Literature DB >> 22379969

Cost-effective HLA-Cw06:02 typing in a Caucasian population.

Pernilla Nikamo, Mona Ståhle.   

Abstract

Considering the clinical and genetic heterogeneity of psoriasis which may translate into distinct disease pathology and treatment response, correct typing of the main candidate gene HLA-C is critical but not trivial. To facilitate genotyping, we compared established techniques with our newly developed tool. Here, we propose that typing of four single nucleotide polymorphic markers within the HLA-C region correctly determines HLA-Cw*06:02 genotypes in psoriatic cases and healthy controls in a population of Caucasian origin. Typing of the SNPs presented herein proved to be precise, reliable, time and cost effective, and requiring low amount of DNA.
© 2011 John Wiley & Sons A/S.

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Year:  2012        PMID: 22379969     DOI: 10.1111/j.1600-0625.2011.01423.x

Source DB:  PubMed          Journal:  Exp Dermatol        ISSN: 0906-6705            Impact factor:   3.960


  5 in total

1.  Association with Genetic Variants in the IL-23 and NF-κB Pathways Discriminates between Mild and Severe Psoriasis Skin Disease.

Authors:  Pernilla Nikamo; Josefin Lysell; Mona Ståhle
Journal:  J Invest Dermatol       Date:  2015-03-19       Impact factor: 8.551

2.  Genetic association with ERAP1 in psoriasis is confined to disease onset after puberty and not dependent on HLA-C*06.

Authors:  Josefin Lysell; Leonid Padyukov; Ingrid Kockum; Pernilla Nikamo; Mona Ståhle
Journal:  J Invest Dermatol       Date:  2012-08-30       Impact factor: 8.551

3.  Association of genetic variants with self-assessed color categories in Brazilians.

Authors:  Danielle Fernandes Durso; Sergio Paulo Bydlowski; Mara Helena Hutz; Guilherme Suarez-Kurtz; Tiago R Magalhães; Sérgio Danilo Junho Pena
Journal:  PLoS One       Date:  2014-01-08       Impact factor: 3.240

4.  A single SNP surrogate for genotyping HLA-C*06:02 in diverse populations.

Authors:  Philip E Stuart; Trilokraj Tejasvi; Pakeeza A Shaiq; Preya Kullavanijaya; Raheel Qamar; Ghazala K Raja; Yanming Li; John J Voorhees; Gonçalo R Abecasis; James T Elder; Rajan P Nair
Journal:  J Invest Dermatol       Date:  2014-12-10       Impact factor: 8.551

5.  Intracellular signalling pathways and cytoskeletal functions converge on the psoriasis candidate gene CCHCR1 expressed at P-bodies and centrosomes.

Authors:  Mari H Tervaniemi; Shintaro Katayama; Tiina Skoog; H Annika Siitonen; Jyrki Vuola; Kristo Nuutila; Kristiina Tammimies; Sari Suomela; Esko Kankuri; Juha Kere; Outi Elomaa
Journal:  BMC Genomics       Date:  2018-06-04       Impact factor: 3.969

  5 in total

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