: mapping human blood cell epigenomes.

Authors:  Joost H A Martens; Hendrik G Stunnenberg
Journal:  Haematologica       Date:  2013-10       Impact factor: 9.941

Review 6.  Recommendations for the design and analysis of epigenome-wide association studies.

Authors:  Karin B Michels; Alexandra M Binder; Sarah Dedeurwaerder; Charles B Epstein; John M Greally; Ivo Gut; E Andres Houseman; Benedetta Izzi; Karl T Kelsey; Alexander Meissner; Aleksandar Milosavljevic; Kimberly D Siegmund; Christoph Bock; Rafael A Irizarry
Journal:  Nat Methods       Date:  2013-10       Impact factor: 28.547

Review 7.  Using chromatin marks to interpret and localize genetic associations to complex human traits and diseases.

Authors:  Gosia Trynka; Soumya Raychaudhuri
Journal:  Curr Opin Genet Dev       Date:  2013-11-25       Impact factor: 5.578

8.  Cell Type-Specific Intralocus Interactions Reveal Oligodendrocyte Mechanisms in MS.

Authors:  Daniel C Factor; Anna M Barbeau; Kevin C Allan; Lucille R Hu; Mayur Madhavan; An T Hoang; Kathryn E A Hazel; Parker A Hall; Sagar Nisraiyya; Fadi J Najm; Tyler E Miller; Zachary S Nevin; Robert T Karl; Bruna R Lima; Yanwei Song; Alexandra G Sibert; Gursimran K Dhillon; Christina Volsko; Cynthia F Bartels; Drew J Adams; Ranjan Dutta; Michael D Gallagher; William Phu; Alexey Kozlenkov; Stella Dracheva; Peter C Scacheri; Paul J Tesar; Olivia Corradin
Journal:  Cell       Date:  2020-04-03       Impact factor: 41.582

9.  The tissue is the issue: improved methylome analysis from paraffin-embedded tissues by application of the HOPE technique.

Authors:  Sebastian Marwitz; Julia Kolarova; Martin Reck; Niels Reinmuth; Christian Kugler; Ines Schädlich; Andrea Haake; Peter Zabel; Ekkehard Vollmer; Reiner Siebert; Torsten Goldmann; Ole Ammerpohl
Journal:  Lab Invest       Date:  2014-06-16       Impact factor: 5.662

10.  Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues.

Authors:  Gilad Landan; Netta Mendelson Cohen; Zohar Mukamel; Amir Bar; Alina Molchadsky; Ran Brosh; Shirley Horn-Saban; Daniela Amann Zalcenstein; Naomi Goldfinger; Adi Zundelevich; Einav Nili Gal-Yam; Varda Rotter; Amos Tanay
Journal:  Nat Genet       Date:  2012-10-14       Impact factor: 38.330
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