Literature DB >> 22369873

Application of computational toxicological approaches in human health risk assessment. I. A tiered surrogate approach.

Nina Ching Yi Wang1, Q Jay Zhao, Scott C Wesselkamper, Jason C Lambert, Dan Petersen, Janet K Hess-Wilson.   

Abstract

Hazard identification and dose-response assessment for chemicals of concern found in various environmental media are typically based on epidemiological and/or animal toxicity data. However, human health risk assessments are often requested for many compounds found at contaminated sites throughout the US that have limited or no available toxicity information from either humans or animals. To address this issue, recent efforts have focused on expanding the use of structure-activity relationships (SAR) approaches to identify appropriate surrogates and/or predict toxicological phenotype(s) and associated adverse effect levels. A tiered surrogate approach (i.e., decision tree) based on three main types of surrogates (structural, metabolic, and toxicity-like) has been developed. To select the final surrogate chemical and its surrogate toxicity value(s), a weight-of-evidence approach based on the proposed decision tree is applied. In addition, a case study with actual toxicity data serves as the evaluation to support our tiered surrogate approach. Future work will include case studies demonstrating the utility of the surrogate approach under different scenarios for data-poor chemicals. In conclusion, our surrogate approach provides a reasonable starting point for identifying potential toxic effects, target organs, and/or modes-of-action, and for selecting surrogate chemicals from which to derive either reference or risk values. Published by Elsevier Inc.

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Year:  2012        PMID: 22369873     DOI: 10.1016/j.yrtph.2012.02.006

Source DB:  PubMed          Journal:  Regul Toxicol Pharmacol        ISSN: 0273-2300            Impact factor:   3.271


  12 in total

1.  A case study on the application of an expert-driven read-across approach in support of quantitative risk assessment of p,p'-dichlorodiphenyldichloroethane.

Authors:  Lucina E Lizarraga; Jeffry L Dean; J Phillip Kaiser; Scott C Wesselkamper; Jason C Lambert; Q Jay Zhao
Journal:  Regul Toxicol Pharmacol       Date:  2019-02-19       Impact factor: 3.271

2.  The Next Generation Blueprint of Computational Toxicology at the U.S. Environmental Protection Agency.

Authors:  Russell S Thomas; Tina Bahadori; Timothy J Buckley; John Cowden; Chad Deisenroth; Kathie L Dionisio; Jeffrey B Frithsen; Christopher M Grulke; Maureen R Gwinn; Joshua A Harrill; Mark Higuchi; Keith A Houck; Michael F Hughes; E Sidney Hunter; Kristin K Isaacs; Richard S Judson; Thomas B Knudsen; Jason C Lambert; Monica Linnenbrink; Todd M Martin; Seth R Newton; Stephanie Padilla; Grace Patlewicz; Katie Paul-Friedman; Katherine A Phillips; Ann M Richard; Reeder Sams; Timothy J Shafer; R Woodrow Setzer; Imran Shah; Jane E Simmons; Steven O Simmons; Amar Singh; Jon R Sobus; Mark Strynar; Adam Swank; Rogelio Tornero-Valez; Elin M Ulrich; Daniel L Villeneuve; John F Wambaugh; Barbara A Wetmore; Antony J Williams
Journal:  Toxicol Sci       Date:  2019-06-01       Impact factor: 4.849

3.  Extending the Generalised Read-Across approach (GenRA): A systematic analysis of the impact of physicochemical property information on read-across performance.

Authors:  George Helman; Imran Shah; Grace Patlewicz
Journal:  Comput Toxicol       Date:  2018

4.  Exploring current read-across applications and needs among selected U.S. Federal Agencies.

Authors:  Grace Patlewicz; Lucina E Lizarraga; Diego Rua; David G Allen; Amber B Daniel; Suzanne C Fitzpatrick; Natàlia Garcia-Reyero; John Gordon; Pertti Hakkinen; Angela S Howard; Agnes Karmaus; Joanna Matheson; Moiz Mumtaz; Andrea-Nicole Richarz; Patricia Ruiz; Louis Scarano; Takashi Yamada; Nicole Kleinstreuer
Journal:  Regul Toxicol Pharmacol       Date:  2019-05-10       Impact factor: 3.271

5.  Editor's Highlight: Application of Gene Set Enrichment Analysis for Identification of Chemically Induced, Biologically Relevant Transcriptomic Networks and Potential Utilization in Human Health Risk Assessment.

Authors:  Jeffry L Dean; Q Jay Zhao; Jason C Lambert; Belinda S Hawkins; Russell S Thomas; Scott C Wesselkamper
Journal:  Toxicol Sci       Date:  2017-05-01       Impact factor: 4.849

6.  Comparing the performance and coverage of selected in silico (liver) metabolism tools relative to reported studies in the literature to inform analogue selection in read-across: A case study.

Authors:  Matthew Boyce; Brian Meyer; Chris Grulke; Lucina Lizarraga; Grace Patlewicz
Journal:  Comput Toxicol       Date:  2022-02-01

Review 7.  Integrative approaches for predicting in vivo effects of chemicals from their structural descriptors and the results of short-term biological assays.

Authors:  Yen Sia Low; Alexander Yeugenyevich Sedykh; Ivan Rusyn; Alexander Tropsha
Journal:  Curr Top Med Chem       Date:  2014       Impact factor: 3.295

8.  Integrative chemical-biological read-across approach for chemical hazard classification.

Authors:  Yen Low; Alexander Sedykh; Denis Fourches; Alexander Golbraikh; Maurice Whelan; Ivan Rusyn; Alexander Tropsha
Journal:  Chem Res Toxicol       Date:  2013-08-05       Impact factor: 3.739

9.  Internationalization of read-across as a validated new approach method (NAM) for regulatory toxicology.

Authors:  Costanza Rovida; Tara Barton-Maclaren; Emilio Benfenati; Francesca Caloni; P. Charukeshi Chandrasekera; Christophe Chesné; Mark T D Cronin; Joop De Knecht; Daniel R Dietrich; Sylvia E Escher; Suzanne Fitzpatrick; Brenna Flannery; Matthias Herzler; Susanne Hougaard Bennekou; Bruno Hubesch; Hennicke Kamp; Jaffar Kisitu; Nicole Kleinstreuer; Simona Kovarich; Marcel Leist; Alexandra Maertens; Kerry Nugent; Giorgia Pallocca; Manuel Pastor; Grace Patlewicz; Manuela Pavan; Octavio Presgrave; Lena Smirnova; Michael Schwarz; Takashi Yamada; Thomas Hartung
Journal:  ALTEX       Date:  2020-04-30       Impact factor: 6.250

10.  A framework for the next generation of risk science.

Authors:  Daniel Krewski; Margit Westphal; Melvin E Andersen; Gregory M Paoli; Weihsueh A Chiu; Mustafa Al-Zoughool; Maxine C Croteau; Lyle D Burgoon; Ila Cote
Journal:  Environ Health Perspect       Date:  2014-04-11       Impact factor: 9.031

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