Literature DB >> 22369354

Comparison of ternary bilayer mixtures with asymmetric or symmetric unsaturated phosphatidylcholine lipids by coarse grained molecular dynamics simulations.

C Rosetti1, C Pastorino.   

Abstract

We studied the phase behavior of various ternary bilayer mixtures composed of cholesterol, an unsaturated lipid, and a fully saturated lipid, by means of molecular dynamics simulations of the MARTINI coarse grain model. We aimed at comparing lateral organization and local properties of bilayers containing phosphatidylcholine (PC) lipids, either with two unsaturated tails (symmetric), or one unsaturated and one saturated tail (asymmetric), as the low-melting component of the mixture. The number of unsaturations per chain was systematically varied in both classes of unsaturated lipids, to account for its consequences in segregation. In the asymmetric unsaturated PCs, the saturated tail was kept identical to the hydrophobic chains of the fully saturated lipid component. Membranes with a symmetric or an asymmetric unsaturated lipid, with the same kind of unsaturated chain, show different phase behavior. Symmetric polyunsaturated PCs set the separation in two phases. Instead, the asymmetric polyunsaturated lipids induced nonideal mixing of components in single-phase bilayers. A significative drop of temperature, within the accessible temperature range, enhances the segregation in mixtures with the more unsaturated asymmetric PC, but still within a single phase. This different phase behavior between membranes with symmetric and asymmetric unsaturated PCs is also observed for lipids with the same total number of unsaturations. On the other hand, the degree of unsaturation per se enhances the segregation, by increasing the composition fluctuations in single-phase membranes with asymmetric PC lipids, and raising the line tension in the two-phase bilayer mixtures with symmetric polyunsaturated PCs. Dynamic clusters of unsaturated asymmetric lipids can be identified. The clusters show no correlation between leaflets, as observed for the phase domains in mixtures with the symmetric polyunsaturated PCs. Interestingly, we found that asymmetric PC lipids have a preferential orientation such that their saturated tails increase their density toward the periphery of the clusters, facing regions enriched in the fully saturated lipids and cholesterol. The degree of unsaturation increases the cluster size and also enhances the anisotropy of the orientation. The surface density of cholesterol follows a gradient that favors its interaction with the saturated tails. Such gradients in composition lead to gradients in order parameters, such as the conformational order and the area of the tails, which increases away from the unsaturated lipid clusters. We compared, in addition, differences in hydrophobic length mismatch between acyl chains of the low-melting and high-melting components, in mixtures containing either symmetric or asymmetric unsaturated lipids.

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Year:  2012        PMID: 22369354     DOI: 10.1021/jp212406u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  12 in total

1.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

2.  Multiscale modeling of four-component lipid mixtures: domain composition, size, alignment, and properties of the phase interface.

Authors:  David G Ackerman; Gerald W Feigenson
Journal:  J Phys Chem B       Date:  2015-01-22       Impact factor: 2.991

3.  Regimes of Complex Lipid Bilayer Phases Induced by Cholesterol Concentration in MD Simulation.

Authors:  George A Pantelopulos; John E Straub
Journal:  Biophys J       Date:  2018-10-19       Impact factor: 4.033

4.  Domain Stability in Biomimetic Membranes Driven by Lipid Polyunsaturation.

Authors:  Xubo Lin; Joseph H Lorent; Allison D Skinkle; Kandice R Levental; M Neal Waxham; Alemayehu A Gorfe; Ilya Levental
Journal:  J Phys Chem B       Date:  2016-11-10       Impact factor: 2.991

5.  Interactions between fengycin and model bilayers quantified by coarse-grained molecular dynamics.

Authors:  Joshua N Horn; Aaron Cravens; Alan Grossfield
Journal:  Biophys J       Date:  2013-10-01       Impact factor: 4.033

6.  Critical size dependence of domain formation observed in coarse-grained simulations of bilayers composed of ternary lipid mixtures.

Authors:  George A Pantelopulos; Tetsuro Nagai; Asanga Bandara; Afra Panahi; John E Straub
Journal:  J Chem Phys       Date:  2017-09-07       Impact factor: 3.488

7.  Parameterization of a coarse-grained model of cholesterol with point-dipole electrostatics.

Authors:  P Siani; H Khandelia; M Orsi; L G Dias
Journal:  J Comput Aided Mol Des       Date:  2018-09-26       Impact factor: 3.686

Review 8.  Computational Modeling of Realistic Cell Membranes.

Authors:  Siewert J Marrink; Valentina Corradi; Paulo C T Souza; Helgi I Ingólfsson; D Peter Tieleman; Mark S P Sansom
Journal:  Chem Rev       Date:  2019-01-09       Impact factor: 72.087

9.  Lipid Raft Size and Lipid Mobility in Non-raft Domains Increase during Aging and Are Exacerbated in APP/PS1 Mice Model of Alzheimer's Disease. Predictions from an Agent-Based Mathematical Model.

Authors:  Guido Santos; Mario Díaz; Néstor V Torres
Journal:  Front Physiol       Date:  2016-03-15       Impact factor: 4.566

10.  Model parameters for simulation of physiological lipids.

Authors:  Ronald D Hills; Nicholas McGlinchey
Journal:  J Comput Chem       Date:  2016-02-11       Impact factor: 3.376

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