Literature DB >> 22356151

Emergent diversity in an open-ended evolving virtual community.

Jose D Fernández1, Daniel Lobo, Gema M Martín, René Doursat, Francisco J Vico.   

Abstract

Understanding the dynamics of biodiversity has become an important line of research in theoretical ecology and, in particular, conservation biology. However, studying the evolution of ecological communities under traditional modeling approaches based on differential calculus requires species' characteristics to be predefined, which limits the generality of the results. An alternative but less standardized methodology relies on intensive computer simulation of evolving communities made of simple, explicitly described individuals. We study here the formation, evolution, and diversity dynamics of a community of virtual plants with a novel individual-centered model involving three different scales: the genetic, the developmental, and the physiological scales. It constitutes an original attempt at combining development, evolution, and population dynamics (based on multi-agent interactions) into one comprehensive, yet simple model. In this world, we observe that our simulated plants evolve increasingly elaborate canopies, which are capable of intercepting ever greater amounts of light. Generated morphologies vary from the simplest one-branch structure of promoter plants to a complex arborization of several hundred thousand branches in highly evolved variants. On the population scale, the heterogeneous spatial structuration of the plant community at each generation depends solely on the evolution of its component plants. Using this virtual data, the morphologies and the dynamics of diversity production were analyzed by various statistical methods, based on genotypic and phenotypic distance metrics. The results demonstrate that diversity can spontaneously emerge in a community of mutually interacting individuals under the influence of specific environmental conditions.

Mesh:

Year:  2012        PMID: 22356151     DOI: 10.1162/artl_a_00059

Source DB:  PubMed          Journal:  Artif Life        ISSN: 1064-5462            Impact factor:   0.667


  3 in total

1.  Defining and simulating open-ended novelty: requirements, guidelines, and challenges.

Authors:  Wolfgang Banzhaf; Bert Baumgaertner; Guillaume Beslon; René Doursat; James A Foster; Barry McMullin; Vinicius Veloso de Melo; Thomas Miconi; Lee Spector; Susan Stepney; Roger White
Journal:  Theory Biosci       Date:  2016-05-19       Impact factor: 1.919

Review 2.  Synthetic living machines: A new window on life.

Authors:  Mo R Ebrahimkhani; Michael Levin
Journal:  iScience       Date:  2021-05-04

3.  Physiological inputs regulate species-specific anatomy during embryogenesis and regeneration.

Authors:  Kelly G Sullivan; Maya Emmons-Bell; Michael Levin
Journal:  Commun Integr Biol       Date:  2016-07-15
  3 in total

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