Literature DB >> 22397471

Temporal and spatial profiling of internode elongation-associated protein expression in rapidly growing culms of bamboo.

Kai Cui1, Cai-yun He, Jian-guo Zhang, Ai-guo Duan, Yan-fei Zeng.   

Abstract

In natural conditions, culms of developing Moso bamboo, Phyllostachys heterocycla var. pubescens, reach their final height of more than ten meters within a short period of two to four months. To study this phenomenon, bamboo culm material collected from different developmental stages and internodes was analyzed. Histological observations indicated that the development of culm was dominated by cell division in the initial stages and by cell elongation in the middle and late stages. Development, maturation, and aging in different regions of the culm were studied systematically from the basal to the top internode. The four major endogenous hormones, indole acetic acid, gibberellic acid, zeatin riboside, and abscisic acid appeared to strongly influence the cell elongation phase. A total of 258 spots were differentially expressed in culm development. Of these, 213 spots were identified by MALDI-TOF/TOF MS and were involved in many physiological and metabolic processes including carbohydrate metabolism, cell division, cell expansion, protein synthesis, amino acid metabolism and redox homeostasis. These proteins with different expression patterns constructed an ingenious network to regulate the culm development. Developmental stage-specific and internode-specific protein expression patterns were identified. Protein abundance was regulated temporally and to some extent spatially, and the sequential development from base to apex of bamboo culm was implemented by temporal and spatial expression of enzymes. Results indicate that during development energy was mainly derived from sucrose degradation, as photosynthetic capacity was poor. The regulation of anaerobic and aerobic modes of respiration appeared to play an important role in energy generation. This is the first report on proteomic profiling in bamboo and helps in understanding the regulatory processes in developing culms.

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Year:  2012        PMID: 22397471     DOI: 10.1021/pr2011878

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  33 in total

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Journal:  Nat Genet       Date:  2013-02-24       Impact factor: 38.330

2.  Genome-wide analysis of shoot growth-associated alternative splicing in moso bamboo.

Authors:  Long Li; Tao Hu; Xueping Li; Shaohua Mu; Zhanchao Cheng; Wei Ge; Jian Gao
Journal:  Mol Genet Genomics       Date:  2016-05-11       Impact factor: 3.291

3.  The roles of Aux/IAA gene family in development of Dendrocalamus sinicus (Poaceae: Bambusoideae) inferred by comprehensive analysis and expression profiling.

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Journal:  Mol Biol Rep       Date:  2019-01-28       Impact factor: 2.316

4.  Comparative Analyses of Anatomical Structure, Phytohormone Levels, and Gene Expression Profiles Reveal Potential Dwarfing Mechanisms in Shengyin Bamboo (Phyllostachys edulis f. tubaeformis).

Authors:  Tao Wang; Lei Liu; Xiaojing Wang; Lixiong Liang; Jinjun Yue; Lubin Li
Journal:  Int J Mol Sci       Date:  2018-06-07       Impact factor: 5.923

5.  A new outlook on sporadic flowering of bamboo.

Authors:  Rico Gamuyao; Keisuke Nagai; Motoyuki Ashikari; Stefan Reuscher
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6.  Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos.

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Journal:  Planta       Date:  2022-08-01       Impact factor: 4.540

7.  Genome-wide identification and characterization of aquaporin gene family in moso bamboo (Phyllostachys edulis).

Authors:  Huayu Sun; Lichao Li; Yongfeng Lou; Hansheng Zhao; Zhimin Gao
Journal:  Mol Biol Rep       Date:  2016-03-19       Impact factor: 2.316

8.  Characterization and primary functional analysis of a bamboo NAC gene targeted by miR164b.

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Journal:  Plant Cell Rep       Date:  2016-03-28       Impact factor: 4.570

9.  Transcriptome sequencing and de novo analysis for Ma bamboo (Dendrocalamus latiflorus Munro) using the Illumina platform.

Authors:  Mingying Liu; Guirong Qiao; Jing Jiang; Huiqin Yang; Lihua Xie; Jinzhong Xie; Renying Zhuo
Journal:  PLoS One       Date:  2012-10-03       Impact factor: 3.240

10.  PSBR1, encoding a mitochondrial protein, is regulated by brassinosteroid in moso bamboo (Phyllostachys edulis).

Authors:  Zejun Guo; Zhe Zhang; Xuelian Yang; Kuixing Yin; Yitao Chen; Zhenzhen Zhang; Kihye Shin; Qiang Zhu; Zhi-Yong Wang; Wenfei Wang
Journal:  Plant Mol Biol       Date:  2020-02-10       Impact factor: 4.076

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