| Literature DB >> 22389742 |
Tália S Machado de Assis1, Ana Rabello, Guilherme L Werneck.
Abstract
BACKGROUND AND OBJECTIVES: In Brazil, as in many other affected countries, a large proportion of visceral leishmaniasis (VL) occurs in remote locations and treatment is often performed on basis of clinical suspicion. This study aimed at developing predictive models to help with the clinical management of VL in patients with suggestive clinical of disease.Entities:
Mesh:
Year: 2012 PMID: 22389742 PMCID: PMC3289607 DOI: 10.1371/journal.pntd.0001542
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Clinical and laboratory characteristics of VL and non-VL cases, among 213 patients with clinical suspicion of VL in test sample.
| Clinical and laboratory characteristics | VL cases | Non- LV cases | OR | 95% CI | p value | ||
| N | % | N | % | ||||
| Age (years) | Continuous | 0.9 | 0.96–0.99 | 0.001 | |||
| Sex | |||||||
| Female | 88 | 62.9 | 44 | 60.3 | 1.0 | ||
| Male | 52 | 37.1 | 29 | 39.7 | 0.9 | 0.50–1.60 | 0.70 |
| Weight loss | |||||||
| Yes | 115 | 87.8 | 51 | 78.5 | 2.0 | 0.90–4.34 | 0.09 |
| No | 16 | 12.2 | 14 | 21.5 | 1.0 | ||
| Cough | |||||||
| Yes | 48 | 35.6 | 35 | 52.2 | 0.5 | 0.28–0.91 | 0.02 |
| No | 87 | 64.4 | 32 | 47.8 | 1.0 | ||
| Diarrhea | |||||||
| Yes | 34 | 25.4 | 19 | 28.4 | 0.9 | 0.44–1.70 | 0.6 |
| No | 100 | 74.6 | 48 | 71.6 | 1.0 | ||
| Jaundice | |||||||
| Yes | 19 | 14.3 | 21 | 30.4 | 0.4 | 0.19–0.77 | 0.01 |
| No | 114 | 85.7 | 48 | 69.6 | 1.0 | ||
| Bleeding | |||||||
| Yes | 13 | 9.8 | 15 | 22.7 | 0.4 | 0.16–0.83 | 0.02 |
| No | 120 | 90.2 | 51 | 77.3 | 1.0 | - | - |
| Splenomegaly | |||||||
| Yes | 127 | 90.7 | 36 | 49.3 | 10.0 | 4.83–21.0 | <0.001 |
| No | 13 | 9.3 | 37 | 50.7 | 1.0 | - | - |
| Hepatomegaly | |||||||
| Yes | 95 | 67.9 | 32 | 43.8 | 2.7 | 1.51–4.84 | 0.001 |
| No | 45 | 32.1 | 41 | 56.2 | 1.0 | - | - |
| Leukopenia | |||||||
| Yes | 99 | 74.4 | 30 | 42.3 | 4.0 | 2.16–7.33 | <0.001 |
| No | 34 | 25.6 | 41 | 57.7 | 1.0 | - | - |
| Plaquetopeny | |||||||
| Yes | 81 | 72.3 | 34 | 50.8 | 2.5 | 1.35–4.78 | 0.004 |
| No | 31 | 27.7 | 33 | 49.2 | 1.0 | - | - |
Variables significantly associated with visceral leishmaniasis in multiple logistic regression, clinical-laboratory (final model).
| Variable | OR | 95% CI | p value |
| Splenomegaly | |||
| Yes | 17.0 | 6.0–47.4 | 0.00 |
| No | 1.00 | ||
| Leukopenia | |||
| Yes | 4.5 | 2.0–10.4 | 0.00 |
| No | 1.00 | ||
| Cough | |||
| Yes | 0.37 | 0.16–0.84 | 0.02 |
| No | 1.00 |
Predictive performance of different multivariate models in multiple logistic regression.
| Models | Variation points | Score cut-off point | Sensitivity (%) (95% CI) | Specificity (%) (95% CI) | Area under ROC Curve (%) (95% CI) | Positive predictive value (%) (95% CI) |
| 1. Clinical-laboratory | (−1/4) | ≥3 | 81.4 (74.0–88.0) | 65.2 (52.4–76.5) | 79.4 (72.0–87.0) | 82.0 (74.3–88.3) |
| 2. Clinical-laboratory | 91.5 (82.5–97.0) | 53.0 (35.5–70.0) | 74.0 (61.3–86.3) | 79.3 (69.0–87.4) | ||
| 1. Clinical-laboratory | (−1/8) | ≥5 | 91.5 (85.3–96.0) | 80.3 (69.0–89.1) | 93.1 (89.5–97.0) | 90.1 (84.0–95.0) |
| 2. Clinical-laboratory | 90.1 (81.0–96.0) | 89.0 (74.0–97.0) | 91.0 (85.0–97.3) | 94.1 (86.0–98.4) | ||
| 1. Clinical-laboratory | (−1/7) | ≥4 | 90.0 (83.4–94.5) | 77.3 (65.3–87.0) | 90.4 (86.0–95.0) | 88.5 (82.0–93.4) |
| 2. Clinical-laboratory | 99.0 (92.4–100) | 78.0 (61.0–90.0) | 95.0 (89.0–100) | 90.0 (81.0–95.5) | ||
| 1. Clinical-laboratory | (−1/10) | ≥7 | 98.0 (93.4–99.5) | 88.0 (77.5–95.0) | 97.0 (94.1–100) | 94.0 (89.0–97.4) |
| 2. Clinical-laboratory | 96.0 (88.1–99.1) | 89.0 (74.0–97.0) | 93.4 (87.0–100) | 94.4 (86.4–98.5) | ||
| 1. Clinical-laboratory | (−1/11) | ≥5 | 90.0 (83.4–94.5) | 97.0 (89.5–100) | 97.3 (95.4–99.2) | 98.3 (94.0–100) |
| 2. Clinical-laboratory | 91.5 (82.5–97.0) | 92.0 (77.5–98.2) | 97.0 (88.0–99.1) | 94.0 (87.3–100) | ||
| 1. Clinical-laboratory | (−1/9) | ≥5 | 94.0 (88.1–97.3) | 95.5 (87.3–99.1) | 98.5 (97.2–100) | 98.0 (93.1–99.5) |
| 2. Clinical-laboratory | 90.1 (81.0–96.0) | 97.2 (85.5–100) | 95.5 (91.4–99.4) | 98.5 (92.0–100) |
1 Test sample; 2 Validation sample;
*The model Clinical-laboratory was composed by variables: Splenomegaly and Leukopenia. Points assigned to variables in the models: Cough = −1, leukopenia = 1, splenomegaly and IFAT = 3, L. chagasi-ELISA = 4, rK39 rapid test = 5, rK39-ELISA = 6 and DAT = 7.
Figure 1Classification and regression tree for predicting visceral leishmaniasis in patients with suggestive clinical.
Classification and regression tree model for predicting VL. The number of patients (N) and the probability of VL (% with VL) are shown at each node. Terminal nodes are shaded.
Predictive performance of different models in classification and regression trees (CART).
| Models | Sensitivity (%) (95% CI) | Specificity (%) (95% CI) | Area under ROC Curve (%) (95% CI) | Positive predictive value (%) (95% CI) |
| 1. CART | 80.4 (73.0–87.0) | 75.4 (63.5–85.0) | 84.0 (76.2–91.3) | 86.3 (79.0–92.0) |
| 2. CART | 90.1 (81.0–96.0) | 68.4 (51.3–82.5) | 86.0 (75.3–96.0) | 84.2 (74.0–92.0) |
| 1. CART | 92.0 (86.0–96.0) | 85.5 (75.0–93.0) | 94.0 (90.2–97.4) | 92.4 (86.5–96.3) |
| 2. CART | 90.1 (81.0–96.0) | 89.5 (75.2–97.0) | 95.2 (91.4–99.0) | 94.1 (86.0–98.4) |
| 1. CART | 92.5 (87.0–96.3) | 71.0 (59.0–81.3) | 94.0 (90.2–97.1) | 86.0 (79.2–91.2) |
| 2. CART | 97.2 (92.2–100) | 76.3 (60.0–89.0) | 95.0 (89.0–100) | 88.5 (79.2–95.0) |
| 1. CART | 98.0 (93.5–99.5) | 88.4 (78.4–95.0) | 97.2 (95.0–100) | 94.2 (89.0–97.5) |
| 2. CART | 96.0 (88.1–99.1) | 89.5 (75.2–97.1) | 93.4 (87.0–100) | 94.4 (86.4–98.5) |
| 1. CART | 90.2 (84.0–95.0) | 97.1 (90.0–100) | 98.0 (96.1–99.5) | 98.4 (94.2–100) |
| 2. CART | 91.5 (82.5–97.0) | 92.1 (79.0–98.3) | 94.0 (87.3–100) | 96.0 (88.0–99.1) |
| 1. CART | 94.0 (88.5–97.4) | 98.5 (92.2–100) | 99.0 (98.0–100) | 99.2 (96.0–100) |
| 2. CART | 90.1 (81.0–96.0) | 97.4 (86.2–100) | 97.3 (95.0–100) | 98.5 (92.0–100) |
1 Test sample; 2 Validation sample.
*The CART model was composed by variables: Splenomegaly, leukopenia, cough, age and weight loss.
Figure 2Example, based in models developed using logistic regression, on how a chart could be used.