Literature DB >> 22396478

Microdeletion and microduplication syndromes.

Anja Weise1, Kristin Mrasek, Elisabeth Klein, Milene Mulatinho, Juan C Llerena, David Hardekopf, Sona Pekova, Samarth Bhatt, Nadezda Kosyakova, Thomas Liehr.   

Abstract

The widespread use of whole genome analysis based on array comparative genomic hybridization in diagnostics and research has led to a continuously growing number of microdeletion and microduplication syndromes (MMSs) connected to certain phenotypes. These MMSs also include increasing instances in which the critical region can be reciprocally deleted or duplicated. This review catalogues the currently known MMSs and the corresponding critical regions including phenotypic consequences. Besides the pathogenic pathways leading to such rearrangements, the different detection methods and their limitations are discussed. Finally, the databases available for distinguishing between reported benign or pathogenic copy number alterations are highlighted. Overall, a review of MMSs that previously were also denoted "genomic disorders" or "contiguous gene syndromes" is given.

Mesh:

Year:  2012        PMID: 22396478      PMCID: PMC3351230          DOI: 10.1369/0022155412440001

Source DB:  PubMed          Journal:  J Histochem Cytochem        ISSN: 0022-1554            Impact factor:   2.479


  30 in total

Review 1.  The mechanism of human nonhomologous DNA end joining.

Authors:  Michael R Lieber
Journal:  J Biol Chem       Date:  2007-11-12       Impact factor: 5.157

2.  Parental-origin-determination fluorescence in situ hybridization distinguishes homologous human chromosomes on a single-cell level.

Authors:  A Weise; M Gross; K Mrasek; H Mkrtchyan; B Horsthemke; C Jonsrud; F Von Eggeling; S Hinreiner; V Witthuhn; U Claussen; T Liehr
Journal:  Int J Mol Med       Date:  2008-02       Impact factor: 4.101

3.  A recurrent 14q32.2 microdeletion mediated by expanded TGG repeats.

Authors:  Frédérique Béna; Stefania Gimelli; Eugenia Migliavacca; Nathalie Brun-Druc; Karin Buiting; Stylianos E Antonarakis; Andrew J Sharp
Journal:  Hum Mol Genet       Date:  2010-02-23       Impact factor: 6.150

4.  3q29 microdeletion syndrome: clinical and molecular characterization of a new syndrome.

Authors:  Lionel Willatt; James Cox; John Barber; Elisabet Dachs Cabanas; Amanda Collins; Dian Donnai; David R FitzPatrick; Eddy Maher; Howard Martin; Josep Parnau; Lesley Pindar; Jacqueline Ramsay; Charles Shaw-Smith; Erik A Sistermans; Michael Tettenborn; Dorothy Trump; Bert B A de Vries; Kate Walker; F Lucy Raymond
Journal:  Am J Hum Genet       Date:  2005-05-25       Impact factor: 11.025

5.  High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays.

Authors:  D Pinkel; R Segraves; D Sudar; S Clark; I Poole; D Kowbel; C Collins; W L Kuo; C Chen; Y Zhai; S H Dairkee; B M Ljung; J W Gray; D G Albertson
Journal:  Nat Genet       Date:  1998-10       Impact factor: 38.330

6.  A method for accurate detection of genomic microdeletions using real-time quantitative PCR.

Authors:  Rosanna Weksberg; Simon Hughes; Laura Moldovan; Anne S Bassett; Eva W C Chow; Jeremy A Squire
Journal:  BMC Genomics       Date:  2005-12-13       Impact factor: 3.969

Review 7.  The evolution of human segmental duplications and the core duplicon hypothesis.

Authors:  T Marques-Bonet; E E Eichler
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2009-08-28

8.  Genomic inversions of human chromosome 15q11-q13 in mothers of Angelman syndrome patients with class II (BP2/3) deletions.

Authors:  Giorgio Gimelli; Miguel Angel Pujana; Maria Grazia Patricelli; Silvia Russo; Daniela Giardino; Lidia Larizza; Joseph Cheung; Lluís Armengol; Albert Schinzel; Xavier Estivill; Orsetta Zuffardi
Journal:  Hum Mol Genet       Date:  2003-04-15       Impact factor: 6.150

9.  Mapping and sequencing of structural variation from eight human genomes.

Authors:  Jeffrey M Kidd; Gregory M Cooper; William F Donahue; Hillary S Hayden; Nick Sampas; Tina Graves; Nancy Hansen; Brian Teague; Can Alkan; Francesca Antonacci; Eric Haugen; Troy Zerr; N Alice Yamada; Peter Tsang; Tera L Newman; Eray Tüzün; Ze Cheng; Heather M Ebling; Nadeem Tusneem; Robert David; Will Gillett; Karen A Phelps; Molly Weaver; David Saranga; Adrianne Brand; Wei Tao; Erik Gustafson; Kevin McKernan; Lin Chen; Maika Malig; Joshua D Smith; Joshua M Korn; Steven A McCarroll; David A Altshuler; Daniel A Peiffer; Michael Dorschner; John Stamatoyannopoulos; David Schwartz; Deborah A Nickerson; James C Mullikin; Richard K Wilson; Laurakay Bruhn; Maynard V Olson; Rajinder Kaul; Douglas R Smith; Evan E Eichler
Journal:  Nature       Date:  2008-05-01       Impact factor: 49.962

10.  Mechanisms for human genomic rearrangements.

Authors:  Wenli Gu; Feng Zhang; James R Lupski
Journal:  Pathogenetics       Date:  2008-11-03
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  52 in total

1.  Identification of an atypical microdeletion generating the RNF135-SUZ12 chimeric gene and causing a position effect in an NF1 patient with overgrowth.

Authors:  Luca Ferrari; Giulietta Scuvera; Arianna Tucci; Donatella Bianchessi; Francesco Rusconi; Francesca Menni; Elena Battaglioli; Donatella Milani; Paola Riva
Journal:  Hum Genet       Date:  2017-08-03       Impact factor: 4.132

2.  Alpha-fetoprotein and its value for predicting pregnancy outcomes - a re-evaluation.

Authors:  Ayham Alhaj Darouich; Thomas Liehr; Anja Weise; Dietmar Schlembach; Ekkehart Schleußner; Michael Kiehntopf; Isolde Schreyer
Journal:  J Prenat Med       Date:  2015 Jul-Dec

3.  Genetic effects of a 13q31.1 microdeletion detected by noninvasive prenatal testing (NIPT).

Authors:  Yifang Jia; Heyong Zhao; Donghong Shi; Wen Peng; Luwen Xie; Wei Wang; Fuman Jiang; Hongyun Zhang; Xietong Wang
Journal:  Int J Clin Exp Pathol       Date:  2014-09-15

Review 4.  Array comparative genomic hybridization and genomic sequencing in the diagnostics of the causes of congenital anomalies.

Authors:  Krzysztof Szczałuba; Urszula Demkow
Journal:  J Appl Genet       Date:  2016-11-18       Impact factor: 3.240

5.  [Clinical phenotypes and copy number variations in children with microdeletion and microduplication syndromes: an analysis of 50 cases].

Authors:  Li-Na Zhang; Zhe Meng; Zhan-Wen He; Dong-Fang Li; Xiang-Yang Luo; Li-Yang Liang
Journal:  Zhongguo Dang Dai Er Ke Za Zhi       Date:  2016-09

6.  Implementation of chromosomal microarrays in a cohort of patients with intellectual disability at the Argentinean public health system.

Authors:  Lucía Daniela Espeche; Andrea Paula Solari; María Ángeles Mori; Rubén Martín Arenas; María Palomares; Myriam Pérez; Cinthia Martínez; Vanesa Lotersztein; Mabel Segovia; Romina Armando; Liliana Beatriz Dain; Julián Nevado; Pablo Lapunzina; Sandra Rozental
Journal:  Mol Biol Rep       Date:  2020-09-13       Impact factor: 2.316

7.  A De Novo Xp11.23 Duplication in a Girl with a Severe Phenotype: Expanding the Clinical Spectrum.

Authors:  Pinar Arican; Dilek Cavusoglu; Pinar Gencpinar; Berk Ozyilmaz; Taha Resid Ozdemir; Nihal Olgac Dundar
Journal:  J Pediatr Genet       Date:  2017-12-18

8.  A de novo POU3F3 Deletion in a Boy with Intellectual Disability and Dysmorphic Features.

Authors:  A Dheedene; M Maes; S Vergult; B Menten
Journal:  Mol Syndromol       Date:  2013-11-02

9.  Dissecting the genotype in syndromic intellectual disability using whole exome sequencing in addition to genome-wide copy number analysis.

Authors:  Carl Friedrich Classen; Vera Riehmer; Christina Landwehr; Anne Kosfeld; Stefanie Heilmann; Caroline Scholz; Sarah Kabisch; Hartmut Engels; Sascha Tierling; Miroslav Zivicnjak; Frank Schacherer; Dieter Haffner; Ruthild G Weber
Journal:  Hum Genet       Date:  2013-04-04       Impact factor: 4.132

10.  Reciprocal deletion and duplication at 2q23.1 indicates a role for MBD5 in autism spectrum disorder.

Authors:  Sureni V Mullegama; Jill A Rosenfeld; Carmen Orellana; Bregje W M van Bon; Sara Halbach; Elena A Repnikova; Lauren Brick; Chumei Li; Lucie Dupuis; Monica Rosello; Swaroop Aradhya; D James Stavropoulos; Kandamurugu Manickam; Elyse Mitchell; Jennelle C Hodge; Michael E Talkowski; James F Gusella; Kory Keller; Jonathan Zonana; Stuart Schwartz; Robert E Pyatt; Darrel J Waggoner; Lisa G Shaffer; Angela E Lin; Bert B A de Vries; Roberto Mendoza-Londono; Sarah H Elsea
Journal:  Eur J Hum Genet       Date:  2013-05-01       Impact factor: 4.246

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