Literature DB >> 27021381

Characterization and primary functional analysis of a bamboo NAC gene targeted by miR164b.

Lili Wang1,2, Hansheng Zhao1, Dongliang Chen1,3, Lichao Li1, Huayu Sun1, Yongfeng Lou1, Zhimin Gao4.   

Abstract

KEY MESSAGE: PeSNAC1 , a stress-related NAC1 from Phyllostachys edulis , was characterized. Ectopic expression in Arabidopsis indicated that PeSNAC1 together with ped -miR164b participated in the regulation of organ boundaries and stress tolerance. NAC (NAM, ATAF1/2 and CUC2) participates in many different processes regulating plant growth, development, and stress response. A total of 125 NAC genes have been predicted in moso bamboo (Phyllostachys edulis), but their roles are poorly understood. PeSNAC1 targeted by ped-miR164b was focused for further study. The cleavage of PeSNAC1 mRNA guided by ped-miR164b was validated using RLM-5' RACE. Tissue-specific expression analysis demonstrated that ped-miR164b had a declining trend from root, sheath, leaf, to that of stem, which was opposite to that of PeSNAC1. Transgenic Arabidopsis plants overexpressing either PeSNAC1 (OX-PeSNAC1) or, ped-miR164b (OX-ped-miR164b) driven by the CaMV35S promoter were generated. OX-ped-miR164b plants showed similar phenotype of cuc2 mutants whose growth was seriously suppressed. Compared with Col-0, sense OX-PeSNAC1 plants grew rapidly and flowered earlier, whereas antisense plants grew slowly and exhibited delayed flowering. Sense OX-PeSNAC1 plants had the greatest number of lateral roots, while antisense OX-PeSNAC1 and OX-ped-miR164b plants had fewer lateral roots than Col-0. Under NaCl and PEG6000 stresses, survival rates were higher and F v/F m values declined more slowly in sense OX-PeSNAC1 plants than in Col-0, with lower survival rates and a more rapid decrease in F v/F m values conversely observed in antisense OX-PeSNAC1 and OX-ped-miR164b plants. These findings indicated that ped-miR164b-targeted PeSNAC1 may play key roles in plant development and tolerance to salinity and drought stresses.

Entities:  

Keywords:  Bamboo; F v/F m; Lateral root; NAC; NaCl and drought stresses; RLM-5′ RACE; miR164b; qRT-PCR

Mesh:

Substances:

Year:  2016        PMID: 27021381     DOI: 10.1007/s00299-016-1970-6

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  44 in total

Review 1.  Chlorophyll fluorescence--a practical guide.

Authors:  K Maxwell; G N Johnson
Journal:  J Exp Bot       Date:  2000-04       Impact factor: 6.992

2.  The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla).

Authors:  Zhenhua Peng; Ying Lu; Lubin Li; Qiang Zhao; Qi Feng; Zhimin Gao; Hengyun Lu; Tao Hu; Na Yao; Kunyan Liu; Yan Li; Danlin Fan; Yunli Guo; Wenjun Li; Yiqi Lu; Qijun Weng; CongCong Zhou; Lei Zhang; Tao Huang; Yan Zhao; Chuanrang Zhu; Xinge Liu; Xuewen Yang; Tao Wang; Kun Miao; Caiyun Zhuang; Xiaolu Cao; Wenli Tang; Guanshui Liu; Yingli Liu; Jie Chen; Zhenjing Liu; Licai Yuan; Zhenhua Liu; Xuehui Huang; Tingting Lu; Benhua Fei; Zemin Ning; Bin Han; Zehui Jiang
Journal:  Nat Genet       Date:  2013-02-24       Impact factor: 38.330

3.  Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.

Authors:  Dong-Hoon Jeong; Sunhee Park; Jixian Zhai; Sai Guna Ranjan Gurazada; Emanuele De Paoli; Blake C Meyers; Pamela J Green
Journal:  Plant Cell       Date:  2011-12-09       Impact factor: 11.277

4.  MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development.

Authors:  Hui-Shan Guo; Qi Xie; Ji-Feng Fei; Nam-Hai Chua
Journal:  Plant Cell       Date:  2005-04-13       Impact factor: 11.277

5.  Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa).

Authors:  Yanfei Ding; Zhen Chen; Cheng Zhu
Journal:  J Exp Bot       Date:  2011-03-01       Impact factor: 6.992

6.  Real-time quantification of microRNAs by stem-loop RT-PCR.

Authors:  Caifu Chen; Dana A Ridzon; Adam J Broomer; Zhaohui Zhou; Danny H Lee; Julie T Nguyen; Maura Barbisin; Nan Lan Xu; Vikram R Mahuvakar; Mark R Andersen; Kai Qin Lao; Kenneth J Livak; Karl J Guegler
Journal:  Nucleic Acids Res       Date:  2005-11-27       Impact factor: 16.971

7.  miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner.

Authors:  Jian Bo Song; Shuai Gao; Di Sun; Hua Li; Xia Xia Shu; Zhi Min Yang
Journal:  BMC Plant Biol       Date:  2013-12-11       Impact factor: 4.215

8.  Molecular Characterization and Expression Profiling of NAC Transcription Factors in Brachypodium distachyon L.

Authors:  Gengrui Zhu; Guanxing Chen; Jiantang Zhu; Yan Zhu; Xiaobing Lu; Xiaohui Li; Yingkao Hu; Yueming Yan
Journal:  PLoS One       Date:  2015-10-07       Impact factor: 3.240

9.  TaNAC29, a NAC transcription factor from wheat, enhances salt and drought tolerance in transgenic Arabidopsis.

Authors:  Quanjun Huang; Yan Wang; Bin Li; Junli Chang; Mingjie Chen; Kexiu Li; Guangxiao Yang; Guangyuan He
Journal:  BMC Plant Biol       Date:  2015-11-04       Impact factor: 4.215

10.  Next-generation sequencing-based mRNA and microRNA expression profiling analysis revealed pathways involved in the rapid growth of developing culms in Moso bamboo.

Authors:  Cai-yun He; Kai Cui; Jian-guo Zhang; Ai-guo Duan; Yan-fei Zeng
Journal:  BMC Plant Biol       Date:  2013-08-21       Impact factor: 4.215

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  7 in total

1.  A NAC Transcription Factor Represses Putrescine Biosynthesis and Affects Drought Tolerance.

Authors:  Hao Wu; Bing Fu; Peipei Sun; Chang Xiao; Ji-Hong Liu
Journal:  Plant Physiol       Date:  2016-09-23       Impact factor: 8.340

2.  Small RNA and Transcriptome Sequencing Reveal a Potential miRNA-Mediated Interaction Network That Functions during Somatic Embryogenesis in Lilium pumilum DC. Fisch.

Authors:  Jing Zhang; Bingyang Xue; Meizhu Gai; Shengli Song; Nana Jia; Hongmei Sun
Journal:  Front Plant Sci       Date:  2017-04-20       Impact factor: 5.753

3.  Genome-wide identification of growth-regulating factors in moso bamboo (Phyllostachys edulis): in silico and experimental analyses.

Authors:  Yanan Shi; Huanlong Liu; Yameng Gao; Yujiao Wang; Min Wu; Yan Xiang
Journal:  PeerJ       Date:  2019-09-12       Impact factor: 2.984

4.  The peu-miR160a-PeARF17.1/PeARF17.2 module participates in the adventitious root development of poplar.

Authors:  Sian Liu; Chunxia Yang; Ling Wu; Heng Cai; Huogen Li; Meng Xu
Journal:  Plant Biotechnol J       Date:  2019-08-03       Impact factor: 9.803

5.  Genome-Wide Investigation of the NAC Gene Family and Its Potential Association with the Secondary Cell Wall in Moso Bamboo.

Authors:  Xuemeng Shan; Kebin Yang; Xiurong Xu; Chenglei Zhu; Zhimin Gao
Journal:  Biomolecules       Date:  2019-10-14

6.  Overexpression of PheNAC3 from moso bamboo promotes leaf senescence and enhances abiotic stress tolerance in Arabidopsis.

Authors:  Lihua Xie; Miaomiao Cai; Xiangyu Li; Huifang Zheng; Yali Xie; Zhanchao Cheng; Yucong Bai; Juan Li; Shaohua Mu; Jian Gao
Journal:  PeerJ       Date:  2020-03-31       Impact factor: 2.984

7.  A regulatory network driving shoot lignification in rapidly growing bamboo.

Authors:  Kebin Yang; Lichao Li; Yongfeng Lou; Chenglei Zhu; Xueping Li; Zhimin Gao
Journal:  Plant Physiol       Date:  2021-10-05       Impact factor: 8.340

  7 in total

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