Literature DB >> 22386447

Extreme challenges and advances in archaeal proteomics.

Julie A Maupin-Furlow1, Matthew A Humbard, Phillip Aaron Kirkland.   

Abstract

Archaea display amazing physiological properties that are of interest to understand at the molecular level including the ability to thrive at extreme environmental conditions, the presence of novel metabolic pathways (e.g. methanogenesis, methylaspartate cycle) and the use of eukaryotic-like protein machineries for basic cellular functions. Coupling traditional genetic and biochemical approaches with advanced technologies, such as genomics and proteomics, provides an avenue for scientists to discover new aspects related to the molecular physiology of archaea. This review emphasizes the unusual properties of archaeal proteomes and how high-throughput and specialized mass spectrometry-based proteomic studies have provided insight into the molecular properties of archaeal cells.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID： 22386447      PMCID： PMC3370060          DOI： 10.1016/j.mib.2012.02.002

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN： 1369-5274            Impact factor:   7.934


  56 in total

1.  Posttranslational modification of the 20S proteasomal proteins of the archaeon Haloferax volcanii.

Authors:  Matthew A Humbard; Stanley M Stevens; Julie A Maupin-Furlow
Journal:  J Bacteriol       Date:  2006-09-01       Impact factor: 3.490

2.  Archaeal N-terminal protein maturation commonly involves N-terminal acetylation: a large-scale proteomics survey.

Authors:  Michaela Falb; Michalis Aivaliotis; Carolina Garcia-Rizo; Birgit Bisle; Andreas Tebbe; Christian Klein; Kosta Konstantinidis; Frank Siedler; Friedhelm Pfeiffer; Dieter Oesterhelt
Journal:  J Mol Biol       Date:  2006-08-03       Impact factor: 5.469

3.  Membrane protein analysis using an improved peptic in-solution digestion protocol.

Authors:  Benjamin Rietschel; Sandra Bornemann; Tabiwang N Arrey; Dominic Baeumlisberger; Michael Karas; Bjoern Meyer
Journal:  Proteomics       Date:  2009-12       Impact factor: 3.984

4.  Size distribution of native cytosolic proteins of Thermoplasma acidophilum.

Authors:  Na Sun; Noriko Tamura; Tomohiro Tamura; Roland Wilhelm Knispel; Thomas Hrabe; Christine Kofler; Stephan Nickell; István Nagy
Journal:  Proteomics       Date:  2009-07       Impact factor: 3.984

5.  Quantitative profiling of the membrane proteome in a halophilic archaeon.

Authors:  Birgit Bisle; Alexander Schmidt; Burghardt Scheibe; Christian Klein; Andreas Tebbe; Joseph Kellermann; Frank Siedler; Friedhelm Pfeiffer; Friedrich Lottspeich; Dieter Oesterhelt
Journal:  Mol Cell Proteomics       Date:  2006-06-27       Impact factor: 5.911

6.  An unconventional pathway for reduction of CO2 to methane in CO-grown Methanosarcina acetivorans revealed by proteomics.

Authors:  Daniel J Lessner; Lingyun Li; Qingbo Li; Tomas Rejtar; Victor P Andreev; Matthew Reichlen; Kevin Hill; James J Moran; Barry L Karger; James G Ferry
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-13       Impact factor: 11.205

7.  Top-down proteomics reveals novel protein forms expressed in Methanosarcina acetivorans.

Authors:  Jonathan T Ferguson; Craig D Wenger; William W Metcalf; Neil L Kelleher
Journal:  J Am Soc Mass Spectrom       Date:  2009-06-06       Impact factor: 3.109

8.  Proteomics of Pyrococcus furiosus, a hyperthermophilic archaeon refractory to traditional methods.

Authors:  Alice M Lee; Joel R Sevinsky; Jonathan L Bundy; Amy M Grunden; James L Stephenson
Journal:  J Proteome Res       Date:  2009-08       Impact factor: 4.466

9.  Comparative study of the extracellular proteome of Sulfolobus species reveals limited secretion.

Authors:  Albert F Ellen; Sonja-Verena Albers; Arnold J M Driessen
Journal:  Extremophiles       Date:  2009-12-02       Impact factor: 2.395

10.  Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii.

Authors:  Matthew A Humbard; Hugo V Miranda; Jae-Min Lim; David J Krause; Jonathan R Pritz; Guangyin Zhou; Sixue Chen; Lance Wells; Julie A Maupin-Furlow
Journal:  Nature       Date:  2010-01-07       Impact factor: 49.962
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  3 in total

Review 1.  Post-translation modification in Archaea: lessons from Haloferax volcanii and other haloarchaea.

Authors:  Jerry Eichler; Julie Maupin-Furlow
Journal:  FEMS Microbiol Rev       Date:  2012-12-20       Impact factor: 16.408

2.  Proteomic Sample Preparation and Data Analysis in Line with the Archaeal Proteome Project.

Authors:  Stefan Schulze; Mechthild Pohlschroder
Journal:  Methods Mol Biol       Date:  2022

3.  The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics.

Authors:  Stefan Schulze; Zachary Adams; Micaela Cerletti; Rosana De Castro; Sébastien Ferreira-Cerca; Christian Fufezan; María Inés Giménez; Michael Hippler; Zivojin Jevtic; Robert Knüppel; Georgio Legerme; Christof Lenz; Anita Marchfelder; Julie Maupin-Furlow; Roberto A Paggi; Friedhelm Pfeiffer; Ansgar Poetsch; Henning Urlaub; Mechthild Pohlschroder
Journal:  Nat Commun       Date:  2020-06-19       Impact factor: 14.919
  3 in total

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